RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 CHRNA2Q15822 529 aa23.38■■□□□ 1.33
PHGDH-230ENST00000641927 PNISRQ8TF01 805 aaKnown RBP23.38■■□□□ 1.33
PHGDH-230ENST00000641927 IP6K1Q92551 441 aa23.38■■□□□ 1.33
PHGDH-230ENST00000641927 SHPRHQ149N8 1683 aa23.37■■□□□ 1.33
PHGDH-230ENST00000641927 CPDO75976 1380 aa23.37■■□□□ 1.33
PHGDH-230ENST00000641927 NUDCQ9Y266 331 aa23.36■■□□□ 1.33
PHGDH-230ENST00000641927 COL3A1P02461 1466 aaPredicted RBP23.36■■□□□ 1.33
PHGDH-230ENST00000641927 INSRP06213 1382 aa23.36■■□□□ 1.33
PHGDH-230ENST00000641927 U2SURPO15042 1029 aaKnown RBP23.35■■□□□ 1.33
PHGDH-230ENST00000641927 LTV1Q96GA3 475 aaPredicted RBP23.35■■□□□ 1.33
PHGDH-230ENST00000641927 ADAMTS2O95450 1211 aa23.35■■□□□ 1.33
PHGDH-230ENST00000641927 EIF4A2Q14240 407 aaKnown RBP23.33■■□□□ 1.33
PHGDH-230ENST00000641927 FBXO41Q8TF61 875 aa23.33■■□□□ 1.33
PHGDH-230ENST00000641927 AXIN2Q9Y2T1 843 aa23.32■■□□□ 1.32
PHGDH-230ENST00000641927 U2AF1L5P0DN76 240 aaPredicted RBP23.32■■□□□ 1.32
PHGDH-230ENST00000641927 IL13P35225 146 aa23.32■■□□□ 1.32
PHGDH-230ENST00000641927 U2AF1Q01081 240 aaKnown RBP eCLIP23.32■■□□□ 1.32
PHGDH-230ENST00000641927 FAM83GA6ND36 823 aa23.31■■□□□ 1.32
PHGDH-230ENST00000641927 SPATA31A6Q5VVP1 1343 aa23.31■■□□□ 1.32
PHGDH-230ENST00000641927 BLMP54132 1417 aaPredicted RBP23.31■■□□□ 1.32
PHGDH-230ENST00000641927 ADAMTS8Q9UP79 889 aa23.3■■□□□ 1.32
PHGDH-230ENST00000641927 ANKRD24Q8TF21 1146 aa23.28■■□□□ 1.32
PHGDH-230ENST00000641927 COL18A1P39060 1754 aa23.28■■□□□ 1.32
PHGDH-230ENST00000641927 RGPD5Q99666 1765 aa23.28■■□□□ 1.32
PHGDH-230ENST00000641927 ABCC6O95255 1503 aa23.27■■□□□ 1.32
PHGDH-230ENST00000641927 CSB-PGBD3P0DP91 1061 aa23.26■■□□□ 1.31
PHGDH-230ENST00000641927 YTHDC1Q96MU7 727 aaKnown RBP23.25■■□□□ 1.31
PHGDH-230ENST00000641927 BTG4Q9NY30 223 aa23.25■■□□□ 1.31
PHGDH-230ENST00000641927 COL14A1Q05707 1796 aaKnown RBP23.24■■□□□ 1.31
PHGDH-230ENST00000641927 ERBB3P21860 1342 aa23.24■■□□□ 1.31
PHGDH-230ENST00000641927 CAMTA1Q9Y6Y1 1673 aa23.24■■□□□ 1.31
PHGDH-230ENST00000641927 HMOX1P09601 288 aa23.24■■□□□ 1.31
PHGDH-230ENST00000641927 EVA1CP58658 441 aa23.24■■□□□ 1.31
PHGDH-230ENST00000641927 LMO7Q8WWI1 1683 aa23.23■■□□□ 1.31
PHGDH-230ENST00000641927 MEX3CQ5U5Q3 659 aaKnown RBP23.23■■□□□ 1.31
PHGDH-230ENST00000641927 EYA1Q99502 592 aa23.23■■□□□ 1.31
PHGDH-230ENST00000641927 STRN4Q9NRL3 753 aa23.23■■□□□ 1.31
PHGDH-230ENST00000641927 C8orf37Q96NL8 207 aa23.22■■□□□ 1.31
PHGDH-230ENST00000641927 SULT6B1Q6IMI4 303 aa23.22■■□□□ 1.31
PHGDH-230ENST00000641927 CCDC146Q8IYE0 955 aa23.22■■□□□ 1.31
PHGDH-230ENST00000641927 LRP6O75581 1613 aa23.21■■□□□ 1.31
PHGDH-230ENST00000641927 NLRP2Q9NX02 1062 aa23.21■■□□□ 1.31
PHGDH-230ENST00000641927 NBPF6Q5VWK0 638 aa23.2■■□□□ 1.3
PHGDH-230ENST00000641927 USHBP1Q8N6Y0 703 aa23.2■■□□□ 1.3
PHGDH-230ENST00000641927 NGLY1Q96IV0 654 aa23.2■■□□□ 1.3
PHGDH-230ENST00000641927 NBPF4Q96M43 638 aa23.2■■□□□ 1.3
PHGDH-230ENST00000641927 COL5A2P05997 1499 aaPredicted RBP23.2■■□□□ 1.3
PHGDH-230ENST00000641927 IGSF1Q8N6C5 1336 aa23.2■■□□□ 1.3
PHGDH-230ENST00000641927 AEBP1Q8IUX7 1158 aa23.19■■□□□ 1.3
PHGDH-230ENST00000641927 RGPD1P0DJD0 1748 aa23.19■■□□□ 1.3
PHGDH-230ENST00000641927 SENP3-EIF4A1A0A087X0R7 540 aa23.18■■□□□ 1.3
PHGDH-230ENST00000641927 FCHSD2O94868 740 aa23.18■■□□□ 1.3
PHGDH-230ENST00000641927 TOM1L2Q6ZVM7 507 aa23.18■■□□□ 1.3
PHGDH-230ENST00000641927 PNNQ9H307 717 aaKnown RBP23.18■■□□□ 1.3
PHGDH-230ENST00000641927 PLCH1Q4KWH8 1693 aa23.18■■□□□ 1.3
PHGDH-230ENST00000641927 WDR17Q8IZU2 1322 aa23.18■■□□□ 1.3
PHGDH-230ENST00000641927 RGPD2P0DJD1 1756 aa23.17■■□□□ 1.3
PHGDH-230ENST00000641927 RSPH6AQ9H0K4 717 aa23.17■■□□□ 1.3
PHGDH-230ENST00000641927 PRKAR2BP31323 418 aa23.16■■□□□ 1.3
PHGDH-230ENST00000641927 NEFMP07197 916 aa23.16■■□□□ 1.3
PHGDH-230ENST00000641927 LARP1Q6PKG0 1096 aaKnown RBP23.16■■□□□ 1.3
PHGDH-230ENST00000641927 HNRNPUQ00839 825 aaKnown RBP eCLIP23.15■■□□□ 1.3
PHGDH-230ENST00000641927 RUNDC1Q96C34 613 aa23.15■■□□□ 1.3
PHGDH-230ENST00000641927 MAPK8IP3Q9UPT6 1336 aa23.15■■□□□ 1.3
PHGDH-230ENST00000641927 FAM208AQ9UK61 1670 aaKnown RBP23.14■■□□□ 1.3
PHGDH-230ENST00000641927 SLIT2O94813 1529 aa23.12■■□□□ 1.29
PHGDH-230ENST00000641927 PLEKHF1Q96S99 279 aa23.12■■□□□ 1.29
PHGDH-230ENST00000641927 USP35Q9P2H5 1018 aa23.12■■□□□ 1.29
PHGDH-230ENST00000641927 KDRP35968 1356 aa23.12■■□□□ 1.29
PHGDH-230ENST00000641927 NWD2Q9ULI1 1742 aa23.11■■□□□ 1.29
PHGDH-230ENST00000641927 APAF1O14727 1248 aa23.1■■□□□ 1.29
PHGDH-230ENST00000641927 SALL2Q9Y467 1007 aaPredicted RBP23.1■■□□□ 1.29
PHGDH-230ENST00000641927 CRB1P82279 1406 aa23.1■■□□□ 1.29
PHGDH-230ENST00000641927 CARD10Q9BWT7 1032 aa23.09■■□□□ 1.29
PHGDH-230ENST00000641927 CCDC9Q9Y3X0 531 aaKnown RBP23.09■■□□□ 1.29
PHGDH-230ENST00000641927 UNC5CLQ8IV45 518 aa23.09■■□□□ 1.29
PHGDH-230ENST00000641927 FNBP4Q8N3X1 1017 aaPredicted RBP23.09■■□□□ 1.29
PHGDH-230ENST00000641927 PHACTR3Q96KR7 559 aa23.09■■□□□ 1.29
PHGDH-230ENST00000641927 USP21Q9UK80 565 aa23.09■■□□□ 1.29
PHGDH-230ENST00000641927 NRAPQ86VF7 1730 aa23.08■■□□□ 1.29
PHGDH-230ENST00000641927 TCP11L2Q8N4U5 519 aa23.08■■□□□ 1.29
PHGDH-230ENST00000641927 RAPGEF4Q8WZA2 1011 aa23.08■■□□□ 1.29
PHGDH-230ENST00000641927 NEUROD2Q15784 382 aa23.07■■□□□ 1.28
PHGDH-230ENST00000641927 RRP7AQ9Y3A4 280 aaKnown RBP23.07■■□□□ 1.28
PHGDH-230ENST00000641927 NCAPD2Q15021 1401 aa23.07■■□□□ 1.28
PHGDH-230ENST00000641927 AFF2P51816 1311 aa23.07■■□□□ 1.28
PHGDH-230ENST00000641927 BCL9LQ86UU0 1499 aa23.06■■□□□ 1.28
PHGDH-230ENST00000641927 TATP17735 454 aaPredicted RBP23.04■■□□□ 1.28
PHGDH-230ENST00000641927 TMPOP42166 694 aaKnown RBP23.02■■□□□ 1.28
PHGDH-230ENST00000641927 SPATA31A1Q5TZJ5 1347 aa23.01■■□□□ 1.27
PHGDH-230ENST00000641927 IL2RBP14784 551 aa23.01■■□□□ 1.27
PHGDH-230ENST00000641927 VPS72Q15906 364 aa23.01■■□□□ 1.27
PHGDH-230ENST00000641927 NFE2L2Q16236 605 aa23.01■■□□□ 1.27
PHGDH-230ENST00000641927 SPATA31A5Q5VU36 1347 aa23.01■■□□□ 1.27
PHGDH-230ENST00000641927 SPATA31A7Q8IWB4 1347 aa23.01■■□□□ 1.27
PHGDH-230ENST00000641927 MEGF6O75095 1541 aa23.01■■□□□ 1.27
PHGDH-230ENST00000641927 MTHFSDQ2M296 383 aaKnown RBP23■■□□□ 1.27
PHGDH-230ENST00000641927 PLEKHO1Q53GL0 409 aaPredicted RBP23■■□□□ 1.27
PHGDH-230ENST00000641927 RIPK4P57078 832 aa23■■□□□ 1.27
PHGDH-230ENST00000641927 GAS2L2Q8NHY3 880 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms