RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 PCDHGC4Q9Y5F7 938 aa13.6□□□□□ -0.23
TMEM248-201ENST00000341567 TMEM88BA6NKF7 163 aa13.6□□□□□ -0.23
TMEM248-201ENST00000341567 DLGAP3O95886 979 aa13.6□□□□□ -0.23
TMEM248-201ENST00000341567 KRT8P05787 483 aa13.6□□□□□ -0.23
TMEM248-201ENST00000341567 AFF1P51825 1210 aaKnown RBP13.6□□□□□ -0.23
TMEM248-201ENST00000341567 PTPRNQ16849 979 aa13.6□□□□□ -0.23
TMEM248-201ENST00000341567 VARS2Q5ST30 1063 aaKnown RBP13.6□□□□□ -0.23
TMEM248-201ENST00000341567 CDCA2Q69YH5 1023 aaPredicted RBP13.6□□□□□ -0.23
TMEM248-201ENST00000341567 DHRSXQ8N5I4 330 aa13.6□□□□□ -0.23
TMEM248-201ENST00000341567 ROGDIQ9GZN7 287 aa13.6□□□□□ -0.23
TMEM248-201ENST00000341567 TMEM216Q9P0N5 145 aa13.6□□□□□ -0.23
TMEM248-201ENST00000341567 KPNA3O00505 521 aaPredicted RBP13.59□□□□□ -0.23
TMEM248-201ENST00000341567 PMM2O15305 246 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 TIPRLO75663 272 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 HSPA14Q0VDF9 509 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 DGCR6Q14129 220 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 AAGABQ6PD74 315 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 TP53INP2Q8IXH6 220 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 SEC14L1Q92503 715 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 ESAMQ96AP7 390 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 ADGRE3Q9BY15 652 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 PSMD13Q9UNM6 376 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 LRRC42Q9Y546 428 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 A0A087WXM4 84 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 RTN3O95197 1032 aaPredicted RBP13.59□□□□□ -0.23
TMEM248-201ENST00000341567 PCNAP12004 261 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 MZF1P28698 734 aaPredicted RBP13.59□□□□□ -0.23
TMEM248-201ENST00000341567 GATMP50440 423 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 PTP4A2Q12974 167 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 NUMA1Q14980 2115 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 MILR1Q7Z6M3 343 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 GIPC3Q8TF64 312 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 IGFLR1Q9H665 355 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 NOL11Q9H8H0 719 aaKnown RBP13.59□□□□□ -0.23
TMEM248-201ENST00000341567 GKN1Q9NS71 199 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 BTRCQ9Y297 605 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 PCDHB12Q9Y5F1 795 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 STYXL1Q9Y6J8 313 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 TK2O00142 265 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 ZSCAN9O15535 394 aaPredicted RBP13.59□□□□□ -0.23
TMEM248-201ENST00000341567 TBL1XO60907 577 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 MPOP05164 745 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 NMBRP28336 390 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 RETSATQ6NUM9 610 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 FAM43BQ6ZT52 329 aaPredicted RBP13.59□□□□□ -0.23
TMEM248-201ENST00000341567 FBXO39Q8N4B4 442 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 TRPC4APQ8TEL6 797 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 SLC35F5Q8WV83 523 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 CD101Q93033 1021 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 TMEM209Q96SK2 561 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 VAT1Q99536 393 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 STRA6Q9BX79 667 aa13.59□□□□□ -0.23
TMEM248-201ENST00000341567 FAM149AA5PLN7 773 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 ZNF197O14709 1029 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 F2P00734 622 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 AMHP03971 560 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 RBP1P09455 135 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 CYP2C18P33260 490 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 ACTR3P61158 418 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 SLC25A11Q02978 314 aaKnown RBP13.58□□□□□ -0.24
TMEM248-201ENST00000341567 DLG1Q12959 904 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 OLFML1Q6UWY5 402 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 GK5Q6ZS86 529 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 IGDCC3Q8IVU1 814 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 ZNF781Q8N8C0 355 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 PSMG2Q969U7 264 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 TBATAQ96M53 351 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 C7orf26Q96N11 449 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 GLOD4Q9HC38 313 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 SEPT3Q9UH03 358 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 NDUFAF1Q9Y375 327 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 F5P12259 2224 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 LTBP3Q9NS15 1303 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 LZTS3O60299 673 aaPredicted RBP13.58□□□□□ -0.24
TMEM248-201ENST00000341567 ITGALP20701 1170 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 SLC7A2P52569 658 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 P3H2Q8IVL5 708 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 DSELQ8IZU8 1212 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 PNPLA1Q8N8W4 532 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 SLC7A6OSQ96CW6 309 aaPredicted RBP13.58□□□□□ -0.24
TMEM248-201ENST00000341567 ACTR8Q9H981 624 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 CIDEBQ9UHD4 219 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 DERAQ9Y315 318 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 SLX4Q8IY92 1834 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 LAMA4Q16363 1823 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 TGDSO95455 350 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 PSMB9P28065 219 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 GRB14Q14449 540 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 ATP6AP1LQ52LC2 224 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 SAMD4BQ5PRF9 694 aaKnown RBP13.58□□□□□ -0.24
TMEM248-201ENST00000341567 TMEM198Q66K66 360 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 CCDC103Q8IW40 242 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 TTPALQ9BTX7 342 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 TAS2R13Q9NYV9 303 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 COPG2Q9UBF2 871 aa13.58□□□□□ -0.24
TMEM248-201ENST00000341567 CFAP99D6REC4 459 aa13.57□□□□□ -0.24
TMEM248-201ENST00000341567 FFAR3O14843 346 aa13.57□□□□□ -0.24
TMEM248-201ENST00000341567 BIRC5O15392 142 aa13.57□□□□□ -0.24
TMEM248-201ENST00000341567 GPR42O15529 346 aa13.57□□□□□ -0.24
TMEM248-201ENST00000341567 H2AFYO75367 372 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms