RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 USP46P62068 366 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 SPATS1Q496A3 300 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 CRTC3Q6UUV7 619 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 PRR23CQ6ZRP0 262 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 SYTL5Q8TDW5 730 aaPredicted RBP7.68□□□□□ -1.18
SF3B3-201ENST00000302516 SELENOMQ8WWX9 145 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 CLPTM1LQ96KA5 538 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 MTMR9Q96QG7 549 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 RMI1Q9H9A7 625 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 ATP13A1Q9HD20 1204 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 TMEM138Q9NPI0 162 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 PLK2Q9NYY3 685 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 DNAJB4Q9UDY4 337 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 ARFGEF2Q9Y6D5 1785 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 ASTN1O14525 1302 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 A0A0X1KG70 313 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 BCKDKO14874 412 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 MAP3K6O95382 1288 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 CCNB1P14635 433 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 FGFR2P21802 821 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 SLC6A2P23975 617 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 SPIBQ01892 262 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 BCL2L1Q07817 233 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 BOP1Q14137 746 aaKnown RBP7.68□□□□□ -1.18
SF3B3-201ENST00000302516 ATG14Q6ZNE5 492 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 PLEKHH3Q7Z736 793 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 CLNKQ7Z7G1 428 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 PHC3Q8NDX5 983 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 MCFD2Q8NI22 146 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 SEMA4DQ92854 862 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 TMCO6Q96DC7 493 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 HSFY1Q96LI6 401 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 KLK14Q9P0G3 267 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 COQ6Q9Y2Z9 468 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 TULP2O00295 520 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 AZIN1O14977 448 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 RGS10O43665 173 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 CCNDBP1O95273 360 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 GPIP06744 558 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 CLCN3P51790 818 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 ARFIP1P53367 373 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 CDH4P55283 916 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 ELP6Q0PNE2 266 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 FBXO30Q8TB52 745 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 KCNMB3Q9NPA1 279 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 SEMA4BQ9NPR2 832 aaPredicted RBP7.68□□□□□ -1.18
SF3B3-201ENST00000302516 SMPD3Q9NY59 655 aaPredicted RBP7.68□□□□□ -1.18
SF3B3-201ENST00000302516 PCDHGB3Q9Y5G1 929 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 PCDHGA4Q9Y5G9 962 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 CCL15-CCL14A0A0B4J2E2 113 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 ALOX15BO15296 676 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 SRP54P61011 504 aaKnown RBP7.68□□□□□ -1.18
SF3B3-201ENST00000302516 SCN1BQ07699 218 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 CCL15Q16663 113 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 POTEHQ6S545 545 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 FNDC11Q9BVV2 318 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 KCNN2Q9H2S1 579 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 TRIM39Q9HCM9 518 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 SNX15Q9NRS6 342 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 ZNF214Q9UL59 606 aaPredicted RBP7.68□□□□□ -1.18
SF3B3-201ENST00000302516 TMA7Q9Y2S6 64 aaKnown RBP7.68□□□□□ -1.18
SF3B3-201ENST00000302516 ASMTP46597 345 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 PEX6Q13608 980 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 ACOX1Q15067 660 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 RBM20Q5T481 1227 aaKnown RBP7.67□□□□□ -1.18
SF3B3-201ENST00000302516 GCNT7Q6ZNI0 430 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 SCUBE3Q8IX30 993 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 PRELID2Q8N945 189 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 SLC2A14Q8TDB8 520 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 KAT2BQ92831 832 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 RHOJQ9H4E5 214 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 CAPN10Q9HC96 672 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 SPATA31A6Q5VVP1 1343 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 PDE2AO00408 941 aaPredicted RBP7.67□□□□□ -1.18
SF3B3-201ENST00000302516 PGRMC2O15173 223 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 AVILO75366 819 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 NR2F6P10588 404 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 RBL1P28749 1068 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 ARHGDIBP52566 201 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 TRMT11Q7Z4G4 463 aaKnown RBP7.67□□□□□ -1.18
SF3B3-201ENST00000302516 THAP5Q7Z6K1 395 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 SLC41A1Q8IVJ1 513 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 SMYD1Q8NB12 490 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 KAT5Q92993 513 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 GLT1D1Q96MS3 346 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 PNMA5Q96PV4 448 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 SLC9A7Q96T83 725 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 NXF3Q9H4D5 531 aaKnown RBP7.67□□□□□ -1.18
SF3B3-201ENST00000302516 CITO14578 2027 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 UGT2B17O75795 530 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 S100A6P06703 90 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 CSH1P0DML2 217 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 CSH2P0DML3 217 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 GSSP48637 474 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 GTF2BQ00403 316 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 PTP4A2Q12974 167 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 BLMHQ13867 455 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 GPR107Q5VW38 600 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 SPESP1Q6UW49 350 aa7.67□□□□□ -1.18
SF3B3-201ENST00000302516 TDRPQ86YL5 185 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms