RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 A8MT66 165 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 EOMESO95936 686 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 PEX2P28328 305 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 POLD2P49005 469 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 KPNA2P52292 529 aaKnown RBP14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 GPR158Q5T848 1215 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 AGAP9Q5VTM2 703 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 PIWIL4Q7Z3Z4 852 aaKnown RBP14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 RNF180Q86T96 592 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 ARHGAP18Q8N392 663 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 RYBPQ8N488 228 aaPredicted RBP14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 SNX31Q8N9S9 440 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 CALML6Q8TD86 181 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 CNDP1Q96KN2 507 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 NPAS2Q99743 824 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 ALG9Q9H6U8 611 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 ATP13A1Q9HD20 1204 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 ARL5AQ9Y689 179 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 SLCO1B7G3V0H7 640 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 MUSKO15146 869 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 LTA4HP09960 611 aaKnown RBP14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 THOP1P52888 689 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 NKX3-2P78367 333 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 TRIP10Q15642 601 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 KIAA0408Q6ZU52 694 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 ABI1Q8IZP0 508 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 JADE3Q92613 823 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 TMA16Q96EY4 203 aaKnown RBP14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 ARNT2Q9HBZ2 717 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 MIA3Q5JRA6 1907 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 ZCCHC18P0CG32 403 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 SP100P23497 879 aaPredicted RBP14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 LEPRP48357 1165 aaKnown RBP14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 CLCN5P51795 746 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 SULT2A1Q06520 285 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 TRIP4Q15650 581 aaPredicted RBP14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 KLC3Q6P597 504 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 RSPO2Q6UXX9 243 aaPredicted RBP14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 RP9Q8TA86 221 aaKnown RBP14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 GDPD5Q8WTR4 605 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 IFT43Q96FT9 208 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 TBATAQ96M53 351 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 GLT1D1Q96MS3 346 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 EBF3Q9H4W6 596 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 VPS45Q9NRW7 570 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 SCOCQ9UIL1 159 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 CDH23Q9H251 3354 aa14.97□□□□□ -0.01
VIPAS39-202ENST00000343765 SDHDO14521 159 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 INPPL1O15357 1258 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 NPHS1O60500 1241 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 TCN1P20061 433 aaPredicted RBP14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 KCNQ1P51787 676 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 ART3Q13508 389 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 LBRQ14739 615 aaKnown RBP14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 SFT2D3Q587I9 215 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 TRAF7Q6Q0C0 670 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 TMEM207Q6UWW9 146 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 C16orf89Q6UX73 402 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 RNF19BQ6ZMZ0 732 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 BNC2Q6ZN30 1099 aaPredicted RBP14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 GK5Q6ZS86 529 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 OR52K2Q8NGK3 314 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 ARRDC2Q8TBH0 407 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 DNAJC1Q96KC8 554 aaKnown RBP14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 ZBTB26Q9HCK0 441 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 TLR8Q9NR97 1041 aaKnown RBP14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 VWA7Q9Y334 891 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 MAP3K13O43283 966 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 IPO13O94829 963 aaKnown RBP14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 ATXN1LP0C7T5 689 aaKnown RBP14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 XRCC1P18887 633 aaPredicted RBP14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 CST5P28325 142 aaPredicted RBP14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 PEX19P40855 299 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 HK2P52789 917 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 DUSP4Q13115 394 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 MSLNQ13421 630 aaPredicted RBP14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 ZNF235Q14590 738 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 PPP1R3AQ16821 1122 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 MAP3K21Q5TCX8 1036 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 ZNF385DQ9H6B1 395 aa14.96□□□□□ -0.01
VIPAS39-202ENST00000343765 MYCP01106 439 aaPredicted RBP14.96□□□□□ -0.02
VIPAS39-202ENST00000343765 DNAJB1P25685 340 aa14.96□□□□□ -0.02
VIPAS39-202ENST00000343765 DPP6P42658 865 aa14.96□□□□□ -0.02
VIPAS39-202ENST00000343765 C1QTNF8P60827 252 aa14.96□□□□□ -0.02
VIPAS39-202ENST00000343765 PFKPQ01813 784 aa14.96□□□□□ -0.02
VIPAS39-202ENST00000343765 SERINC3Q13530 473 aa14.96□□□□□ -0.02
VIPAS39-202ENST00000343765 CLEC6AQ6EIG7 209 aa14.96□□□□□ -0.02
VIPAS39-202ENST00000343765 NADSYN1Q6IA69 706 aa14.96□□□□□ -0.02
VIPAS39-202ENST00000343765 CUZD1Q86UP6 607 aa14.96□□□□□ -0.02
VIPAS39-202ENST00000343765 CPSF7Q8N684 471 aaKnown RBP14.96□□□□□ -0.02
VIPAS39-202ENST00000343765 OR13C4Q8NGS5 318 aa14.96□□□□□ -0.02
VIPAS39-202ENST00000343765 PDCD6IPQ8WUM4 868 aaKnown RBP14.96□□□□□ -0.02
VIPAS39-202ENST00000343765 TSPAN17Q96FV3 270 aa14.96□□□□□ -0.02
VIPAS39-202ENST00000343765 CCDC28BQ9BUN5 200 aa14.96□□□□□ -0.02
VIPAS39-202ENST00000343765 VCXQ9H320 206 aa14.96□□□□□ -0.02
VIPAS39-202ENST00000343765 WDR41Q9HAD4 459 aa14.96□□□□□ -0.02
VIPAS39-202ENST00000343765 DONSONQ9NYP3 566 aa14.96□□□□□ -0.02
VIPAS39-202ENST00000343765 PDE4DIPQ5VU43 2346 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms