RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Aldh1a3Q9JHW9 512 aa14.9□□□□□ -0.02
Ushbp1-201ENSMUST00000049184 Gprc5dQ9JIL6 344 aa14.9□□□□□ -0.02
Ushbp1-201ENSMUST00000049184 1810010D01RikA0A1L1SR87 51 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Znf711A2ANX9 761 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Mybpc1D3YU50 1127 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Zfp963D3Z2T8 383 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Olfr596F8VQ26 312 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Trim15G3UY57 292 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Mmp20P57748 482 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Magee2Q52KG3 523 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Ndrg1Q62433 394 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Mysm1Q69Z66 819 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 ChpfQ6IQX7 774 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Deup1Q7M6Y5 601 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Ric8bQ80XE1 520 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Fut11Q8BHC9 489 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Elmo2Q8BHL5 732 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Msantd1Q8BIL2 278 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Sept11Q8C1B7 431 aaKnown RBP14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Cstf2tQ8C7E9 632 aaKnown RBP14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Slc35e2Q8C811 405 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Mrpl58Q8R035 206 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Acsf2Q8VCW8 615 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 SelenomQ8VHC3 145 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 PrkxQ922R0 355 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Sesn3Q9CYP7 492 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Il23aQ9EQ14 196 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Rai2Q9QVY8 529 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 SqorQ9R112 450 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Nrg4Q9WTX4 115 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Cldn3Q9Z0G9 219 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Cpxm1Q9Z100 722 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Slc22a4Q9Z306 553 aa14.89□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 XntrpcF8VQM8 1264 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Hsd17b7O88736 334 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 P01650 108 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 P01653 108 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Polr2iP60898 125 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Kcnq1P97414 668 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Cyp4f37Q3V1F1 546 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Olfr464Q5SW48 313 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Actr3bQ641P0 418 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 LdhdQ7TNG8 484 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Rnf38Q8BI21 518 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Parp9Q8CAS9 866 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Fem1cQ8CEF1 617 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Slc45a3Q8K0H7 553 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Sgpl1Q8R0X7 568 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Fbxw7Q8VBV4 629 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Ankrd49Q8VE42 238 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Prmt3Q922H1 532 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Nipsnap3bQ9CQE1 247 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Fam83dQ9D7I8 585 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Efcab12V9GXH0 673 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Gm4869A0A1B0GSG7 984 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Acnat1A2AKK5 416 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 S100zB9EJL3 99 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Adamts14E9PX39 1209 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Ercc2O08811 760 aaKnown RBP14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Per3O70361 1113 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 GhrP16882 650 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Stx1bP61264 288 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 ErfP70459 551 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Tmprss15P97435 1069 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Stt3bQ3TDQ1 823 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Glp2rQ5IXF8 512 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Gstt1Q64471 240 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Prmt6Q6NZB1 378 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Ints7Q7TQK1 966 aaKnown RBP14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Lrrc8dQ8BGR2 859 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Stx16Q8BVI5 326 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Dclre1cQ8K4J0 705 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Hid1Q8R1F6 788 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Mcoln3Q8R4F0 553 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Nol6Q8R5K4 1152 aaKnown RBP14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 B4galt3Q91YY2 395 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Tcf7l2Q924A0 459 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Serpina1fQ9DCQ7 411 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Wdr12Q9JJA4 423 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 PrebQ9WUQ2 417 aa14.88□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Smok4aA0JLX3 433 aa14.87□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Itgb3O54890 787 aa14.87□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Mup5P11591 180 aa14.87□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Lmnb1P14733 588 aaKnown RBP14.87□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Sephs2P97364 452 aa14.87□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Slc22a15Q504N2 544 aa14.87□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Khdrbs1Q60749 443 aaKnown RBP14.87□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Ifi47Q61635 420 aa14.87□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Itga2Q62469 1178 aa14.87□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Mcph1Q7TT79 822 aa14.87□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Brat1Q8C3R1 822 aa14.87□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 C8aQ8K182 587 aa14.87□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 CutalQ9D1U5 156 aa14.87□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 TrirQ9D735 173 aa14.87□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Olfr703Q9EPF5 319 aa14.87□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Ninj2Q9JL89 143 aa14.87□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 CpqQ9WVJ3 470 aa14.87□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Arid2E9Q7E2 1828 aa14.87□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Slc4a11A2AJN7 862 aa14.87□□□□□ -0.03
Ushbp1-201ENSMUST00000049184 Daw1D3Z7A5 415 aa14.87□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms