RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Zbtb2Q3V3W4 514 aaKnown RBP6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Heatr9Q5QNV8 569 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Mef2dQ63943 514 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 DbhQ64237 622 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Dusp16Q6PCP3 660 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Tas2r109Q7M707 316 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Wdr91Q7TMQ7 748 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Rbm12b1Q80YR9 836 aaKnown RBP6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 TbcdQ8BYA0 1196 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Ano4Q8C5H1 955 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Asb14Q8C6Y6 587 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Saysd1Q8K190 188 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 NpntQ91V88 561 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Arhgef3Q91X46 524 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Pcdhb2Q91Y00 799 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Lpin1Q91ZP3 924 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 FcrlaQ920A9 352 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Q922R1 422 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Sdcbp2Q99JZ0 292 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Wdr6Q99ME2 1125 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Cyc1Q9D0M3 325 aaKnown RBP6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Slamf8Q9D3G2 278 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Katnal2Q9D3R6 539 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Slc6a19Q9D687 634 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Cyp4v2Q9DBW0 525 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 RhojQ9ER71 214 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Angptl2Q9R045 493 aa6.32□□□□□ -1.4
Lig4-202ENSMUST00000170033 Col5a3Q9JLI2 1739 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Gm10722F6VLK5 217 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 PtgisO35074 501 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Itgb3O54890 787 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Cyp2b19O55071 492 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Krt4P07744 525 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Tfap2aP34056 437 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Aldh2P47738 519 aaKnown RBP6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Epb41P48193 858 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Shmt1P50431 478 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Ccna2P51943 422 aaKnown RBP6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Tff2Q03404 129 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Cpne7Q0VE82 557 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Ak8Q32M07 479 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Znf746Q3U133 652 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Otud5Q3U2S4 566 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Ndst1Q3UHN9 882 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Naf1Q3UMQ8 489 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Tmem26Q3UP23 366 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Lin54Q571G4 749 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Znf148Q61624 794 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Hspa1aQ61696 641 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 DazlQ64368 298 aaKnown RBP6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Paqr6Q6TCG5 343 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Ccnt2Q7TQK0 723 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Efr3aQ8BG67 819 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 AcppQ8CE08 381 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Tfb1mQ8JZM0 345 aaKnown RBP6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Serpinb10Q8K1K6 397 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Cuedc1Q8R3V6 388 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Plekhh3Q8VCE9 796 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Atp6v1b1Q91YH6 513 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Msi2Q920Q6 346 aaKnown RBP6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Tssk3Q9D2E1 268 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 CmipQ9D486 773 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Gm3404Q9D506 307 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Fam227bQ9D518 532 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Pik3cgQ9JHG7 1102 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Mtm1Q9Z2C5 603 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Gucy2dA0A0U1RPR8 1117 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Serpina3iD3Z450 408 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Atf6F6VAN0 656 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Gm8444F6XS56 118 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Gm21897J3KMP5 500 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Gm21750L7N228 499 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 KlO35082 1014 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Alx3O70137 343 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Ccnd1P25322 295 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Tac1P41539 130 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Ext2P70428 718 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Padi2Q08642 673 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Mgat3Q10470 538 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Q32M26 199 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Cyb5r2Q3KNK3 276 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Fubp3Q3TIX6 575 aaKnown RBP6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Arid5aQ3U108 590 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Dnajc1Q61712 552 aaKnown RBP6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Pdcd4Q61823 469 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Ifit3Q64345 403 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Scube3Q66PY1 993 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Gpatch2lQ6PE65 482 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Mrgprb8Q7TN51 330 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Serpina3fQ80X76 445 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Tbx10Q810F8 385 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 EmsyQ8BMB0 1264 aaKnown RBP6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Mpp7Q8BVD5 576 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 NaprtQ8CC86 538 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Trim32Q8CH72 655 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Slc35f5Q8R314 524 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 FggQ8VCM7 436 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 PpcsQ8VDG5 311 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 Vangl2Q91ZD4 521 aa6.31□□□□□ -1.4
Lig4-202ENSMUST00000170033 NelfcdQ922L6 591 aa6.31□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 25.4 ms