RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C MRL1Q06815 381 aa6.5□□□□□ -1.37
CUS1YMR240C HTS1P07263 546 aaKnown RBP6.49□□□□□ -1.37
CUS1YMR240C RAD27P26793 382 aa6.49□□□□□ -1.37
CUS1YMR240C EXO5P38289 585 aa6.49□□□□□ -1.37
CUS1YMR240C FET4P40988 552 aa6.49□□□□□ -1.37
CUS1YMR240C LSB6P42951 607 aa6.49□□□□□ -1.37
CUS1YMR240C YKL077WP36081 392 aa6.48□□□□□ -1.37
CUS1YMR240C RDH54P38086 958 aa6.48□□□□□ -1.37
CUS1YMR240C OPI10Q08202 246 aa6.48□□□□□ -1.37
CUS1YMR240C HEM13P11353 328 aaKnown RBP6.47□□□□□ -1.37
CUS1YMR240C VMA4P22203 233 aaKnown RBP6.47□□□□□ -1.37
CUS1YMR240C IOC3P43596 787 aa6.47□□□□□ -1.37
CUS1YMR240C SIW14P53965 281 aa6.47□□□□□ -1.37
CUS1YMR240C EEB1Q02891 456 aa6.47□□□□□ -1.37
CUS1YMR240C HDA2Q06629 674 aa6.47□□□□□ -1.37
CUS1YMR240C SRP40P32583 406 aaPredicted RBP6.46□□□□□ -1.38
CUS1YMR240C HXT13P39924 564 aa6.46□□□□□ -1.38
CUS1YMR240C NEO1P40527 1151 aa6.46□□□□□ -1.38
CUS1YMR240C HXT17P53631 564 aa6.46□□□□□ -1.38
CUS1YMR240C CAF120P53836 1060 aa6.46□□□□□ -1.38
CUS1YMR240C HXT15P54854 567 aa6.46□□□□□ -1.38
CUS1YMR240C HAS1Q03532 505 aaKnown RBP6.46□□□□□ -1.38
CUS1YMR240C NSE3Q05541 303 aa6.46□□□□□ -1.38
CUS1YMR240C STI1P15705 589 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38not detected
CUS1YMR240C KNS1P32350 737 aaPredicted RBP6.45□□□□□ -1.38
CUS1YMR240C TAT2P38967 592 aa6.45□□□□□ -1.38
CUS1YMR240C UTP22P53254 1237 aaPredicted RBP6.45□□□□□ -1.38
CUS1YMR240C YIG1Q08956 461 aa6.45□□□□□ -1.38
CUS1YMR240C TY1A-LR4P0C2I8 440 aaKnown RBP6.44□□□□□ -1.38
CUS1YMR240C TY1A-DR6P0CX70 440 aa6.44□□□□□ -1.38
CUS1YMR240C TY1A-ER1P0CX71 440 aa6.44□□□□□ -1.38
CUS1YMR240C TY1A-LR2P0CX72 440 aa6.44□□□□□ -1.38
CUS1YMR240C TY1A-PLP0CX73 440 aa6.44□□□□□ -1.38
CUS1YMR240C TY1A-JR1P0CX74 440 aa6.44□□□□□ -1.38
CUS1YMR240C TY1A-LR3P0CX75 440 aa6.44□□□□□ -1.38
CUS1YMR240C TY1A-ML2P0CX76 440 aa6.44□□□□□ -1.38
CUS1YMR240C PDC5P16467 563 aaKnown RBP6.44□□□□□ -1.38
CUS1YMR240C GRX1P25373 110 aaKnown RBP6.44□□□□□ -1.38
CUS1YMR240C ARL1P38116 183 aaKnown RBP6.44□□□□□ -1.38
CUS1YMR240C SPF1P39986 1215 aaKnown RBP6.44□□□□□ -1.38
CUS1YMR240C SOK2P53438 785 aaPredicted RBP6.44□□□□□ -1.38
CUS1YMR240C TDA5Q06417 326 aaKnown RBP6.44□□□□□ -1.38
CUS1YMR240C TY1A-GR1Q12085 440 aa6.44□□□□□ -1.38
CUS1YMR240C FAL1Q12099 399 aaKnown RBP6.44□□□□□ -1.38
CUS1YMR240C SLP1Q12232 587 aa6.44□□□□□ -1.38
CUS1YMR240C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.44□□□□□ -1.38
CUS1YMR240C TY1A-OLQ92392 440 aaKnown RBP6.44□□□□□ -1.38
CUS1YMR240C GPM1P00950 247 aaKnown RBP6.43□□□□□ -1.38
CUS1YMR240C PRI2P20457 528 aa6.43□□□□□ -1.38
CUS1YMR240C GIP2P40036 548 aa6.43□□□□□ -1.38
CUS1YMR240C KRI1P42846 591 aaKnown RBP6.43□□□□□ -1.38
CUS1YMR240C MTR4P47047 1073 aaKnown RBP6.43□□□□□ -1.38
CUS1YMR240C NAN1Q02931 896 aaKnown RBP6.43□□□□□ -1.38
CUS1YMR240C SPO71Q03868 1245 aa6.43□□□□□ -1.38
CUS1YMR240C REC8Q12188 680 aa6.43□□□□□ -1.38
CUS1YMR240C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
CUS1YMR240C LYP1P32487 611 aa6.42□□□□□ -1.38
CUS1YMR240C YKL091CP33324 310 aaKnown RBP6.42□□□□□ -1.38
CUS1YMR240C NMD2P38798 1089 aaKnown RBP6.42□□□□□ -1.38
CUS1YMR240C MEC3Q02574 474 aa6.42□□□□□ -1.38
CUS1YMR240C ROD1Q02805 837 aa6.42□□□□□ -1.38
CUS1YMR240C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
CUS1YMR240C GIS4Q04233 774 aa6.42□□□□□ -1.38
CUS1YMR240C TRP2P00899 507 aaKnown RBP6.41□□□□□ -1.38
CUS1YMR240C BAS1P22035 811 aa6.41□□□□□ -1.38
CUS1YMR240C RER2P35196 286 aa6.41□□□□□ -1.38
CUS1YMR240C NEM1P38757 446 aa6.41□□□□□ -1.38
CUS1YMR240C OSW7P43611 510 aa6.41□□□□□ -1.38
CUS1YMR240C GCV1P48015 400 aa6.41□□□□□ -1.38
CUS1YMR240C TYW3P53177 273 aa6.41□□□□□ -1.38
CUS1YMR240C RPN4Q03465 531 aa6.41□□□□□ -1.38
CUS1YMR240C UTP5Q04177 643 aaKnown RBP6.41□□□□□ -1.38
CUS1YMR240C BDF2Q07442 638 aa6.41□□□□□ -1.38
CUS1YMR240C NAR1P23503 491 aaKnown RBP6.4□□□□□ -1.39
CUS1YMR240C AGP1P25376 633 aa6.4□□□□□ -1.39
CUS1YMR240C YKL069WP36088 180 aa6.4□□□□□ -1.39
CUS1YMR240C PAN5P38787 379 aa6.4□□□□□ -1.39
CUS1YMR240C SLS1P42900 643 aa6.4□□□□□ -1.39
CUS1YMR240C JJJ3P47138 172 aa6.4□□□□□ -1.39
CUS1YMR240C DOS2P54858 310 aa6.4□□□□□ -1.39
CUS1YMR240C RKM2Q03942 479 aa6.4□□□□□ -1.39
CUS1YMR240C SPO20Q04359 397 aa6.4□□□□□ -1.39
CUS1YMR240C EST2Q06163 884 aa6.4□□□□□ -1.39
CUS1YMR240C CDC53Q12018 815 aaKnown RBP6.4□□□□□ -1.39
CUS1YMR240C RAD4P14736 754 aa6.39□□□□□ -1.39
CUS1YMR240C ADD66P36040 267 aa6.39□□□□□ -1.39
CUS1YMR240C POL5P39985 1022 aaKnown RBP6.39□□□□□ -1.39
CUS1YMR240C YDL176WQ12027 708 aa6.39□□□□□ -1.39
CUS1YMR240C YOR131CQ12486 218 aa6.39□□□□□ -1.39
CUS1YMR240C SBA1P28707 216 aaKnown RBP6.38□□□□□ -1.39
CUS1YMR240C MKK2P32491 506 aa6.38□□□□□ -1.39
CUS1YMR240C ALG14P38242 237 aa6.38□□□□□ -1.39
CUS1YMR240C BUD6P41697 788 aa6.38□□□□□ -1.39
CUS1YMR240C YLL054CQ12244 843 aa6.38□□□□□ -1.39
CUS1YMR240C CIT2P08679 460 aa6.37□□□□□ -1.39
CUS1YMR240C GAR1P28007 205 aaKnown RBP6.37□□□□□ -1.39
CUS1YMR240C TED1P40533 473 aa6.37□□□□□ -1.39
CUS1YMR240C HUL5P53119 910 aa6.37□□□□□ -1.39
CUS1YMR240C RNH70P53331 553 aa6.37□□□□□ -1.39
CUS1YMR240C SHE9Q04172 456 aa6.37□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms