RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 TPRP12270 2363 aaKnown RBP16.18■□□□□ 0.18
ATG4B-201ENST00000344376 CHD8Q9HCK8 2581 aa16.18■□□□□ 0.18
ATG4B-201ENST00000344376 LRRD1A4D1F6 860 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 CFAP69A5D8W1 941 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 FAM221BA6H8Z2 402 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 TMEM8BA6NDV4 472 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 TRAFD1O14545 582 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-201ENST00000344376 RFPL3O75679 317 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 CSF2P04141 144 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 PROS1P07225 676 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 ELFN1P0C7U0 828 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 NME1P15531 152 aaKnown RBP16.17■□□□□ 0.18
ATG4B-201ENST00000344376 KDELR1P24390 212 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 SLC1A1P43005 524 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 IRF4Q15306 451 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 TP53I13Q8NBR0 393 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-201ENST00000344376 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-201ENST00000344376 PDCD6IPQ8WUM4 868 aaKnown RBP16.17■□□□□ 0.18
ATG4B-201ENST00000344376 FAF2Q96CS3 445 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 MRFAP1L1Q96HT8 127 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 NT5MQ9NPB1 228 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 COQ6Q9Y2Z9 468 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 C1QTNF9BB2RNN3 333 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 FFAR2O15552 330 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 CPP00450 1065 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 PRKCGP05129 697 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 C1QTNF9P0C862 333 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 CR2P20023 1033 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 CYLC1P35663 651 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-201ENST00000344376 MAGEA1P43355 309 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 ZNF75DP51815 510 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 ITKQ08881 620 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 DNAJC3Q13217 504 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 ZNF211Q13398 564 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-201ENST00000344376 TCEAL1Q15170 157 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 SPA17Q15506 151 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 ZNF542PQ5EBM4 170 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 LRRC38Q5VT99 294 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 DPPA4Q7L190 304 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 VSIG1Q86XK7 387 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 CCDC170Q8IYT3 715 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 SLC25A45Q8N413 288 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 PGBD5Q8N414 524 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 OR4C6Q8NH72 309 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 BTN2A2Q8WVV5 523 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 SPOCK2Q92563 424 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 RAPGEF5Q92565 580 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 GATA6Q92908 595 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 MAK16Q9BXY0 300 aaKnown RBP16.17■□□□□ 0.18
ATG4B-201ENST00000344376 POLR1EQ9GZS1 481 aaKnown RBP16.17■□□□□ 0.18
ATG4B-201ENST00000344376 RBSNQ9H1K0 784 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 NOD2Q9HC29 1040 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 MBNL1Q9NR56 388 aaKnown RBP16.17■□□□□ 0.18
ATG4B-201ENST00000344376 EVA1BQ9NVM1 165 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 UCKL1Q9NWZ5 548 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 PCDHGC4Q9Y5F7 938 aa16.17■□□□□ 0.18
ATG4B-201ENST00000344376 TTC24A2A3L6 582 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-201ENST00000344376 ZNF487B1APH4 448 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 MATN3O15232 486 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 HTRA2O43464 458 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-201ENST00000344376 SPOPO43791 374 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 KRT1P04264 644 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 KRT10P13645 584 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 JUNDP17535 347 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 CKMT2P17540 419 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 CCNCP24863 283 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 HTR1BP28222 390 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 NOP2P46087 812 aaKnown RBP16.16■□□□□ 0.18
ATG4B-201ENST00000344376 ACADVLP49748 655 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 MAXP61244 160 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 DAB2P98082 770 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 ILKQ13418 452 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 AGERQ15109 404 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 MACC1Q6ZN28 852 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 TMPRSS7Q7RTY8 843 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 RHOT1Q8IXI2 618 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 TEX26Q8N6G2 289 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 PQLC3Q8N755 202 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 ATL2Q8NHH9 583 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 FATE1Q969F0 183 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 RNF157Q96PX1 679 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 DUSP23Q9BVJ7 150 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 DDX56Q9NY93 547 aaKnown RBP16.16■□□□□ 0.18
ATG4B-201ENST00000344376 NLGN3Q9NZ94 848 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 AMACRQ9UHK6 382 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 DOCK9Q9BZ29 2069 aa16.16■□□□□ 0.18
ATG4B-201ENST00000344376 TRIM38O00635 465 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 SCAMP1O15126 338 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 SIGLEC6O43699 453 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 MAP3K6O95382 1288 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 CES1P23141 567 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 PEX5P50542 639 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 SEMG2Q02383 582 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 GBE1Q04446 702 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 RALGDSQ12967 914 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 WSCD2Q2TBF2 565 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 PROX2Q3B8N5 592 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 ARMC12Q5T9G4 340 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 DHRS13Q6UX07 377 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 CCNI2Q6ZMN8 369 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms