RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 DGKGP49619 791 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 GEMIN4P57678 1058 aaKnown RBP9.57□□□□□ -0.88
VTA1-201ENST00000367621 RHOAP61586 193 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 ECT2LQ008S8 904 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 SULT2A1Q06520 285 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 KBTBD12Q3ZCT8 623 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 PCID2Q5JVF3 399 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 AHI1Q8N157 1196 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 KRT222Q8N1A0 295 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 MZB1Q8WU39 189 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 DCAKDQ8WVC6 231 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 SLC44A1Q8WWI5 657 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 SORCS1Q8WY21 1168 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 NXPE3Q969Y0 559 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 MFSD3Q96ES6 412 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 NECTIN4Q96NY8 510 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 SMIM14Q96QK8 99 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 RANBP9Q96S59 729 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 CYTH2Q99418 400 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 NAT9Q9BTE0 207 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 TDRD1Q9BXT4 1180 aaKnown RBP9.57□□□□□ -0.88
VTA1-201ENST00000367621 KRTAP4-6Q9BYQ5 205 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 CEP44Q9C0F1 390 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 TNKS2Q9H2K2 1166 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 UGT1A7Q9HAW7 530 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 UGT1A10Q9HAW8 530 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 UGT1A8Q9HAW9 530 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 MRM3Q9HC36 420 aaKnown RBP9.57□□□□□ -0.88
VTA1-201ENST00000367621 TREX1Q9NSU2 369 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 THG1LQ9NWX6 298 aaKnown RBP9.57□□□□□ -0.88
VTA1-201ENST00000367621 VPS18Q9P253 973 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 PRKAG3Q9UGI9 489 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 SLC2A6Q9UGQ3 507 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 SLC24A2Q9UI40 661 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 HCN2Q9UL51 889 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 ERVW-1Q9UQF0 538 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 TCAF1Q9Y4C2 921 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 PCDHGC4Q9Y5F7 938 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 RAI2Q9Y5P3 530 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 RPS6KL1Q9Y6S9 549 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 FAM169AQ9Y6X4 670 aa9.57□□□□□ -0.88
VTA1-201ENST00000367621 C2orf16Q68DN1 1984 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 EXOC1LA0A1B0GW35 172 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 ANTXRLA6NF34 631 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 SMIM23A6NLE4 172 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 HTRA2O43464 458 aaPredicted RBP9.56□□□□□ -0.88
VTA1-201ENST00000367621 LDB2O43679 373 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 USP1O94782 785 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 GSRP00390 522 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 FGF1P05230 155 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 HLA-DPA1P20036 260 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 ADRA1DP25100 572 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 PSMA3P25788 255 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 STX2P32856 288 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 GJA4P35212 333 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 ARCN1P48444 511 aaKnown RBP9.56□□□□□ -0.88
VTA1-201ENST00000367621 AP1S1P61966 158 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 RUNX3Q13761 415 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 GALNT3Q14435 633 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 POU6F1Q14863 301 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 PTPRRQ15256 657 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 DLG2Q15700 870 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 KLHL38Q2WGJ6 581 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 MYLK3Q32MK0 819 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 SPANXN3Q5MJ09 141 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 EMC10Q5UCC4 262 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 ARMC3Q5W041 872 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 KCTD16Q68DU8 428 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 CASC4Q6P4E1 433 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 C22orf39Q6P5X5 142 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 ZNF449Q6P9G9 518 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 EP400NLQ6ZTU2 488 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 CAMK1DQ8IU85 385 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 MICALL1Q8N3F8 863 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 OR2AP1Q8NGE2 309 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 TTC8Q8TAM2 541 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 WFIKKN2Q8TEU8 576 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 CYB5D2Q8WUJ1 264 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 RUFY1Q96T51 708 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 PAFAH2Q99487 392 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 CCDC77Q9BR77 488 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 MCMBPQ9BTE3 642 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 FSD1LQ9BXM9 530 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 TM6SF2Q9BZW4 377 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 ELOVL2Q9NXB9 296 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 GTSE1Q9NYZ3 720 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 SLC17A6Q9P2U8 582 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 EVLQ9UI08 416 aaPredicted RBP9.56□□□□□ -0.88
VTA1-201ENST00000367621 NOVA2Q9UNW9 492 aaKnown RBP9.56□□□□□ -0.88
VTA1-201ENST00000367621 CHKBQ9Y259 395 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 KCTD3Q9Y597 815 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 SPO11Q9Y5K1 396 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 NUMBLQ9Y6R0 609 aa9.56□□□□□ -0.88
VTA1-201ENST00000367621 HELZP42694 1942 aaKnown RBP9.56□□□□□ -0.88
VTA1-201ENST00000367621 HMX2A2RU54 273 aa9.55□□□□□ -0.88
VTA1-201ENST00000367621 TTC34A8MYJ7 566 aa9.55□□□□□ -0.88
VTA1-201ENST00000367621 HMGB1P1B2RPK0 211 aaPredicted RBP9.55□□□□□ -0.88
VTA1-201ENST00000367621 WASH3PC4AMC7 463 aa9.55□□□□□ -0.88
VTA1-201ENST00000367621 POC1B-GALNT4F8VUJ3 575 aa9.55□□□□□ -0.88
VTA1-201ENST00000367621 CDH16O75309 829 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms