RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Pgm2A2CEK3 580 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 GnasQ6R0H7 1133 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Slitrk3Q810B9 980 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Asb2Q8K0L0 634 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Angel2Q8K1C0 544 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 GldcQ91W43 1025 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Adcy4Q91WF3 1077 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Tma16Q9CR02 221 aaKnown RBP16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Tyw5A2RSX7 315 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 4933408B17RikG3X9B4 273 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Tcea3P23881 347 aaKnown RBP16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Ccr4P51680 360 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Fdft1P53798 416 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Olfr213Q7TS32 327 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Pcdh18Q8VHR0 1134 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Camk2gQ923T9 529 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Mapk11Q9WUI1 364 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Gm14401A2ARV7 303 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Herc6F2Z461 1003 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Pknox1O70477 436 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Adora2aQ60613 410 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Zfp180Q6NZI9 655 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Dlgap2Q8BJ42 1059 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 PtgisO35074 501 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Rad51dO55230 329 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Icam1P13597 537 aaKnown RBP16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Ntrk1Q3UFB7 799 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Nt5dc3Q3UHB1 546 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Slc30a1Q60738 503 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Ybx3Q9JKB3 361 aaKnown RBP16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Slc28a2O88627 660 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Cyp2d9P11714 504 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Ssx9Q6XAS3 170 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Rbm47Q91WT8 590 aaKnown RBP16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Osbpl3Q9DBS9 855 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Wnt8bQ9WUD6 350 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Gm3147A0A0J9YU88 481 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Gm10424A0A0J9YVD0 481 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Zfp607bG3X9H3 648 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Gm7971J3QMM8 481 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Tas2r102Q7M717 329 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Usp17lbE9Q9U0 468 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Gm6356L7N2A7 188 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 NadkP58058 439 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 RogdiQ3TDK6 287 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Abcd2Q61285 741 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Hist2h2abQ64522 130 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Smg8Q8VE18 991 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Olfr2Q9QWU6 327 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Shroom3Q9QXN0 1986 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 UprtB1AVZ0 310 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Gm8126E9Q1N7 198 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Vmn2r35E9Q7U8 861 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 CidecP56198 239 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Itga11P61622 1188 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 ChatQ03059 641 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Gpsm3Q3U1Z5 159 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 PtprnQ60673 979 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Ift27Q9D0P8 186 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Zfp358E9Q8M1 571 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Rps6ka3P18654 740 aaKnown RBP16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Ero1bQ8R2E9 467 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Cep170bQ80U49 1574 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 AurkbO70126 345 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Hsf2P38533 535 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Tmem165P52875 323 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Cyp2c38P56655 490 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Cntn3Q07409 1028 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Smim24Q0VG18 120 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Tnfaip8l1Q8K288 186 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Stk32cQ8QZV4 488 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Mcoln3Q8R4F0 553 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Inpp4aQ9EPW0 939 aa16.66■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Sema6aO35464 1031 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Tulp3O88413 460 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Htr2cP34968 459 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Cyp2c65Q148B1 490 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Ldlrap1Q8C142 308 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Bcl2l12Q9D3J3 255 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Smurf2A2A5Z6 748 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Pgam2O70250 253 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Fam35aQ3UEN2 891 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 CttnQ60598 546 aaKnown RBP16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Fam53cQ8BXQ8 393 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Sox30Q8CGW4 782 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Rfwd3Q8CIK8 774 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Kbtbd2G3X9X1 623 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Capn6O35646 641 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Csf1rP09581 977 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Stat6P52633 837 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Idh2P54071 452 aaKnown RBP16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Rnf44Q3UHJ8 407 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Tbc1d24Q3UUG6 561 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Tgoln2Q62314 363 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Akap3O88987 864 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 FesP16879 822 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Bmp2P21274 394 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Glra2Q7TNC8 452 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Arl15Q8BGR6 204 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Snx15Q91WE1 337 aa16.65■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms