RNA–Protein interactions for RNA: ENST00000641923.1

SAMMSON-223, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, human

Gene SAMMSON, Length 1,213 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMMSON-223	ENST00000641923	CDK12	Q9NYV4	1490 aa	Predicted RBP	12.08	□□□□□ -0.48
SAMMSON-223	ENST00000641923	FLT4	P35916	1363 aa		12.07	□□□□□ -0.48
SAMMSON-223	ENST00000641923	CCER2	I3L3R5	266 aa		12.07	□□□□□ -0.48
SAMMSON-223	ENST00000641923	BLM	P54132	1417 aa	Predicted RBP	12.07	□□□□□ -0.48
SAMMSON-223	ENST00000641923	NUTM2G	Q5VZR2	741 aa		12.07	□□□□□ -0.48
SAMMSON-223	ENST00000641923	INSR	P06213	1382 aa		12.06	□□□□□ -0.48
SAMMSON-223	ENST00000641923	COL14A1	Q05707	1796 aa	Known RBP	12.06	□□□□□ -0.48
SAMMSON-223	ENST00000641923	PPP2R1A	P30153	589 aa		12.06	□□□□□ -0.48
SAMMSON-223	ENST00000641923	ARHGEF25	Q86VW2	580 aa		12.06	□□□□□ -0.48
SAMMSON-223	ENST00000641923	AMPH	P49418	695 aa		12.05	□□□□□ -0.48
SAMMSON-223	ENST00000641923	PRDM11	Q9NQV5	511 aa		12.05	□□□□□ -0.48
SAMMSON-223	ENST00000641923	ZRANB1	Q9UGI0	708 aa		12.05	□□□□□ -0.48
SAMMSON-223	ENST00000641923	FAM208A	Q9UK61	1670 aa	Known RBP	12.05	□□□□□ -0.48
SAMMSON-223	ENST00000641923	IP6K1	Q92551	441 aa		12.04	□□□□□ -0.48
SAMMSON-223	ENST00000641923	POLK	Q9UBT6	870 aa		12.04	□□□□□ -0.48
SAMMSON-223	ENST00000641923	MAP3K19	Q56UN5	1328 aa		12.04	□□□□□ -0.48
SAMMSON-223	ENST00000641923	NWD2	Q9ULI1	1742 aa		12.03	□□□□□ -0.48
SAMMSON-223	ENST00000641923	TNNT2	P45379	298 aa	Predicted RBP	12.03	□□□□□ -0.48
SAMMSON-223	ENST00000641923	NUDC	Q9Y266	331 aa		12.03	□□□□□ -0.48
SAMMSON-223	ENST00000641923	KIAA0232	Q92628	1395 aa		12.03	□□□□□ -0.48
SAMMSON-223	ENST00000641923	MTHFS	P49914	203 aa		12.02	□□□□□ -0.49
SAMMSON-223	ENST00000641923	ZC3H6	P61129	1189 aa	Known RBP	12.02	□□□□□ -0.49
SAMMSON-223	ENST00000641923	CABLES1	Q8TDN4	633 aa		12.02	□□□□□ -0.49
SAMMSON-223	ENST00000641923	LMO7	Q8WWI1	1683 aa		12.01	□□□□□ -0.49
SAMMSON-223	ENST00000641923	COL18A1	P39060	1754 aa		12.01	□□□□□ -0.49
SAMMSON-223	ENST00000641923	SOX12	O15370	315 aa		12.01	□□□□□ -0.49
SAMMSON-223	ENST00000641923	HOXC9	P31274	260 aa		12.01	□□□□□ -0.49
SAMMSON-223	ENST00000641923	CNGB1	Q14028	1251 aa	Predicted RBP	12.01	□□□□□ -0.49
SAMMSON-223	ENST00000641923	RRS1	Q15050	365 aa	Known RBP	12.01	□□□□□ -0.49
SAMMSON-223	ENST00000641923	PNN	Q9H307	717 aa	Known RBP	12.01	□□□□□ -0.49
SAMMSON-223	ENST00000641923	MEX3C	Q5U5Q3	659 aa	Known RBP	12	□□□□□ -0.49
SAMMSON-223	ENST00000641923	EMILIN1	Q9Y6C2	1016 aa		12	□□□□□ -0.49
SAMMSON-223	ENST00000641923	PLEKHG2	Q9H7P9	1386 aa		12	□□□□□ -0.49
SAMMSON-223	ENST00000641923	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	12	□□□□□ -0.49
SAMMSON-223	ENST00000641923	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.99	□□□□□ -0.49
SAMMSON-223	ENST00000641923	NUTM2E	B1AL46	878 aa	Predicted RBP	11.99	□□□□□ -0.49
SAMMSON-223	ENST00000641923	PPM1G	O15355	546 aa	Predicted RBP	11.99	□□□□□ -0.49
SAMMSON-223	ENST00000641923	DIAPH1	O60610	1272 aa	Known RBP	11.99	□□□□□ -0.49
SAMMSON-223	ENST00000641923	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.99	□□□□□ -0.49
SAMMSON-223	ENST00000641923	PLCH1	Q4KWH8	1693 aa		11.99	□□□□□ -0.49
SAMMSON-223	ENST00000641923	PEAK1	Q9H792	1746 aa		11.99	□□□□□ -0.49
SAMMSON-223	ENST00000641923	MRS2	Q9HD23	443 aa		11.98	□□□□□ -0.49
SAMMSON-223	ENST00000641923	SLIT2	O94813	1529 aa		11.97	□□□□□ -0.49
SAMMSON-223	ENST00000641923	COL3A1	P02461	1466 aa	Predicted RBP	11.97	□□□□□ -0.49
SAMMSON-223	ENST00000641923	COL5A2	P05997	1499 aa	Predicted RBP	11.97	□□□□□ -0.49
SAMMSON-223	ENST00000641923	ERBB3	P21860	1342 aa		11.97	□□□□□ -0.49
SAMMSON-223	ENST00000641923	ZBTB7C	A1YPR0	619 aa		11.97	□□□□□ -0.49
SAMMSON-223	ENST00000641923	ADAMTS2	O95450	1211 aa		11.97	□□□□□ -0.49
SAMMSON-223	ENST00000641923	WDR43	Q15061	677 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
SAMMSON-223	ENST00000641923	RGPD5	Q99666	1765 aa		11.97	□□□□□ -0.49
SAMMSON-223	ENST00000641923	WDR17	Q8IZU2	1322 aa		11.96	□□□□□ -0.49
SAMMSON-223	ENST00000641923	FAM83G	A6ND36	823 aa		11.96	□□□□□ -0.49
SAMMSON-223	ENST00000641923	PLEKHG5	O94827	1062 aa		11.96	□□□□□ -0.49
SAMMSON-223	ENST00000641923	NEFM	P07197	916 aa		11.96	□□□□□ -0.49
SAMMSON-223	ENST00000641923	EVA1C	P58658	441 aa		11.96	□□□□□ -0.49
SAMMSON-223	ENST00000641923	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.96	□□□□□ -0.49
SAMMSON-223	ENST00000641923	NGLY1	Q96IV0	654 aa		11.96	□□□□□ -0.49
SAMMSON-223	ENST00000641923	LRP6	O75581	1613 aa		11.96	□□□□□ -0.5
SAMMSON-223	ENST00000641923	NRAP	Q86VF7	1730 aa		11.95	□□□□□ -0.5
SAMMSON-223	ENST00000641923	CAMTA1	Q9Y6Y1	1673 aa		11.95	□□□□□ -0.5
SAMMSON-223	ENST00000641923	CSB-PGBD3	P0DP91	1061 aa		11.95	□□□□□ -0.5
SAMMSON-223	ENST00000641923	HSP90AB2P	Q58FF8	381 aa		11.95	□□□□□ -0.5
SAMMSON-223	ENST00000641923	MIER1	Q8N108	512 aa		11.95	□□□□□ -0.5
SAMMSON-223	ENST00000641923	ANKRD24	Q8TF21	1146 aa		11.95	□□□□□ -0.5
SAMMSON-223	ENST00000641923	BTG4	Q9NY30	223 aa		11.95	□□□□□ -0.5
SAMMSON-223	ENST00000641923	CRB1	P82279	1406 aa		11.94	□□□□□ -0.5
SAMMSON-223	ENST00000641923	FBLN1	P23142	703 aa		11.94	□□□□□ -0.5
SAMMSON-223	ENST00000641923	IL13	P35225	146 aa		11.94	□□□□□ -0.5
SAMMSON-223	ENST00000641923	EIF4A2	Q14240	407 aa	Known RBP	11.94	□□□□□ -0.5
SAMMSON-223	ENST00000641923	CHRNA2	Q15822	529 aa		11.94	□□□□□ -0.5
SAMMSON-223	ENST00000641923	ZNF772	Q68DY9	489 aa	Predicted RBP	11.94	□□□□□ -0.5
SAMMSON-223	ENST00000641923	UNC5CL	Q8IV45	518 aa		11.94	□□□□□ -0.5
SAMMSON-223	ENST00000641923	C8orf37	Q96NL8	207 aa		11.94	□□□□□ -0.5
SAMMSON-223	ENST00000641923	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.94	□□□□□ -0.5
SAMMSON-223	ENST00000641923	RGPD1	P0DJD0	1748 aa		11.94	□□□□□ -0.5
SAMMSON-223	ENST00000641923	IGSF1	Q8N6C5	1336 aa		11.93	□□□□□ -0.5
SAMMSON-223	ENST00000641923	FCHSD2	O94868	740 aa		11.93	□□□□□ -0.5
SAMMSON-223	ENST00000641923	CARD10	Q9BWT7	1032 aa		11.93	□□□□□ -0.5
SAMMSON-223	ENST00000641923	THRAP3	Q9Y2W1	955 aa	Known RBP	11.93	□□□□□ -0.5
SAMMSON-223	ENST00000641923	NCAPD2	Q15021	1401 aa		11.93	□□□□□ -0.5
SAMMSON-223	ENST00000641923	KDR	P35968	1356 aa		11.92	□□□□□ -0.5
SAMMSON-223	ENST00000641923	U2SURP	O15042	1029 aa	Known RBP	11.92	□□□□□ -0.5
SAMMSON-223	ENST00000641923	TOM1L2	Q6ZVM7	507 aa		11.92	□□□□□ -0.5
SAMMSON-223	ENST00000641923	USP21	Q9UK80	565 aa		11.92	□□□□□ -0.5
SAMMSON-223	ENST00000641923	AXIN2	Q9Y2T1	843 aa		11.92	□□□□□ -0.5
SAMMSON-223	ENST00000641923	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.91	□□□□□ -0.5
SAMMSON-223	ENST00000641923	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
SAMMSON-223	ENST00000641923	VPS72	Q15906	364 aa		11.91	□□□□□ -0.5
SAMMSON-223	ENST00000641923	NGEF	Q8N5V2	710 aa		11.91	□□□□□ -0.5
SAMMSON-223	ENST00000641923	PNISR	Q8TF01	805 aa	Known RBP	11.91	□□□□□ -0.5
SAMMSON-223	ENST00000641923	NLRP2	Q9NX02	1062 aa		11.91	□□□□□ -0.5
SAMMSON-223	ENST00000641923	TRPC5	Q9UL62	973 aa	Predicted RBP	11.91	□□□□□ -0.5
SAMMSON-223	ENST00000641923	AFF2	P51816	1311 aa		11.9	□□□□□ -0.5
SAMMSON-223	ENST00000641923	POLA2	Q14181	598 aa		11.9	□□□□□ -0.5
SAMMSON-223	ENST00000641923	LTV1	Q96GA3	475 aa	Predicted RBP	11.9	□□□□□ -0.5
SAMMSON-223	ENST00000641923	EYA1	Q99502	592 aa		11.9	□□□□□ -0.5
SAMMSON-223	ENST00000641923	STRN4	Q9NRL3	753 aa		11.9	□□□□□ -0.5
SAMMSON-223	ENST00000641923	PARP4	Q9UKK3	1724 aa	Known RBP	11.9	□□□□□ -0.5
SAMMSON-223	ENST00000641923	BCL9L	Q86UU0	1499 aa		11.89	□□□□□ -0.51
SAMMSON-223	ENST00000641923	ILDR1	Q86SU0	546 aa	Predicted RBP	11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms