RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W VMA4P22203 233 aaKnown RBP5.12□□□□□ -1.59
TRM112YNR046W GRX1P25373 110 aaKnown RBP5.12□□□□□ -1.59
TRM112YNR046W ENT3P47160 408 aa5.12□□□□□ -1.59
TRM112YNR046W SRC1Q03707 834 aa5.12□□□□□ -1.59
TRM112YNR046W TDA5Q06417 326 aaKnown RBP5.12□□□□□ -1.59
TRM112YNR046W CDC53Q12018 815 aaKnown RBP5.12□□□□□ -1.59
TRM112YNR046W HTS1P07263 546 aaKnown RBP5.11□□□□□ -1.59
TRM112YNR046W HVG1P0CE11 249 aa5.11□□□□□ -1.59
TRM112YNR046W BRN1P38170 754 aa5.11□□□□□ -1.59
TRM112YNR046W LSB6P42951 607 aa5.11□□□□□ -1.59
TRM112YNR046W YNR065CP53751 1116 aa5.11□□□□□ -1.59
TRM112YNR046W SYT1Q06836 1226 aa5.11□□□□□ -1.59
TRM112YNR046W FAL1Q12099 399 aaKnown RBP5.11□□□□□ -1.59
TRM112YNR046W PRI2P20457 528 aa5.1□□□□□ -1.59
TRM112YNR046W TFA2P36145 328 aa5.1□□□□□ -1.59
TRM112YNR046W AMN1P38285 549 aaPredicted RBP5.1□□□□□ -1.59
TRM112YNR046W ACO2P39533 789 aa5.1□□□□□ -1.59
TRM112YNR046W NEO1P40527 1151 aa5.1□□□□□ -1.59
TRM112YNR046W IOC3P43596 787 aa5.1□□□□□ -1.59
TRM112YNR046W LYS5P50113 272 aa5.1□□□□□ -1.59
TRM112YNR046W UTP22P53254 1237 aaPredicted RBP5.1□□□□□ -1.59
TRM112YNR046W RNH70P53331 553 aa5.1□□□□□ -1.59
TRM112YNR046W SIW14P53965 281 aa5.1□□□□□ -1.59
TRM112YNR046W NAN1Q02931 896 aaKnown RBP5.1□□□□□ -1.59
TRM112YNR046W SPO20Q04359 397 aa5.1□□□□□ -1.59
TRM112YNR046W HDA2Q06629 674 aa5.1□□□□□ -1.59
TRM112YNR046W CCP1P00431 361 aa5.09□□□□□ -1.59
TRM112YNR046W BAS1P22035 811 aa5.09□□□□□ -1.59
TRM112YNR046W ATG14P38270 344 aa5.09□□□□□ -1.59
TRM112YNR046W EXO5P38289 585 aa5.09□□□□□ -1.59
TRM112YNR046W SPF1P39986 1215 aaKnown RBP5.09□□□□□ -1.59
TRM112YNR046W MTR4P47047 1073 aaKnown RBP5.09□□□□□ -1.59
TRM112YNR046W TYW3P53177 273 aa5.09□□□□□ -1.59
TRM112YNR046W DOS2P54858 310 aa5.09□□□□□ -1.59
TRM112YNR046W RPN4Q03465 531 aa5.09□□□□□ -1.59
TRM112YNR046W MRP10O75012 95 aa5.08□□□□□ -1.6
TRM112YNR046W PPG1P32838 368 aa5.08□□□□□ -1.6
TRM112YNR046W RDH54P38086 958 aa5.08□□□□□ -1.6
TRM112YNR046W ARL1P38116 183 aaKnown RBP5.08□□□□□ -1.6
TRM112YNR046W YIR007WP40566 764 aa5.08□□□□□ -1.6
TRM112YNR046W GNP1P48813 663 aa5.08□□□□□ -1.6
TRM112YNR046W EEB1Q02891 456 aa5.08□□□□□ -1.6
TRM112YNR046W SPO71Q03868 1245 aa5.08□□□□□ -1.6
TRM112YNR046W BDF2Q07442 638 aa5.08□□□□□ -1.6
TRM112YNR046W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
TRM112YNR046W LYP1P32487 611 aa5.07□□□□□ -1.6
TRM112YNR046W RER2P35196 286 aa5.07□□□□□ -1.6
TRM112YNR046W SNF7P39929 240 aaKnown RBP5.07□□□□□ -1.6
TRM112YNR046W SOK2P53438 785 aaPredicted RBP5.07□□□□□ -1.6
TRM112YNR046W HAS1Q03532 505 aaKnown RBP5.07□□□□□ -1.6
TRM112YNR046W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
TRM112YNR046W EST2Q06163 884 aa5.07□□□□□ -1.6
TRM112YNR046W YIG1Q08956 461 aa5.07□□□□□ -1.6
TRM112YNR046W SLP1Q12232 587 aa5.07□□□□□ -1.6
TRM112YNR046W YLL054CQ12244 843 aa5.07□□□□□ -1.6
TRM112YNR046W HEM13P11353 328 aaKnown RBP5.06□□□□□ -1.6
TRM112YNR046W RAD4P14736 754 aa5.06□□□□□ -1.6
TRM112YNR046W AGP1P25376 633 aa5.06□□□□□ -1.6
TRM112YNR046W KNS1P32350 737 aaPredicted RBP5.06□□□□□ -1.6
TRM112YNR046W ADD66P36040 267 aa5.06□□□□□ -1.6
TRM112YNR046W GIP2P40036 548 aa5.06□□□□□ -1.6
TRM112YNR046W HUL5P53119 910 aa5.06□□□□□ -1.6
TRM112YNR046W CAF120P53836 1060 aa5.06□□□□□ -1.6
TRM112YNR046W MEC3Q02574 474 aa5.06□□□□□ -1.6
TRM112YNR046W SPO75Q07798 868 aa5.06□□□□□ -1.6
TRM112YNR046W TRP2P00899 507 aaKnown RBP5.05□□□□□ -1.6
TRM112YNR046W CIT2P08679 460 aa5.05□□□□□ -1.6
TRM112YNR046W SBA1P28707 216 aaKnown RBP5.05□□□□□ -1.6
TRM112YNR046W MRP8P35719 219 aa5.05□□□□□ -1.6
TRM112YNR046W TAT2P38967 592 aa5.05□□□□□ -1.6
TRM112YNR046W HXT13P39924 564 aa5.05□□□□□ -1.6
TRM112YNR046W TIM54P47045 478 aa5.05□□□□□ -1.6
TRM112YNR046W GCV1P48015 400 aa5.05□□□□□ -1.6
TRM112YNR046W HXT17P53631 564 aa5.05□□□□□ -1.6
TRM112YNR046W HXT15P54854 567 aa5.05□□□□□ -1.6
TRM112YNR046W ROD1Q02805 837 aa5.05□□□□□ -1.6
TRM112YNR046W SHE9Q04172 456 aa5.05□□□□□ -1.6
TRM112YNR046W UTP5Q04177 643 aaKnown RBP5.05□□□□□ -1.6
TRM112YNR046W REC8Q12188 680 aa5.05□□□□□ -1.6
TRM112YNR046W GPM1P00950 247 aaKnown RBP5.04□□□□□ -1.6
TRM112YNR046W DED1P06634 604 aaKnown RBP5.04□□□□□ -1.6
TRM112YNR046W TY1A-LR4P0C2I8 440 aaKnown RBP5.04□□□□□ -1.6
TRM112YNR046W TY1A-DR6P0CX70 440 aa5.04□□□□□ -1.6
TRM112YNR046W TY1A-ER1P0CX71 440 aa5.04□□□□□ -1.6
TRM112YNR046W TY1A-LR2P0CX72 440 aa5.04□□□□□ -1.6
TRM112YNR046W TY1A-PLP0CX73 440 aa5.04□□□□□ -1.6
TRM112YNR046W TY1A-JR1P0CX74 440 aa5.04□□□□□ -1.6
TRM112YNR046W TY1A-LR3P0CX75 440 aa5.04□□□□□ -1.6
TRM112YNR046W TY1A-ML2P0CX76 440 aa5.04□□□□□ -1.6
TRM112YNR046W PDC5P16467 563 aaKnown RBP5.04□□□□□ -1.6
TRM112YNR046W SYP1P25623 870 aaKnown RBP5.04□□□□□ -1.6
TRM112YNR046W RRP14P36080 434 aaKnown RBP5.04□□□□□ -1.6
TRM112YNR046W YKL069WP36088 180 aa5.04□□□□□ -1.6
TRM112YNR046W SPC42P36094 363 aa5.04□□□□□ -1.6
TRM112YNR046W REI1P38344 393 aaPredicted RBP5.04□□□□□ -1.6
TRM112YNR046W NEM1P38757 446 aa5.04□□□□□ -1.6
TRM112YNR046W SLS1P42900 643 aa5.04□□□□□ -1.6
TRM112YNR046W FAR11P53917 953 aa5.04□□□□□ -1.6
TRM112YNR046W RKM2Q03942 479 aa5.04□□□□□ -1.6
TRM112YNR046W TY1A-GR1Q12085 440 aa5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms