RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 USE1Q9NZ43 259 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 EVLQ9UI08 416 aaPredicted RBP11.33□□□□□ -0.6
USP6NL-201ENST00000277575 ENTPD4Q9Y227 616 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 RAI2Q9Y5P3 530 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 ENO4A6NNW6 628 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 GRM6O15303 877 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 CCL16O15467 120 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 PPIGQ13427 754 aaKnown RBP eCLIP11.33□□□□□ -0.6
USP6NL-201ENST00000277575 CHMP1BQ7LBR1 199 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 OR7D4Q8NG98 312 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 ACTRT2Q8TDY3 377 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 AHCYL2Q96HN2 611 aaKnown RBP11.33□□□□□ -0.6
USP6NL-201ENST00000277575 TPD52L3Q96J77 140 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 MARK4Q96L34 752 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 PPP3R2Q96LZ3 170 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 UGT2B28Q9BY64 529 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 ARMC7Q9H6L4 198 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 BRD9Q9H8M2 597 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 ADPRHL2Q9NX46 363 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 SRRDQ9UH36 339 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 GTF2IRD1Q9UHL9 959 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 AP4S1Q9Y587 144 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 SGTAO43765 313 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 EPN2O95208 641 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 FGF19O95750 216 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 AP2A1O95782 977 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 OTCP00480 354 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 EPHA3P29320 983 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 HADHBP55084 474 aaKnown RBP11.32□□□□□ -0.6
USP6NL-201ENST00000277575 TLE2Q04725 743 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 OASLQ15646 514 aaKnown RBP11.32□□□□□ -0.6
USP6NL-201ENST00000277575 ZCCHC8Q6NZY4 707 aaKnown RBP11.32□□□□□ -0.6
USP6NL-201ENST00000277575 LINGO4Q6UY18 593 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 EID3Q8N140 333 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 TMCO5AQ8N6Q1 288 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 ITFG1Q8TB96 612 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 FUBP3Q96I24 572 aaKnown RBP eCLIP11.32□□□□□ -0.63e-6■□□□□ 10.3
USP6NL-201ENST00000277575 FBXL18Q96ME1 805 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 MECRQ9BV79 373 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 PRRG3Q9BZD7 231 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 NALCNQ8IZF0 1738 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 XRN1Q8IZH2 1706 aaKnown RBP11.32□□□□□ -0.6
USP6NL-201ENST00000277575 SMNDC1O75940 238 aaKnown RBP eCLIP11.32□□□□□ -0.6
USP6NL-201ENST00000277575 IL5RAQ01344 420 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 DSC2Q02487 901 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 MAPKAPK3Q16644 382 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 EML3Q32P44 896 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 SLC30A9Q6PML9 568 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 PRSS55Q6UWB4 352 aaPredicted RBP11.32□□□□□ -0.6
USP6NL-201ENST00000277575 APTXQ7Z2E3 356 aaKnown RBP11.32□□□□□ -0.6
USP6NL-201ENST00000277575 ECHDC2Q86YB7 292 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 C10orf107Q8IVU9 208 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 FBXO22Q8NEZ5 403 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 SPATA22Q8NHS9 363 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 NPLOC4Q8TAT6 608 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 TMEM79Q9BSE2 394 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 RNF39Q9H2S5 420 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 ASF1AQ9Y294 204 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 BTRCQ9Y297 605 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 SLC45A1Q9Y2W3 748 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 NR2E1Q9Y466 385 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 AZIN1O14977 448 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 SNRPB2P08579 225 aaKnown RBP11.32□□□□□ -0.6
USP6NL-201ENST00000277575 SLC35G4P0C7Q5 338 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 PKMP14618 531 aaKnown RBP11.32□□□□□ -0.6
USP6NL-201ENST00000277575 AMD1P17707 334 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 HNF4AP41235 474 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 RABGGTBP53611 331 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 SLC25A3Q00325 362 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 PRKG2Q13237 762 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 ZNF618Q5T7W0 954 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 CYP20A1Q6UW02 462 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 GPR141Q7Z602 305 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 FAM228AQ86W67 206 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 CDK20Q8IZL9 346 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 CLYBLQ8N0X4 340 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 PCDH19Q8TAB3 1148 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 SDCBP2Q9H190 292 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 SLC25A51Q9H1U9 297 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 TMEM245Q9H330 911 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 ATAD3AQ9NVI7 634 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 NDUFA13Q9P0J0 144 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 SLC17A7Q9P2U7 560 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 HBS1LQ9Y450 684 aaKnown RBP11.32□□□□□ -0.6
USP6NL-201ENST00000277575 GPSM3Q9Y4H4 160 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 CLOCKO15516 846 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 UNC5CO95185 931 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 CLPTM1O96005 669 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 GSNP06396 782 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 PABPC1P11940 636 aaKnown RBP11.32□□□□□ -0.6
USP6NL-201ENST00000277575 MRPS22P82650 360 aaKnown RBP11.32□□□□□ -0.6
USP6NL-201ENST00000277575 ADRM1Q16186 407 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 HLA-DQA1Q5Y7H0 255 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 TXNDC11Q6PKC3 985 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 TMEM26Q6ZUK4 368 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 ZNF567Q8N184 647 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 ARL14EPQ8N8R7 260 aaPredicted RBP11.32□□□□□ -0.6
USP6NL-201ENST00000277575 MFSD3Q96ES6 412 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 MAGEH1Q9H213 219 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 AASDHPPTQ9NRN7 309 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms