RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 AAR2Q9Y312 384 aaKnown RBP10.05□□□□□ -0.8
USP11-201ENST00000218348 ZNF711Q9Y462 761 aa10.05□□□□□ -0.8
USP11-201ENST00000218348 SF3B1O75533 1304 aaKnown RBP eCLIP10.04□□□□□ -0.84e-7■■■■■ 86.2
USP11-201ENST00000218348 CCDC85CA6NKD9 419 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 TMEM233B4DJY2 109 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 MUSKO15146 869 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 RAMP2O60895 175 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 VNN2O95498 520 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 ATF6P18850 670 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 MPSTP25325 297 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 ARSDP51689 593 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 ATXN3P54252 364 aaPredicted RBP10.04□□□□□ -0.8
USP11-201ENST00000218348 PABPC1LQ4VXU2 614 aaKnown RBP10.04□□□□□ -0.8
USP11-201ENST00000218348 PKN3Q6P5Z2 889 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 MAELQ96JY0 434 aaKnown RBP10.04□□□□□ -0.8
USP11-201ENST00000218348 FAM161BQ96MY7 647 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 NUDCD1Q96RS6 583 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 THTPAQ9BU02 230 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.04□□□□□ -0.8
USP11-201ENST00000218348 THAP1Q9NVV9 213 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 TAS2R1Q9NYW7 299 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 ANXA9O76027 345 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 SORBS2O94875 1100 aaKnown RBP10.04□□□□□ -0.8
USP11-201ENST00000218348 NPY2RP49146 381 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 SLC12A2P55011 1212 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 TAS2R39P59534 338 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 SLC25A3Q00325 362 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 PLD1Q13393 1074 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 ZNF362Q5T0B9 420 aaPredicted RBP10.04□□□□□ -0.8
USP11-201ENST00000218348 FBXO22Q8NEZ5 403 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 SEPT8Q92599 483 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 HDAC10Q969S8 669 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 WBP2Q969T9 261 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 SKA1Q96BD8 255 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 NACC2Q96BF6 587 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 PHF21BQ96EK2 531 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 CWH43Q9H720 699 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 TLR8Q9NR97 1041 aaKnown RBP10.04□□□□□ -0.8
USP11-201ENST00000218348 TLR6Q9Y2C9 796 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 ARL5AQ9Y689 179 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 ABHD14A-ACY1A0A1B0GW23 586 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 FAM95CA0A1B0GW59 222 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 ARHGEF37A1IGU5 675 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 CBX4O00257 560 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 DCXO43602 365 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 BNIP3LO60238 219 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 TPPPO94811 219 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 BMP1P13497 986 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 HNRNPLP14866 589 aaKnown RBP eCLIP10.04□□□□□ -0.8
USP11-201ENST00000218348 ARNTP27540 789 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 EPHB1P54762 984 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 FPGSQ05932 587 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 KPNB1Q14974 876 aaKnown RBP10.04□□□□□ -0.8
USP11-201ENST00000218348 PCID2Q5JVF3 399 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 NADSYN1Q6IA69 706 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 KYAT3Q6YP21 454 aaKnown RBP10.04□□□□□ -0.8
USP11-201ENST00000218348 MAVSQ7Z434 540 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 PIM3Q86V86 326 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 ZC3HC1Q86WB0 502 aaKnown RBP10.04□□□□□ -0.8
USP11-201ENST00000218348 CCNJLQ8IV13 435 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 OR6K2Q8NGY2 324 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 PIWIL2Q8TC59 973 aaKnown RBP10.04□□□□□ -0.8
USP11-201ENST00000218348 TSNARE1Q96NA8 513 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 TTPALQ9BTX7 342 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 LRMDAQ9H2I8 198 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 INIPQ9NRY2 104 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 PLK2Q9NYY3 685 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 ATXN10Q9UBB4 475 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 XPR1Q9UBH6 696 aa10.04□□□□□ -0.8
USP11-201ENST00000218348 TMEM247A6NEH6 219 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 FGF10O15520 208 aaPredicted RBP10.03□□□□□ -0.8
USP11-201ENST00000218348 PTPN4P29074 926 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 EPHA3P29320 983 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 BMP8BP34820 402 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 SGSHP51688 502 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 GEMP55040 296 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 KLC1Q07866 573 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 ZNF235Q14590 738 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 TAF11Q15544 211 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 NEPROQ6NW34 567 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 LCA5Q86VQ0 697 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 PGBD5Q8N414 524 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 MAPK15Q8TD08 544 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 WDR60Q8WVS4 1066 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 RAB3IPQ96QF0 476 aaPredicted RBP10.03□□□□□ -0.8
USP11-201ENST00000218348 VAT1Q99536 393 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 IL12RB2Q99665 862 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 HTATIP2Q9BUP3 242 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 GATA5Q9BWX5 397 aaPredicted RBP10.03□□□□□ -0.8
USP11-201ENST00000218348 ACE2Q9BYF1 805 aaPredicted RBP10.03□□□□□ -0.8
USP11-201ENST00000218348 NUF2Q9BZD4 464 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 WWP1Q9H0M0 922 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 PRDM5Q9NQX1 630 aaPredicted RBP10.03□□□□□ -0.8
USP11-201ENST00000218348 A8MX80 341 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 ARHGEF15O94989 841 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 SERPINE1P05121 402 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 ACRP10323 421 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 SYN1P17600 705 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 SLC6A4P31645 630 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 MSX2P35548 267 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms