RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 PRKAR2AP13861 404 aaKnown RBP23.2■■□□□ 1.31
NPAS3-201ENST00000346562 CTPS1P17812 591 aa23.2■■□□□ 1.31
NPAS3-201ENST00000346562 PPIBP23284 216 aaKnown RBP23.2■■□□□ 1.31
NPAS3-201ENST00000346562 SPIBQ01892 262 aa23.2■■□□□ 1.31
NPAS3-201ENST00000346562 OR4L1Q8NH43 312 aa23.2■■□□□ 1.31
NPAS3-201ENST00000346562 MTMR9Q96QG7 549 aa23.2■■□□□ 1.31
NPAS3-201ENST00000346562 C3orf14Q9HBI5 128 aa23.2■■□□□ 1.31
NPAS3-201ENST00000346562 CLUHO75153 1309 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 SCN2BO60939 215 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 GRM5P41594 1212 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 PTCD3Q96EY7 689 aaKnown RBP23.2■■□□□ 1.3
NPAS3-201ENST00000346562 CEP170BQ9Y4F5 1589 aaPredicted RBP23.2■■□□□ 1.3
NPAS3-201ENST00000346562 A0A087X0B3 334 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 ITGAVP06756 1048 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 LAG3P18627 525 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 BRMS1LQ5PSV4 323 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 GALNT18Q6P9A2 607 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 MARK4Q96L34 752 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 RNF19AQ9NV58 838 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 DERAQ9Y315 318 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 MRPS5P82675 430 aaKnown RBP23.2■■□□□ 1.3
NPAS3-201ENST00000346562 FBXO42Q6P3S6 717 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 FAM124AQ86V42 546 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 PARGQ86W56 976 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 RAVER1Q8IY67 606 aaKnown RBP23.2■■□□□ 1.3
NPAS3-201ENST00000346562 PIWIL2Q8TC59 973 aaKnown RBP23.2■■□□□ 1.3
NPAS3-201ENST00000346562 MAGEE2Q8TD90 523 aaPredicted RBP23.2■■□□□ 1.3
NPAS3-201ENST00000346562 MKL1Q969V6 931 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 GGA2Q9UJY4 613 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 ADRB2P07550 413 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 IGFALSP35858 605 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 ABCG1P45844 678 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 OMPP47874 163 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 MRPS22P82650 360 aaKnown RBP23.2■■□□□ 1.3
NPAS3-201ENST00000346562 CHSY3Q70JA7 882 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 RP9Q8TA86 221 aaKnown RBP23.2■■□□□ 1.3
NPAS3-201ENST00000346562 ACMSDQ8TDX5 336 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 NOL6Q9H6R4 1146 aaKnown RBP23.2■■□□□ 1.3
NPAS3-201ENST00000346562 KCNMB3Q9NPA1 279 aa23.2■■□□□ 1.3
NPAS3-201ENST00000346562 ERAL1O75616 437 aaKnown RBP23.19■■□□□ 1.3
NPAS3-201ENST00000346562 ZSCAN5DPP0CG00 497 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 MC4RP32245 332 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 NET1Q7Z628 596 aaPredicted RBP23.19■■□□□ 1.3
NPAS3-201ENST00000346562 TRPV3Q8NET8 790 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 ERGIC3Q9Y282 383 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 ARHGAP23Q9P227 1491 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 SCAMP3O14828 347 aaKnown RBP23.19■■□□□ 1.3
NPAS3-201ENST00000346562 FARP2O94887 1054 aaPredicted RBP23.19■■□□□ 1.3
NPAS3-201ENST00000346562 FGFR3P22607 806 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 TGFBR2P37173 567 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 ACTR3P61158 418 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 HES2Q9Y543 173 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 KHDRBS3O75525 346 aaKnown RBP23.19■■□□□ 1.3
NPAS3-201ENST00000346562 CRADDP78560 199 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 CDK18Q07002 472 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 PPP3CAQ08209 521 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 TAF5Q15542 800 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 GPR180Q86V85 440 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 COPS8Q99627 209 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 KCNN2Q9H2S1 579 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 CNGB3Q9NQW8 809 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 SEMA3GQ9NS98 782 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 RBM7Q9Y580 266 aaKnown RBP23.19■■□□□ 1.3
NPAS3-201ENST00000346562 PCDHGB3Q9Y5G1 929 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 COL1A2P08123 1366 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 TBC1D3DA0A087WVF3 549 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 TBC1D3IA0A087WXS9 549 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 TBC1D3EA0A087X179 549 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 TBC1D3KA0A087X1G2 549 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 TBC1D3FA6NER0 549 aaPredicted RBP23.19■■□□□ 1.3
NPAS3-201ENST00000346562 TBC1D3LB9A6J9 549 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 NEDD8-MDP1E9PL57 170 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 IFNGP01579 166 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 TBC1D3HP0C7X1 549 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 SRP54P61011 504 aaKnown RBP23.19■■□□□ 1.3
NPAS3-201ENST00000346562 CAPSQ13938 189 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 KLHL12Q53G59 568 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 TBC1D3GQ6DHY5 549 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 TBC1D3CQ6IPX1 549 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 TBC1D3Q8IZP1 549 aaPredicted RBP23.19■■□□□ 1.3
NPAS3-201ENST00000346562 FAM98AQ8NCA5 519 aaKnown RBP23.19■■□□□ 1.3
NPAS3-201ENST00000346562 CLCC1Q96S66 551 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 CLIC5Q9NZA1 410 aa23.19■■□□□ 1.3
NPAS3-201ENST00000346562 LOC100506127A0A0U1RQW1 187 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 TISP43B9A030 160 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 SLC28A2O43868 658 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 BUD31P41223 144 aaPredicted RBP23.18■■□□□ 1.3
NPAS3-201ENST00000346562 USP46P62068 366 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 FKBP1BP68106 108 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 NOGQ13253 232 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 PHF13Q86YI8 300 aaPredicted RBP23.18■■□□□ 1.3
NPAS3-201ENST00000346562 ZNF563Q8TA94 476 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 PPCDCQ96CD2 204 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 PDCD10Q9BUL8 212 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 TLR10Q9BXR5 811 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 NCANO14594 1321 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 OR10H3O60404 316 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 CRTC3Q6UUV7 619 aa23.18■■□□□ 1.3
NPAS3-201ENST00000346562 AENQ8WTP8 325 aaKnown RBP23.18■■□□□ 1.3
NPAS3-201ENST00000346562 LINGO1Q96FE5 620 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms