RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 PHOX2BQ99453 314 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 WRAP53Q9BUR4 548 aaKnown RBP17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 MLPHQ9BV36 600 aaPredicted RBP17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 FAM153AQ9UHL3 310 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 LRRC72A6NJI9 287 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 AREL1O15033 823 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 PHF2O75151 1096 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 MAOBP27338 520 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 PAFAH1B1P43034 410 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 DHPSP49366 369 aaPredicted RBP17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 EPHB1P54762 984 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 P3H1Q32P28 736 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 SEL1L3Q68CR1 1132 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 PMS2CLQ68D20 193 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 KDELC1Q6UW63 502 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 C12orf50Q8NA57 414 aaPredicted RBP17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 ATL2Q8NHH9 583 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 SNX19Q92543 992 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 BIRC7Q96CA5 298 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 MRGPRX2Q96LB1 330 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 EPC1Q9H2F5 836 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 GOLGA8CPA6NN73 597 aa17.98■□□□□ 0.47
PDLIM7-202ENST00000355841 RIOK3O14730 519 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-202ENST00000355841 RNGTTO60942 597 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-202ENST00000355841 IGHV4-34P06331 123 aa17.98■□□□□ 0.47
PDLIM7-202ENST00000355841 RPL22P35268 128 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-202ENST00000355841 POLR2LP62875 67 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-202ENST00000355841 CDK18Q07002 472 aa17.98■□□□□ 0.47
PDLIM7-202ENST00000355841 SPARCL1Q14515 664 aa17.98■□□□□ 0.47
PDLIM7-202ENST00000355841 ELF2Q15723 593 aa17.98■□□□□ 0.47
PDLIM7-202ENST00000355841 KLHL7Q8IXQ5 586 aa17.98■□□□□ 0.47
PDLIM7-202ENST00000355841 RAB7BQ96AH8 199 aa17.98■□□□□ 0.47
PDLIM7-202ENST00000355841 IFT43Q96FT9 208 aa17.98■□□□□ 0.47
PDLIM7-202ENST00000355841 TRIB3Q96RU7 358 aa17.98■□□□□ 0.47
PDLIM7-202ENST00000355841 APOL2Q9BQE5 337 aa17.98■□□□□ 0.47
PDLIM7-202ENST00000355841 IRF2BPLQ9H1B7 796 aa17.98■□□□□ 0.47
PDLIM7-202ENST00000355841 PHTF1Q9UMS5 762 aa17.98■□□□□ 0.47
PDLIM7-202ENST00000355841 ZFR2Q9UPR6 939 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-202ENST00000355841 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.98■□□□□ 0.47
PDLIM7-202ENST00000355841 SLCO1B1Q9Y6L6 691 aa17.98■□□□□ 0.47
PDLIM7-202ENST00000355841 PLXND1Q9Y4D7 1925 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 A0A1W2PQU0 124 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 METTL12A8MUP2 240 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 MMP20O60882 483 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 ZNF189O75820 626 aaPredicted RBP17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 AGTP01019 485 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 PIRTP0C851 137 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 CA4P22748 312 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 CHRNA4P43681 627 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 VPS41P49754 854 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 TERF1P54274 439 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 PRPSAP1Q14558 356 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 PARP6Q2NL67 630 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 KIAA0895LQ68EN5 471 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 ERAP2Q6P179 960 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 SLC25A41Q8N5S1 370 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 RMDN1Q96DB5 314 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 ZC3H10Q96K80 434 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 EBF2Q9HAK2 575 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 PREBQ9HCU5 417 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 B4GALT6Q9UBX8 382 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 SMG5Q9UPR3 1016 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 GON4LQ3T8J9 2241 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 FANCMQ8IYD8 2048 aa17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 ATXN2Q99700 1313 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-202ENST00000355841 IGLON5A6NGN9 336 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 NPIPB15A6NHN6 443 aaPredicted RBP17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 MEI4A8MW99 385 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 AP1G1O43747 822 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 USP12O75317 370 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 ANXA9O76027 345 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 ITPKAP23677 461 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 ACTN2P35609 894 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 HNF1BP35680 557 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 MMP12P39900 470 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 NBL1P41271 181 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 GEMP55040 296 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 NHLH1Q02575 133 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 MPP3Q13368 585 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 QPCTQ16769 361 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 TSPAN33Q86UF1 283 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 C11orf74Q86VG3 221 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 CADM4Q8NFZ8 388 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 SPOCK2Q92563 424 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 FICDQ9BVA6 458 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 FSD1LQ9BXM9 530 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 KDM4CQ9H3R0 1056 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 ETNK1Q9HBU6 452 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 VPS45Q9NRW7 570 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 RNF14Q9UBS8 474 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 COQ6Q9Y2Z9 468 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 GPR179Q6PRD1 2367 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 THADAQ6YHU6 1953 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 A0A1W2PQ67 120 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 ANKRD66B4E2M5 251 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 KIF2AO00139 706 aaPredicted RBP17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 TSPAN6O43657 245 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 RHOBTB1O94844 696 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 ELP6Q0PNE2 266 aa17.96■□□□□ 0.47
PDLIM7-202ENST00000355841 RALGDSQ12967 914 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms