RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 SFMBT1Q9UHJ3 866 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 CHRNGP07510 517 aa18.91■□□□□ 0.62
PSPC1-201ENST00000338910 ERVK-10P10266 1014 aa18.91■□□□□ 0.62
PSPC1-201ENST00000338910 SELPP16109 830 aa18.91■□□□□ 0.62
PSPC1-201ENST00000338910 PORP16435 677 aaPredicted RBP18.91■□□□□ 0.62
PSPC1-201ENST00000338910 NELFEP18615 380 aaKnown RBP18.91■□□□□ 0.62
PSPC1-201ENST00000338910 PTPN3P26045 913 aa18.91■□□□□ 0.62
PSPC1-201ENST00000338910 GARSP41250 739 aaKnown RBP18.91■□□□□ 0.62
PSPC1-201ENST00000338910 SLC5A3P53794 718 aa18.91■□□□□ 0.62
PSPC1-201ENST00000338910 C16orf72Q14CZ0 275 aa18.91■□□□□ 0.62
PSPC1-201ENST00000338910 CELF6Q96J87 481 aaKnown RBP18.91■□□□□ 0.62
PSPC1-201ENST00000338910 PPP1R36Q96LQ0 422 aa18.91■□□□□ 0.62
PSPC1-201ENST00000338910 TBC1D13Q9NVG8 400 aa18.91■□□□□ 0.62
PSPC1-201ENST00000338910 MRPL42Q9Y6G3 142 aaKnown RBP18.91■□□□□ 0.62
PSPC1-201ENST00000338910 TYMPP19971 482 aa18.91■□□□□ 0.62
PSPC1-201ENST00000338910 DSC1Q08554 894 aa18.91■□□□□ 0.62
PSPC1-201ENST00000338910 ART3Q13508 389 aa18.91■□□□□ 0.62
PSPC1-201ENST00000338910 GPNMBQ14956 572 aa18.91■□□□□ 0.62
PSPC1-201ENST00000338910 RWDD4Q6NW29 188 aaKnown RBP18.91■□□□□ 0.62
PSPC1-201ENST00000338910 DBF4BQ8NFT6 615 aa18.91■□□□□ 0.62
PSPC1-201ENST00000338910 RMND5BQ96G75 393 aaPredicted RBP18.91■□□□□ 0.62
PSPC1-201ENST00000338910 CPNE1Q99829 537 aa18.91■□□□□ 0.62
PSPC1-201ENST00000338910 EFCAB1Q9HAE3 211 aa18.91■□□□□ 0.62
PSPC1-201ENST00000338910 ABI2Q9NYB9 513 aaPredicted RBP18.91■□□□□ 0.62
PSPC1-201ENST00000338910 NUP205Q92621 2012 aa18.91■□□□□ 0.62
PSPC1-201ENST00000338910 TTC3P53804 2025 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 USP12O75317 370 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 H2AFYO75367 372 aaKnown RBP18.9■□□□□ 0.62
PSPC1-201ENST00000338910 VAPBO95292 243 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 BMP10O95393 424 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 GRTP1Q5TC63 336 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 SDHAF4Q5VUM1 108 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 BTBD8Q5XKL5 378 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 SEL1L3Q68CR1 1132 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 CLEC14AQ86T13 490 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 FAM126BQ8IXS8 530 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 COLGALT2Q8IYK4 626 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 FAM156AQ8NDB6 213 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 HM13Q8TCT9 377 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 PGLYRP2Q96PD5 576 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 TMEM79Q9BSE2 394 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 SEMA6AQ9H2E6 1030 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 ZBTB26Q9HCK0 441 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 ADAM28Q9UKQ2 775 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 PCDHB8Q9UN66 801 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 RAP2CQ9Y3L5 183 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 TET1Q8NFU7 2136 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 ZBTB24O43167 697 aaPredicted RBP18.9■□□□□ 0.62
PSPC1-201ENST00000338910 MSI1O43347 362 aaKnown RBP18.9■□□□□ 0.62
PSPC1-201ENST00000338910 CBFA2T3O75081 653 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 C8BP07358 591 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 TCN1P20061 433 aaPredicted RBP18.9■□□□□ 0.62
PSPC1-201ENST00000338910 PFKPQ01813 784 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 TMEM198Q66K66 360 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.9■□□□□ 0.62
PSPC1-201ENST00000338910 ZSCAN18Q8TBC5 510 aaPredicted RBP18.9■□□□□ 0.62
PSPC1-201ENST00000338910 URGCPQ8TCY9 931 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 ASB9Q96DX5 294 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 RBBP8Q99708 897 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 NAT9Q9BTE0 207 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 FTHL17Q9BXU8 183 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 VPS45Q9NRW7 570 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 AP4S1Q9Y587 144 aa18.9■□□□□ 0.62
PSPC1-201ENST00000338910 TRIM38O00635 465 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 NCAM2O15394 837 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 GRID2O43424 1007 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 RPL14P50914 215 aaKnown RBP18.89■□□□□ 0.61
PSPC1-201ENST00000338910 PRMT2P55345 433 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 NAA20P61599 178 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 KRT80Q6KB66 452 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 CES3Q6UWW8 571 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 FIBCD1Q8N539 461 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 CNTD1Q8N815 330 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 GIPC3Q8TF64 312 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 SREK1Q8WXA9 508 aaKnown RBP18.89■□□□□ 0.61
PSPC1-201ENST00000338910 CERS2Q96G23 380 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 EIF2B3Q9NR50 452 aaKnown RBP18.89■□□□□ 0.61
PSPC1-201ENST00000338910 SYBUQ9NX95 663 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 EBF1Q9UH73 591 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 WDR37Q9Y2I8 494 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 TCAF2A6NFQ2 919 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 TNFRSF10BO14763 440 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 IDO1P14902 403 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 PAX3P23760 479 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 IRF9Q00978 393 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 NSUN2Q08J23 767 aaKnown RBP eCLIP18.89■□□□□ 0.61
PSPC1-201ENST00000338910 ITPRIPL1Q6GPH6 555 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 MYO1HQ8N1T3 1032 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 OR52K1Q8NGK4 314 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 STON2Q8WXE9 905 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 LRTOMTQ8WZ04 291 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 ISOC1Q96CN7 298 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 MOCOSQ96EN8 888 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 VPS50Q96JG6 964 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 DEFB118Q96PH6 123 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 ANKRD60Q9BZ19 345 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 CLK4Q9HAZ1 481 aaKnown RBP18.89■□□□□ 0.61
PSPC1-201ENST00000338910 INIPQ9NRY2 104 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 ABCC13Q9NSE7 274 aa18.89■□□□□ 0.61
PSPC1-201ENST00000338910 OXSMQ9NWU1 459 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms