RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 BORCS5Q969J3 196 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 NSMCE3Q96MG7 304 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 KLHL32Q96NJ5 620 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 MED10Q9BTT4 135 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 OSBPL10Q9BXB5 764 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 TUBA8Q9NY65 449 aaPredicted RBP9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 RAP2CQ9Y3L5 183 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 IQCA1LA6NCM1 817 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 NEMP2A6NFY4 417 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 DDHD2O94830 711 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 USP17L7P0C7H9 530 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 PIM1P11309 404 aaPredicted RBP9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 NCAM1P13591 858 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 ZNF182P17025 639 aaPredicted RBP9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 IREB2P48200 963 aaKnown RBP9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 TAF6P49848 677 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 C1QTNF8P60827 252 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 SEMA3BQ13214 749 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 LIPMQ5VYY2 423 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 BNC2Q6ZN30 1099 aaPredicted RBP9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 TMEM26Q6ZUK4 368 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 KDELC2Q7Z4H8 507 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 SETD3Q86TU7 594 aaPredicted RBP9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 ZC3HC1Q86WB0 502 aaKnown RBP9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 CCNYL1Q8N7R7 359 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 CNTD1Q8N815 330 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 ZNF419Q96HQ0 510 aaPredicted RBP9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 ZFP42Q96MM3 310 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 KATNBL1Q9H079 304 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 CREBZFQ9NS37 354 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 GDAP2Q9NXN4 497 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 TLK1Q9UKI8 766 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 POU2F3Q9UKI9 436 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 STAP1Q9ULZ2 295 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 DGKBQ9Y6T7 804 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 TRIP12Q14669 1992 aaPredicted RBP9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 MEIS3P2A8K0S8 358 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 CXCL11O14625 94 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 TOR1BO14657 336 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 TIMM44O43615 452 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 DLX3O60479 287 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 HDCP19113 662 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 POU6F1Q14863 301 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 ZNF792Q3KQV3 632 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 ZYG11AQ6WRX3 759 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 PARP8Q8N3A8 854 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 MARVELD2Q8N4S9 558 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 NXNL1Q96CM4 212 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 SLC2A13Q96QE2 648 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 RHOBTB2Q9BYZ6 727 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 GBA3Q9H227 469 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 POLR1BQ9H9Y6 1135 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 DDIT4Q9NX09 232 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 XPR1Q9UBH6 696 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 RIMS3Q9UJD0 308 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 TSC2P49815 1807 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 COL1A2P08123 1366 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 PGK1P00558 417 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 MMP3P08254 477 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 CKMT2P17540 419 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 S100A1P23297 94 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 MZF1P28698 734 aaPredicted RBP9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 YAP1P46937 504 aaKnown RBP9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 CDK9P50750 372 aaKnown RBP9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 AFF1P51825 1210 aaKnown RBP9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 XIAPP98170 497 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 NSUN2Q08J23 767 aaKnown RBP eCLIP9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 SF3B4Q15427 424 aaKnown RBP eCLIP9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 TSTD2Q5T7W7 516 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 AHI1Q8N157 1196 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 RP9Q8TA86 221 aaKnown RBP9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 DNAJB3Q8WWF6 145 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 CNDP1Q96KN2 507 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 TNIP3Q96KP6 325 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 SERPINI1Q99574 410 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 GPR22Q99680 433 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 ZBED2Q9BTP6 218 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 NAA50Q9GZZ1 169 aaKnown RBP9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 RBM38Q9H0Z9 239 aaKnown RBP9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 ZNF385DQ9H6B1 395 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 WDR41Q9HAD4 459 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 SLC38A7Q9NVC3 462 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 AURKCQ9UQB9 309 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 PRELID1Q9Y255 219 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 SLC45A1Q9Y2W3 748 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 SPO11Q9Y5K1 396 aa9.47□□□□□ -0.89
HLA-DOA-201ENST00000229829 RNF103-CHMP3A0A140T963 221 aa9.46□□□□□ -0.89
HLA-DOA-201ENST00000229829 TARM1B6A8C7 271 aa9.46□□□□□ -0.89
HLA-DOA-201ENST00000229829 HNRNPLP14866 589 aaKnown RBP eCLIP9.46□□□□□ -0.89
HLA-DOA-201ENST00000229829 CSRP3P50461 194 aa9.46□□□□□ -0.89
HLA-DOA-201ENST00000229829 NEK2P51955 445 aa9.46□□□□□ -0.89
HLA-DOA-201ENST00000229829 DNASE1L3Q13609 305 aa9.46□□□□□ -0.89
HLA-DOA-201ENST00000229829 MTX3Q5HYI7 312 aa9.46□□□□□ -0.89
HLA-DOA-201ENST00000229829 PCDH20Q8N6Y1 951 aaKnown RBP9.46□□□□□ -0.89
HLA-DOA-201ENST00000229829 ATP6V1E2Q96A05 226 aa9.46□□□□□ -0.89
HLA-DOA-201ENST00000229829 ARPC5LQ9BPX5 153 aa9.46□□□□□ -0.89
HLA-DOA-201ENST00000229829 MTG1Q9BT17 334 aaPredicted RBP9.46□□□□□ -0.89
HLA-DOA-201ENST00000229829 ATXN3LQ9H3M9 355 aa9.46□□□□□ -0.89
HLA-DOA-201ENST00000229829 COQ10BQ9H8M1 238 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms