RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 ACEP12821 1306 aa10.85□□□□□ -0.67
PHGDH-225ENST00000641720 PLEKHG3A1L390 1219 aa10.85□□□□□ -0.67
PHGDH-225ENST00000641720 NUTM2GQ5VZR2 741 aa10.85□□□□□ -0.67
PHGDH-225ENST00000641720 NGDNQ8NEJ9 315 aaKnown RBP10.85□□□□□ -0.67
PHGDH-225ENST00000641720 USP35Q9P2H5 1018 aa10.85□□□□□ -0.67
PHGDH-225ENST00000641720 THRAP3Q9Y2W1 955 aaKnown RBP10.85□□□□□ -0.67
PHGDH-225ENST00000641720 ABCC6O95255 1503 aa10.84□□□□□ -0.67
PHGDH-225ENST00000641720 NBPF8Q3BBV2 869 aa10.84□□□□□ -0.67
PHGDH-225ENST00000641720 NBPF14Q5TI25 921 aa10.84□□□□□ -0.67
PHGDH-225ENST00000641720 MAP3K5Q99683 1374 aa10.84□□□□□ -0.67
PHGDH-225ENST00000641720 PAK3O75914 559 aaPredicted RBP10.83□□□□□ -0.68
PHGDH-225ENST00000641720 PDE3BQ13370 1112 aa10.83□□□□□ -0.68
PHGDH-225ENST00000641720 MARCH10Q8NA82 808 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-225ENST00000641720 RGPD2P0DJD1 1756 aa10.82□□□□□ -0.68
PHGDH-225ENST00000641720 USP6P35125 1406 aa10.82□□□□□ -0.68
PHGDH-225ENST00000641720 TAF1LQ8IZX4 1826 aa10.81□□□□□ -0.68
PHGDH-225ENST00000641720 CPSF1Q10570 1443 aaKnown RBP10.81□□□□□ -0.68
PHGDH-225ENST00000641720 BRD4O60885 1362 aaPredicted RBP10.8□□□□□ -0.68
PHGDH-225ENST00000641720 GCP02774 474 aa10.8□□□□□ -0.68
PHGDH-225ENST00000641720 SYT17Q9BSW7 474 aa10.8□□□□□ -0.68
PHGDH-225ENST00000641720 CDK19Q9BWU1 502 aa10.8□□□□□ -0.68
PHGDH-225ENST00000641720 BCL11BQ9C0K0 894 aaPredicted RBP10.8□□□□□ -0.68
PHGDH-225ENST00000641720 PPP1R1BQ9UD71 204 aaPredicted RBP10.8□□□□□ -0.68
PHGDH-225ENST00000641720 TNS2Q63HR2 1409 aa10.8□□□□□ -0.68
PHGDH-225ENST00000641720 PPIP5K1Q6PFW1 1433 aa10.8□□□□□ -0.68
PHGDH-225ENST00000641720 DOT1LQ8TEK3 1739 aa10.8□□□□□ -0.68
PHGDH-225ENST00000641720 C11orf95C9JLR9 678 aaPredicted RBP10.79□□□□□ -0.68
PHGDH-225ENST00000641720 ZBTB7AO95365 584 aa10.79□□□□□ -0.68
PHGDH-225ENST00000641720 FHDC1Q9C0D6 1143 aaPredicted RBP10.79□□□□□ -0.68
PHGDH-225ENST00000641720 AXIN2Q9Y2T1 843 aa10.79□□□□□ -0.68
PHGDH-225ENST00000641720 CCDC61Q9Y6R9 512 aa10.79□□□□□ -0.68
PHGDH-225ENST00000641720 FAM208AQ9UK61 1670 aaKnown RBP10.79□□□□□ -0.68
PHGDH-225ENST00000641720 C1QTNF8P60827 252 aa10.78□□□□□ -0.68
PHGDH-225ENST00000641720 WDR17Q8IZU2 1322 aa10.78□□□□□ -0.68
PHGDH-225ENST00000641720 SLC15A2Q16348 729 aa10.77□□□□□ -0.69
PHGDH-225ENST00000641720 TXNRD1Q16881 649 aa10.77□□□□□ -0.69
PHGDH-225ENST00000641720 ABTB2Q8N961 1025 aa10.77□□□□□ -0.69
PHGDH-225ENST00000641720 TOGARAM1Q9Y4F4 1720 aa10.77□□□□□ -0.69
PHGDH-225ENST00000641720 EVA1CP58658 441 aa10.76□□□□□ -0.69
PHGDH-225ENST00000641720 IFFO2Q5TF58 517 aa10.76□□□□□ -0.69
PHGDH-225ENST00000641720 DCAF11Q8TEB1 546 aa10.76□□□□□ -0.69
PHGDH-225ENST00000641720 ATF5Q9Y2D1 282 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-225ENST00000641720 DDB1Q16531 1140 aa10.75□□□□□ -0.69
PHGDH-225ENST00000641720 STAC3Q96MF2 364 aa10.75□□□□□ -0.69
PHGDH-225ENST00000641720 SENP3-EIF4A1A0A087X0R7 540 aa10.74□□□□□ -0.69
PHGDH-225ENST00000641720 ZNF827Q17R98 1081 aa10.74□□□□□ -0.69
PHGDH-225ENST00000641720 NLRP13Q86W25 1043 aa10.74□□□□□ -0.69
PHGDH-225ENST00000641720 MTFR1LQ9H019 292 aa10.74□□□□□ -0.69
PHGDH-225ENST00000641720 KIAA1551Q9HCM1 1747 aa10.74□□□□□ -0.69
PHGDH-225ENST00000641720 PCNTO95613 3336 aa10.73□□□□□ -0.69
PHGDH-225ENST00000641720 C5P01031 1676 aa10.73□□□□□ -0.69
PHGDH-225ENST00000641720 ARHGEF25Q86VW2 580 aa10.73□□□□□ -0.69
PHGDH-225ENST00000641720 KDM2AQ9Y2K7 1162 aa10.73□□□□□ -0.69
PHGDH-225ENST00000641720 UBR3Q6ZT12 1888 aa10.72□□□□□ -0.69
PHGDH-225ENST00000641720 NBPF1Q3BBV0 1214 aa10.72□□□□□ -0.69
PHGDH-225ENST00000641720 CD163L1Q9NR16 1453 aa10.72□□□□□ -0.69
PHGDH-225ENST00000641720 ITGB4P16144 1822 aa10.72□□□□□ -0.69
PHGDH-225ENST00000641720 CARD10Q9BWT7 1032 aa10.71□□□□□ -0.69
PHGDH-225ENST00000641720 LRRC4BQ9NT99 713 aa10.71□□□□□ -0.69
PHGDH-225ENST00000641720 BRCA1P38398 1863 aaKnown RBP10.7□□□□□ -0.7
PHGDH-225ENST00000641720 MAP2P11137 1827 aaKnown RBP10.7□□□□□ -0.7
PHGDH-225ENST00000641720 KIF13BQ9NQT8 1826 aa10.7□□□□□ -0.7
PHGDH-225ENST00000641720 SIN3AQ96ST3 1273 aa10.7□□□□□ -0.7
PHGDH-225ENST00000641720 CDCA7Q9BWT1 371 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-225ENST00000641720 CABP2Q9NPB3 220 aa10.7□□□□□ -0.7
PHGDH-225ENST00000641720 ADCY9O60503 1353 aa10.69□□□□□ -0.7
PHGDH-225ENST00000641720 NSD2O96028 1365 aa10.69□□□□□ -0.7
PHGDH-225ENST00000641720 CCDC7Q96M83 1385 aa10.69□□□□□ -0.7
PHGDH-225ENST00000641720 DCAF8L1A6NGE4 600 aa10.69□□□□□ -0.7
PHGDH-225ENST00000641720 TOM1L2Q6ZVM7 507 aa10.69□□□□□ -0.7
PHGDH-225ENST00000641720 AKT1S1Q96B36 256 aa10.69□□□□□ -0.7
PHGDH-225ENST00000641720 ARXQ96QS3 562 aa10.69□□□□□ -0.7
PHGDH-225ENST00000641720 STK32BQ9NY57 414 aa10.69□□□□□ -0.7
PHGDH-225ENST00000641720 CICQ96RK0 1608 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-225ENST00000641720 NLRP6P59044 892 aa10.68□□□□□ -0.7
PHGDH-225ENST00000641720 PNPLA7Q6ZV29 1317 aa10.67□□□□□ -0.7
PHGDH-225ENST00000641720 TTC21BQ7Z4L5 1316 aa10.67□□□□□ -0.7
PHGDH-225ENST00000641720 CENPJQ9HC77 1338 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-225ENST00000641720 CABP1Q9NZU7 370 aa10.67□□□□□ -0.7
PHGDH-225ENST00000641720 USP31Q70CQ4 1352 aa10.66□□□□□ -0.7
PHGDH-225ENST00000641720 ERBB3P21860 1342 aa10.66□□□□□ -0.7
PHGDH-225ENST00000641720 NLGN2Q8NFZ4 835 aa10.66□□□□□ -0.7
PHGDH-225ENST00000641720 YBX3P16989 372 aaKnown RBP eCLIP10.65□□□□□ -0.72e-7■□□□□ 10.4
PHGDH-225ENST00000641720 NEUROD1Q13562 356 aa10.65□□□□□ -0.7
PHGDH-225ENST00000641720 SRPK2P78362 688 aaKnown RBP10.64□□□□□ -0.71
PHGDH-225ENST00000641720 CCER1Q8TC90 406 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-225ENST00000641720 PKD1L3Q7Z443 1732 aa10.64□□□□□ -0.71
PHGDH-225ENST00000641720 SBNO2Q9Y2G9 1366 aa10.64□□□□□ -0.71
PHGDH-225ENST00000641720 TTC21AQ8NDW8 1320 aa10.63□□□□□ -0.71
PHGDH-225ENST00000641720 GIGYF1O75420 1035 aaPredicted RBP10.63□□□□□ -0.71
PHGDH-225ENST00000641720 ACSBG1Q96GR2 724 aa10.63□□□□□ -0.71
PHGDH-225ENST00000641720 ATP10DQ9P241 1426 aa10.63□□□□□ -0.71
PHGDH-225ENST00000641720 WDR90Q96KV7 1748 aa10.63□□□□□ -0.71
PHGDH-225ENST00000641720 CLSPNQ9HAW4 1339 aa10.62□□□□□ -0.71
PHGDH-225ENST00000641720 C4BP0C0L5 1744 aa10.62□□□□□ -0.71
PHGDH-225ENST00000641720 ZBTB7CA1YPR0 619 aa10.62□□□□□ -0.71
PHGDH-225ENST00000641720 EXOC5O00471 708 aa10.62□□□□□ -0.71
PHGDH-225ENST00000641720 SLC16A10Q8TF71 515 aa10.62□□□□□ -0.71
PHGDH-225ENST00000641720 N4BP2Q86UW6 1770 aaPredicted RBP10.62□□□□□ -0.71
PHGDH-225ENST00000641720 ARFGEF1Q9Y6D6 1849 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms