RNA–Protein interactions for RNA: ENST00000642118.1

CASC19-281, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,554 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-281ENST00000642118 TIMP2P16035 220 aa9.46□□□□□ -0.89
CASC19-281ENST00000642118 C4orf48Q5BLP8 95 aa9.46□□□□□ -0.89
CASC19-281ENST00000642118 WDR4P57081 412 aaKnown RBP9.46□□□□□ -0.9
CASC19-281ENST00000642118 NR5A1Q13285 461 aa9.46□□□□□ -0.9
CASC19-281ENST00000642118 ARID5BQ14865 1188 aa9.46□□□□□ -0.9
CASC19-281ENST00000642118 TOPBP1Q92547 1522 aa9.46□□□□□ -0.9
CASC19-281ENST00000642118 PRDM2Q13029 1718 aa9.45□□□□□ -0.9
CASC19-281ENST00000642118 ZFP42Q96MM3 310 aa9.45□□□□□ -0.9
CASC19-281ENST00000642118 GRM5P41594 1212 aa9.44□□□□□ -0.9
CASC19-281ENST00000642118 SKIV2LQ15477 1246 aaKnown RBP9.44□□□□□ -0.9
CASC19-281ENST00000642118 NBPF14Q5TI25 921 aa9.44□□□□□ -0.9
CASC19-281ENST00000642118 SH3RF1Q7Z6J0 888 aa9.44□□□□□ -0.9
CASC19-281ENST00000642118 NXF1Q9UBU9 619 aaKnown RBP9.44□□□□□ -0.9
CASC19-281ENST00000642118 MRPL14Q6P1L8 145 aaKnown RBP9.43□□□□□ -0.9
CASC19-281ENST00000642118 SLC16A10Q8TF71 515 aa9.43□□□□□ -0.9
CASC19-281ENST00000642118 C1QTNF2Q9BXJ5 285 aa9.43□□□□□ -0.9
CASC19-281ENST00000642118 ABCC8Q09428 1581 aa9.43□□□□□ -0.9
CASC19-281ENST00000642118 CTDSPL2Q05D32 466 aa9.42□□□□□ -0.9
CASC19-281ENST00000642118 SCARF1Q14162 830 aa9.42□□□□□ -0.9
CASC19-281ENST00000642118 NPAS3Q8IXF0 933 aa9.42□□□□□ -0.9
CASC19-281ENST00000642118 GPKOWQ92917 476 aaPredicted RBP eCLIP9.42□□□□□ -0.9
CASC19-281ENST00000642118 LCE2CQ5TA81 110 aa9.41□□□□□ -0.9
CASC19-281ENST00000642118 SH3BP5LQ7L8J4 393 aa9.41□□□□□ -0.9
CASC19-281ENST00000642118 RIMBP3CA6NJZ7 1639 aa9.41□□□□□ -0.9
CASC19-281ENST00000642118 RIMBP3BA6NNM3 1639 aa9.41□□□□□ -0.9
CASC19-281ENST00000642118 RIMBP3Q9UFD9 1639 aa9.41□□□□□ -0.9
CASC19-281ENST00000642118 INSM1Q01101 510 aaPredicted RBP9.41□□□□□ -0.9
CASC19-281ENST00000642118 SH3D19Q5HYK7 790 aa9.41□□□□□ -0.9
CASC19-281ENST00000642118 DDRGK1Q96HY6 314 aa9.41□□□□□ -0.9
CASC19-281ENST00000642118 KDM4CQ9H3R0 1056 aa9.41□□□□□ -0.9
CASC19-281ENST00000642118 TRMT44Q8IYL2 757 aaKnown RBP9.4□□□□□ -0.9
CASC19-281ENST00000642118 MAP4K5Q9Y4K4 846 aa9.4□□□□□ -0.9
CASC19-281ENST00000642118 AQRO60306 1485 aaKnown RBP eCLIP9.4□□□□□ -0.91
CASC19-281ENST00000642118 DNMBPQ6XZF7 1577 aa9.4□□□□□ -0.91
CASC19-281ENST00000642118 ZIC2O95409 532 aaPredicted RBP9.39□□□□□ -0.91
CASC19-281ENST00000642118 NR3C2P08235 984 aa9.39□□□□□ -0.91
CASC19-281ENST00000642118 UBTFP17480 764 aaKnown RBP9.39□□□□□ -0.91
CASC19-281ENST00000642118 NEUROD2Q15784 382 aa9.39□□□□□ -0.91
CASC19-281ENST00000642118 CYB5RLQ6IPT4 315 aa9.39□□□□□ -0.91
CASC19-281ENST00000642118 ITPKCQ96DU7 683 aa9.39□□□□□ -0.91
CASC19-281ENST00000642118 EIF4G3O43432 1585 aaKnown RBP9.38□□□□□ -0.91
CASC19-281ENST00000642118 PPP2R2DQ66LE6 453 aa9.38□□□□□ -0.91
CASC19-281ENST00000642118 PURBQ96QR8 312 aaKnown RBP9.38□□□□□ -0.91
CASC19-281ENST00000642118 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.38□□□□□ -0.91
CASC19-281ENST00000642118 FAM117AQ9C073 453 aa9.38□□□□□ -0.91
CASC19-281ENST00000642118 GPBP1L1Q9HC44 474 aaPredicted RBP9.38□□□□□ -0.91
CASC19-281ENST00000642118 ARHGEF11O15085 1522 aa9.38□□□□□ -0.91
CASC19-281ENST00000642118 PDXDC2PQ6P474 469 aa9.37□□□□□ -0.91
CASC19-281ENST00000642118 PROCA1Q8NCQ7 364 aaPredicted RBP9.37□□□□□ -0.91
CASC19-281ENST00000642118 ZFAND3Q9H8U3 227 aa9.37□□□□□ -0.91
CASC19-281ENST00000642118 MAGEB6P1A0A0J9YX57 407 aa9.36□□□□□ -0.91
CASC19-281ENST00000642118 VASH1Q7L8A9 365 aaPredicted RBP9.36□□□□□ -0.91
CASC19-281ENST00000642118 STK17AQ9UEE5 414 aa9.36□□□□□ -0.91
CASC19-281ENST00000642118 FBXO31Q5XUX0 539 aaPredicted RBP9.35□□□□□ -0.91
CASC19-281ENST00000642118 LRRN4Q8WUT4 740 aa9.35□□□□□ -0.91
CASC19-281ENST00000642118 IRF7Q92985 503 aa9.35□□□□□ -0.91
CASC19-281ENST00000642118 POLA1P09884 1462 aaPredicted RBP9.35□□□□□ -0.91
CASC19-281ENST00000642118 SOGA1O94964 1423 aa9.34□□□□□ -0.91
CASC19-281ENST00000642118 TARBP1Q13395 1621 aaKnown RBP9.34□□□□□ -0.91
CASC19-281ENST00000642118 H3BM21 787 aa9.34□□□□□ -0.91
CASC19-281ENST00000642118 FKBPLQ9UIM3 349 aa9.34□□□□□ -0.91
CASC19-281ENST00000642118 RAD54L2Q9Y4B4 1467 aa9.34□□□□□ -0.91
CASC19-281ENST00000642118 TDRD9Q8NDG6 1382 aaKnown RBP9.34□□□□□ -0.91
CASC19-281ENST00000642118 TRIM26Q12899 539 aaPredicted RBP9.33□□□□□ -0.92
CASC19-281ENST00000642118 ERFEQ4G0M1 354 aa9.33□□□□□ -0.92
CASC19-281ENST00000642118 ATP1B4Q9UN42 357 aaPredicted RBP9.33□□□□□ -0.92
CASC19-281ENST00000642118 EMILIN1Q9Y6C2 1016 aa9.33□□□□□ -0.92
CASC19-281ENST00000642118 ZC3H4Q9UPT8 1303 aaKnown RBP9.33□□□□□ -0.92
CASC19-281ENST00000642118 UPP2O95045 317 aa9.33□□□□□ -0.92
CASC19-281ENST00000642118 FSHRP23945 695 aa9.33□□□□□ -0.92
CASC19-281ENST00000642118 CARD14Q9BXL6 1004 aa9.33□□□□□ -0.92
CASC19-281ENST00000642118 NR6A1Q15406 480 aa9.32□□□□□ -0.92
CASC19-281ENST00000642118 CCDC116Q8IYX3 515 aa9.32□□□□□ -0.92
CASC19-281ENST00000642118 MEIOBQ8N635 442 aa9.32□□□□□ -0.92
CASC19-281ENST00000642118 ARHGAP9Q9BRR9 750 aa9.32□□□□□ -0.92
CASC19-281ENST00000642118 CHD1O14646 1710 aa9.32□□□□□ -0.92
CASC19-281ENST00000642118 VEGFBP49765 207 aa9.31□□□□□ -0.92
CASC19-281ENST00000642118 C6orf118Q5T5N4 469 aa9.31□□□□□ -0.92
CASC19-281ENST00000642118 CHMP7Q8WUX9 453 aaPredicted RBP9.31□□□□□ -0.92
CASC19-281ENST00000642118 CDV3Q9UKY7 258 aaKnown RBP9.31□□□□□ -0.92
CASC19-281ENST00000642118 GMPRP36959 345 aa9.3□□□□□ -0.92
CASC19-281ENST00000642118 LINC00528Q8N1L1 170 aa9.3□□□□□ -0.92
CASC19-281ENST00000642118 SOBPA7XYQ1 873 aa9.29□□□□□ -0.92
CASC19-281ENST00000642118 AP1G2O75843 785 aa9.29□□□□□ -0.92
CASC19-281ENST00000642118 BMP2P12643 396 aa9.29□□□□□ -0.92
CASC19-281ENST00000642118 ZBTB33Q86T24 672 aa9.29□□□□□ -0.92
CASC19-281ENST00000642118 TSEN34Q9BSV6 310 aaKnown RBP9.29□□□□□ -0.92
CASC19-281ENST00000642118 GPSM3Q9Y4H4 160 aa9.29□□□□□ -0.92
CASC19-281ENST00000642118 FGD5Q6ZNL6 1462 aa9.29□□□□□ -0.92
CASC19-281ENST00000642118 SNAPC4Q5SXM2 1469 aa9.29□□□□□ -0.92
CASC19-281ENST00000642118 ARAP1Q96P48 1450 aa9.29□□□□□ -0.92
CASC19-281ENST00000642118 MAN1A2O60476 641 aa9.29□□□□□ -0.92
CASC19-281ENST00000642118 PTK2Q05397 1052 aa9.29□□□□□ -0.92
CASC19-281ENST00000642118 NPM2Q86SE8 214 aaKnown RBP9.29□□□□□ -0.92
CASC19-281ENST00000642118 PGPEP1Q9NXJ5 209 aa9.28□□□□□ -0.92
CASC19-281ENST00000642118 SOS2Q07890 1332 aaPredicted RBP9.27□□□□□ -0.93
CASC19-281ENST00000642118 ERBB4Q15303 1308 aa9.27□□□□□ -0.93
CASC19-281ENST00000642118 PPP1R26Q5T8A7 1209 aaPredicted RBP9.27□□□□□ -0.93
CASC19-281ENST00000642118 KCTD15Q96SI1 283 aaPredicted RBP9.27□□□□□ -0.93
CASC19-281ENST00000642118 PNMA1Q8ND90 353 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms