RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 PRAMEP78395 509 aa20.18■□□□□ 0.82
CHD1L-201ENST00000361293 NSUN2Q08J23 767 aaKnown RBP eCLIP20.18■□□□□ 0.82
CHD1L-201ENST00000361293 C1orf146Q5VVC0 180 aa20.18■□□□□ 0.82
CHD1L-201ENST00000361293 FAM219BQ5XKK7 198 aa20.18■□□□□ 0.82
CHD1L-201ENST00000361293 TMEM198Q66K66 360 aa20.18■□□□□ 0.82
CHD1L-201ENST00000361293 TMEM207Q6UWW9 146 aa20.18■□□□□ 0.82
CHD1L-201ENST00000361293 PIM3Q86V86 326 aa20.18■□□□□ 0.82
CHD1L-201ENST00000361293 DNAJC1Q96KC8 554 aaKnown RBP20.18■□□□□ 0.82
CHD1L-201ENST00000361293 ZNF512Q96ME7 567 aaPredicted RBP20.18■□□□□ 0.82
CHD1L-201ENST00000361293 PRICKLE1Q96MT3 831 aaPredicted RBP20.18■□□□□ 0.82
CHD1L-201ENST00000361293 LENG8Q96PV6 779 aaPredicted RBP20.18■□□□□ 0.82
CHD1L-201ENST00000361293 MFSD1Q9H3U5 465 aa20.18■□□□□ 0.82
CHD1L-201ENST00000361293 GPAMQ9HCL2 828 aa20.18■□□□□ 0.82
CHD1L-201ENST00000361293 ACSL4O60488 711 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 COX4I1P13073 169 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 RGRP47804 291 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 PRKAA2P54646 552 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 ACTR3P61158 418 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 SMARCB1Q12824 385 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 PDCD2Q16342 344 aaPredicted RBP20.17■□□□□ 0.82
CHD1L-201ENST00000361293 DENND1CQ8IV53 801 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 EFCAB3Q8N7B9 438 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 OR13C4Q8NGS5 318 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 CFAP61Q8NHU2 1237 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 CMTM5Q96DZ9 223 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 IFT43Q96FT9 208 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 TMEM175Q9BSA9 504 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 MRPL9Q9BYD2 267 aaKnown RBP20.17■□□□□ 0.82
CHD1L-201ENST00000361293 NMRK1Q9NWW6 199 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 STX18Q9P2W9 335 aaKnown RBP20.17■□□□□ 0.82
CHD1L-201ENST00000361293 STOML1Q9UBI4 398 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 DNMT3LQ9UJW3 386 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 CRYL1Q9Y2S2 319 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 H3BNC9 293 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 PITPNM1O00562 1244 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 PDE5AO76074 875 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 KLKB1P03952 638 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 HNRNPLP14866 589 aaKnown RBP eCLIP20.17■□□□□ 0.824e-10■■□□□ 14.2
CHD1L-201ENST00000361293 ITGAXP20702 1163 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 ATP5C1P36542 298 aaKnown RBP20.17■□□□□ 0.82
CHD1L-201ENST00000361293 PLK1P53350 603 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 CUL3Q13618 768 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 TRMT5Q32P41 509 aaKnown RBP20.17■□□□□ 0.82
CHD1L-201ENST00000361293 FSCBQ5H9T9 825 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 TRIM67Q6ZTA4 783 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 KDM1BQ8NB78 822 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 COMMD8Q9NX08 183 aa20.17■□□□□ 0.82
CHD1L-201ENST00000361293 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.17■□□□□ 0.82
CHD1L-201ENST00000361293 F8W8V4 182 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 CIB2O75838 187 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 EPHB1P54762 984 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 GNA12Q03113 381 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 SLC34A1Q06495 639 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 SEMA3AQ14563 771 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 PPM1LQ5SGD2 360 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 METTL21CQ5VZV1 264 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 SLC8B1Q6J4K2 584 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 C2orf15Q8WU43 125 aaKnown RBP20.16■□□□□ 0.82
CHD1L-201ENST00000361293 NAF1Q96HR8 494 aaKnown RBP20.16■□□□□ 0.82
CHD1L-201ENST00000361293 EXOC2Q96KP1 924 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 UBXN10Q96LJ8 280 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 NACA2Q9H009 215 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 TNFRSF12AQ9NP84 129 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 GKN1Q9NS71 199 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 SSX2IPQ9Y2D8 614 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 COCHO43405 550 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 SEC24AO95486 1093 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 SLC14A2Q15849 920 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 FAM83EQ2M2I3 478 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 C5orf22Q49AR2 442 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 IL31Q6EBC2 164 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.16■□□□□ 0.822e-8■■■■■ 29.1
CHD1L-201ENST00000361293 DEFB128Q7Z7B8 93 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 LRRC43Q8N309 656 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 FEM1CQ96JP0 617 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 MARK4Q96L34 752 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 UNC93B1Q9H1C4 597 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 MTRRQ9UBK8 725 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 VWA7Q9Y334 891 aa20.16■□□□□ 0.82
CHD1L-201ENST00000361293 ZNF840PA6NDX5 716 aa20.15■□□□□ 0.82
CHD1L-201ENST00000361293 GOT2P00505 430 aaKnown RBP20.15■□□□□ 0.82
CHD1L-201ENST00000361293 LTA4HP09960 611 aaKnown RBP20.15■□□□□ 0.82
CHD1L-201ENST00000361293 ATP5F1P24539 256 aaPredicted RBP20.15■□□□□ 0.82
CHD1L-201ENST00000361293 KPNA1P52294 538 aaPredicted RBP20.15■□□□□ 0.82
CHD1L-201ENST00000361293 DEFB107AQ8IZN7 70 aa20.15■□□□□ 0.82
CHD1L-201ENST00000361293 WBP2Q969T9 261 aa20.15■□□□□ 0.82
CHD1L-201ENST00000361293 SPON2Q9BUD6 331 aa20.15■□□□□ 0.82
CHD1L-201ENST00000361293 PPP1R12CQ9BZL4 782 aa20.15■□□□□ 0.82
CHD1L-201ENST00000361293 A8MT66 165 aa20.15■□□□□ 0.82
CHD1L-201ENST00000361293 HOXA2O43364 376 aa20.15■□□□□ 0.82
CHD1L-201ENST00000361293 WISP3O95389 354 aaPredicted RBP20.15■□□□□ 0.82
CHD1L-201ENST00000361293 EFEMP2O95967 443 aa20.15■□□□□ 0.82
CHD1L-201ENST00000361293 PRSS56P0CW18 603 aa20.15■□□□□ 0.82
CHD1L-201ENST00000361293 ARSAP15289 507 aa20.15■□□□□ 0.82
CHD1L-201ENST00000361293 KCNC1P48547 511 aa20.15■□□□□ 0.82
CHD1L-201ENST00000361293 ATN1P54259 1190 aaPredicted RBP20.15■□□□□ 0.82
CHD1L-201ENST00000361293 PFKPQ01813 784 aa20.15■□□□□ 0.82
CHD1L-201ENST00000361293 EML3Q32P44 896 aa20.15■□□□□ 0.82
CHD1L-201ENST00000361293 SH2D4BQ5SQS7 431 aa20.15■□□□□ 0.82
CHD1L-201ENST00000361293 GPR158Q5T848 1215 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms