RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 St6galnac1Q9QZ39 526 aa16.98■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Zfp850J3QPC5 689 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Sbk3P0C5K0 361 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 ArsaP50428 506 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Armc12Q80X86 340 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Kcnv1Q8BZN2 503 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Maf1Q9D0U6 258 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Ruvbl2Q9WTM5 463 aaKnown RBP16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Rpl9-ps1S4R1R7 191 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Cdr2lA2A6T1 465 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Olfr596F8VQ26 312 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Sema3aO08665 772 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Cdkn2bP55271 130 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 TgfbiP82198 683 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 RnaselQ05921 735 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Tmc5Q32NZ6 967 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Glp2rQ5IXF8 512 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Olfr1252Q7TQZ2 314 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Mtg1Q8R2R6 326 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Fbxo21Q8VDH1 627 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 DhddsQ99KU1 333 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Dis3Q9CSH3 958 aaKnown RBP16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Ceacam3E9Q6J4 706 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Eps8Q08509 821 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Ccbe1Q3MI99 408 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 B3gntl1Q3U129 357 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Q3UJP5 209 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Grm5Q3UVX5 1203 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Pdcd4Q61823 469 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Wnt8aQ64527 354 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Zbtb5Q7TQG0 670 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Tspan18Q80WR1 248 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 TpbglQ8C013 384 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Fate1Q8CEK7 99 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Olfr677Q8VF06 312 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Retreg3Q9CQV4 466 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Dnajb4Q9D832 337 aa16.97■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Smok4aA0JLX3 433 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Olfr1200A2ATJ4 336 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Pabpc1P29341 636 aaKnown RBP16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Gpx3P46412 226 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Oas1fQ14AZ4 364 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Trappc9Q3U0M1 1148 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Fam35aQ3UEN2 891 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Ptk7Q8BKG3 1062 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Tprg1Q8CB49 279 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Ebf4Q8K4J2 599 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Olfr854Q8VFF1 315 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Paip2bQ91W45 136 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Pcdhb8Q91XZ2 779 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Ndfip2Q91ZP6 311 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Hnrnpa0Q9CX86 305 aaKnown RBP16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Spcs2Q9CYN2 226 aaKnown RBP16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Cpxm2Q9D2L5 764 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 CrotQ9DC50 612 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Map3k6Q9WTR2 1291 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 A0A1L1ST33 502 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Gm11549A0A286YD83 63 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 HgdO09173 445 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Fkbp7O54998 218 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Gpr50O88495 591 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Rpl36P47964 105 aaKnown RBP16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Polr3bP59470 1133 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Smim24Q0VG18 120 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Pik3r3Q64143 461 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Amigo1Q80ZD8 492 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Arhgap15Q811M1 481 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Pcdhb13Q91Y06 796 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Krt5Q922U2 580 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 AdprmQ99KS6 340 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Itfg1Q99KW9 610 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Osbpl10S4R1M9 766 aa16.96■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Gm28363A0A087WQW2 129 aa16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 1700031M16RikA0A087WSH0 82 aa16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Eif2b3B1AUN2 452 aaKnown RBP16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Gm2832F7AEC7 200 aa16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Gm6408J3QNG1 320 aa16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Gm3402K7N5P2 326 aa16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Timm44O35857 452 aa16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 FynP39688 537 aa16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 EdnrbP48302 442 aa16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Tubgcp3P58854 905 aa16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 RenbpP82343 430 aa16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Tll1Q62381 1013 aa16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Slc13a5Q67BT3 572 aa16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Bend6Q6PFX2 281 aa16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 QpctlQ8BH73 383 aa16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Unc93b1Q8VCW4 598 aa16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Olfr807Q8VGI9 311 aa16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Capn8Q91VA3 703 aa16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Adam33Q923W9 797 aa16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Acer3Q9D099 267 aa16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Rdh11Q9QYF1 316 aa16.96■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Cyp2w1E9Q816 493 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Cyp2j12G3UXT0 502 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Slc9a3G3X939 829 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 P01740 135 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Wnt10bP48614 389 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 Rab10P61027 200 aa16.95■□□□□ 0.3
Ctcf-201ENSMUST00000005841 EsrrgP62509 458 aa16.95■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms