RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 ELFN1P0C7U0 828 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 COL6A2P12110 1019 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 CRATP43155 626 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 CTBP1Q13363 440 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 ZNF605Q86T29 641 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 PCDH20Q8N6Y1 951 aaKnown RBP19.05■□□□□ 0.64
PTPRE-201ENST00000254667 NKD2Q969F2 451 aaPredicted RBP19.05■□□□□ 0.64
PTPRE-201ENST00000254667 GMIPQ9P107 970 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 SOWAHBA6NEL2 793 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 BANF1O75531 89 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 SERPINI2O75830 405 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 SLC5A3P53794 718 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 CACNA2D1P54289 1103 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 XKR6Q5GH73 641 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 EPHX4Q8IUS5 362 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 ANGPT4Q9Y264 503 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 SLC27A6Q9Y2P4 619 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 PAPSS1O43252 624 aaPredicted RBP19.05■□□□□ 0.64
PTPRE-201ENST00000254667 GCATO75600 419 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 PSMG1O95456 288 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 CST3P01034 146 aaPredicted RBP19.05■□□□□ 0.64
PTPRE-201ENST00000254667 SERPINA6P08185 405 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 CTPS1P17812 591 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 JAM2P57087 298 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 COPZ1P61923 177 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 BNIP2Q12982 314 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 PRKG2Q13237 762 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 CDC73Q6P1J9 531 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 LLGL2Q6P1M3 1020 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 TRABD2AQ86V40 505 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 CAMKK1Q8N5S9 505 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 BEND7Q8N7W2 519 aaPredicted RBP19.05■□□□□ 0.64
PTPRE-201ENST00000254667 BHLHE22Q8NFJ8 381 aaPredicted RBP19.05■□□□□ 0.64
PTPRE-201ENST00000254667 NELL1Q92832 810 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 LINGO1Q96FE5 620 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 FMN2Q9NZ56 1722 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.05■□□□□ 0.64
PTPRE-201ENST00000254667 CCDC189A1A4V9 331 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 SH3BGRLO75368 114 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 SMPD1P17405 629 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 ANGPT1Q15389 498 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 RNFT2Q96EX2 444 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 AGO3Q9H9G7 860 aaKnown RBP19.04■□□□□ 0.64
PTPRE-201ENST00000254667 CACNB4O00305 520 aaPredicted RBP19.04■□□□□ 0.64
PTPRE-201ENST00000254667 RPP40O75818 363 aaKnown RBP19.04■□□□□ 0.64
PTPRE-201ENST00000254667 CCNCP24863 283 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 PKNOX1P55347 436 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 CHPFQ8IZ52 775 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 GPR25O00155 361 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 NUDT14O95848 222 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 FLT3P36888 993 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 PSME3P61289 254 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 GPR158Q5T848 1215 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 VN1R5Q7Z5H4 357 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 MAB21L3Q8N8X9 362 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 GPR152Q8TDT2 470 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 PRCCQ92733 491 aaPredicted RBP19.04■□□□□ 0.64
PTPRE-201ENST00000254667 QKIQ96PU8 341 aaKnown RBP eCLIP19.04■□□□□ 0.64
PTPRE-201ENST00000254667 TRAPPC9Q96Q05 1148 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 SYT17Q9BSW7 474 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 STXBP5LQ9Y2K9 1186 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 RPTORQ8N122 1335 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 SLC25A14O95258 325 aaPredicted RBP19.04■□□□□ 0.64
PTPRE-201ENST00000254667 ITGA2P17301 1181 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 RGS1Q08116 209 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 TCAIMQ8N3R3 496 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 CDYL2Q8N8U2 506 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 WDR36Q8NI36 951 aaKnown RBP19.04■□□□□ 0.64
PTPRE-201ENST00000254667 LRCH4O75427 683 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 PIRTP0C851 137 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 HGFP14210 728 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 IDO1P14902 403 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 SMIM11AP58511 58 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 LPCAT2Q7L5N7 544 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 PHC3Q8NDX5 983 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 KLHL5Q96PQ7 755 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 RERGLQ9H628 205 aa19.04■□□□□ 0.64
PTPRE-201ENST00000254667 NOL4O94818 638 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 EOMESO95936 686 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 TNK2Q07912 1038 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 TOP3AQ13472 1001 aaPredicted RBP19.03■□□□□ 0.64
PTPRE-201ENST00000254667 INAQ16352 499 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 CEP78Q5JTW2 689 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 NPAS4Q8IUM7 802 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 CPA6Q8N4T0 437 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 NACC2Q96BF6 587 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 KCTD15Q96SI1 283 aaPredicted RBP19.03■□□□□ 0.64
PTPRE-201ENST00000254667 PALMDQ9NP74 551 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 MYO5BQ9ULV0 1848 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 A0A087WXM4 84 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 TRIM38O00635 465 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 HOXB6P17509 224 aaKnown RBP19.03■□□□□ 0.64
PTPRE-201ENST00000254667 WARSP23381 471 aaKnown RBP19.03■□□□□ 0.64
PTPRE-201ENST00000254667 NDUFV1P49821 464 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 ZSCAN18Q8TBC5 510 aaPredicted RBP19.03■□□□□ 0.64
PTPRE-201ENST00000254667 C2orf15Q8WU43 125 aaKnown RBP19.03■□□□□ 0.64
PTPRE-201ENST00000254667 SOHLH2Q9NX45 425 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 E9PAM4 449 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 MYL12BO14950 172 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 C4BPBP20851 252 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms