RNA–Protein interactions for RNA: ENST00000363904.1

RNU6-478P-201, Transcript of RNA, U6 small nuclear 478, pseudogene, humanhuman

BASIC

Gene RNU6-478P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-478P-201ENST00000363904 OVCA2Q8WZ82 227 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 NUS1Q96E22 293 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 MAGED4Q96JG8 741 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 C1orf147Q96MC9 270 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 MSTO1Q9BUK6 570 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 MXD3Q9BW11 206 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 A1CFQ9NQ94 594 aaKnown RBP-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 HERC5Q9UII4 1024 aaKnown RBP-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 PADI1Q9ULC6 663 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 PCDHB7Q9Y5E2 793 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 PTCH1Q13635 1447 aa-0.16□□□□□ -2.44
RNU6-478P-201ENST00000363904 SMCHD1A6NHR9 2005 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 TNPO2O14787 897 aaKnown RBP-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 SYNGR3O43761 229 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 IDH3BO43837 385 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 DTNBO60941 627 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 KAT7O95251 611 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 CLPTM1O96005 669 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 ASNSP08243 561 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 SOX3P41225 446 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 HALP42357 657 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 GSTM5P46439 218 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 EPHB1P54762 984 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 NKX6-1P78426 367 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 FUT7Q11130 342 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 STRN3Q13033 797 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 SERINC3Q13530 473 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 PKP1Q13835 747 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 EBI3Q14213 229 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 SLC29A2Q14542 456 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 KCNAB1Q14722 419 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 PUM3Q15397 648 aaKnown RBP-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 SGSM1Q2NKQ1 1148 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 TMEM196Q5HYL7 178 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 FAM171A1Q5VUB5 890 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 SHFQ7M4L6 423 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 DPP9Q86TI2 863 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 SLC25A42Q86VD7 318 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 TPRX1Q8N7U7 411 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 PRSS33Q8NF86 280 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 MIPOL1Q8TD10 442 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 LMF2Q9BU23 707 aaKnown RBP-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 RXFP3Q9NSD7 469 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 ABCD2Q9UBJ2 740 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 PAXBP1Q9Y5B6 917 aa-0.17□□□□□ -2.44
RNU6-478P-201ENST00000363904 NID2Q14112 1375 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 C11orf97A0A1B0GVM6 126 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 TCRBV7S3A2A0A539 114 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 TRIM75PA6NK02 468 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 SOCS6O14544 535 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 HSPA12AO43301 675 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 WISP3O95389 354 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 NR3C1P04150 777 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 MAPK9P45984 424 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 RHAGQ02094 409 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 LRRC63Q05C16 580 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 HNRNPDQ14103 355 aaKnown RBP-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 P3H1Q32P28 736 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 PLK5Q496M5 336 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 ARHGEF16Q5VV41 709 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 CCDC144NLQ6NUI1 221 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 WDR93Q6P2C0 686 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 Q6P435 159 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 PGM2L1Q6PCE3 622 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 MFSD6Q6ZSS7 791 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 DDX46Q7L014 1031 aaKnown RBP-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 RNF113BQ8IZP6 322 aaKnown RBP-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 CLASRPQ8N2M8 674 aaKnown RBP-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 OR56A3Q8NH54 315 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 CEP70Q8NHQ1 597 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 KBTBD7Q8WVZ9 684 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 ESAMQ96AP7 390 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 PRAC1Q96KF2 57 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 NSMCE3Q96MG7 304 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 SYT17Q9BSW7 474 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 STK31Q9BXU1 1019 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 SLC13A1Q9BZW2 595 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 TMX4Q9H1E5 349 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 CERS4Q9HA82 394 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 GNB4Q9HAV0 340 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 MKS1Q9NXB0 559 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 C1RLQ9NZP8 487 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 IL17CQ9P0M4 197 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 ZNF319Q9P2F9 582 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 SERPINB13Q9UIV8 391 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 HPSEQ9Y251 543 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 AMDHD2Q9Y303 409 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 JRKLQ9Y4A0 524 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 KIAA1210Q9ULL0 1709 aa-0.18□□□□□ -2.44
RNU6-478P-201ENST00000363904 IGKV2-28A0A075B6P5 120 aa-0.19□□□□□ -2.44
RNU6-478P-201ENST00000363904 TRIM49BA6NDI0 452 aa-0.19□□□□□ -2.44
RNU6-478P-201ENST00000363904 DDTLA6NHG4 134 aaPredicted RBP-0.19□□□□□ -2.44
RNU6-478P-201ENST00000363904 AKR1B15C9JRZ8 316 aaPredicted RBP-0.19□□□□□ -2.44
RNU6-478P-201ENST00000363904 XPOTO43592 962 aaKnown RBP-0.19□□□□□ -2.44
RNU6-478P-201ENST00000363904 ZIC3O60481 467 aa-0.19□□□□□ -2.44
RNU6-478P-201ENST00000363904 TRMUO75648 421 aaKnown RBP-0.19□□□□□ -2.44
RNU6-478P-201ENST00000363904 IGKV2D-28P01615 120 aa-0.19□□□□□ -2.44
RNU6-478P-201ENST00000363904 RAF1P04049 648 aa-0.19□□□□□ -2.44
RNU6-478P-201ENST00000363904 PRKCHP24723 683 aa-0.19□□□□□ -2.44
RNU6-478P-201ENST00000363904 STX2P32856 288 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms