RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 PDGFDQ9GZP0 370 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-222ENST00000641587 SPON1Q9HCB6 807 aa14.45□□□□□ -0.1
PHGDH-222ENST00000641587 PPP1R1BQ9UD71 204 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-222ENST00000641587 AKAP12Q02952 1782 aa14.45□□□□□ -0.1
PHGDH-222ENST00000641587 DDB1Q16531 1140 aa14.44□□□□□ -0.1
PHGDH-222ENST00000641587 UTRNP46939 3433 aa14.44□□□□□ -0.1
PHGDH-222ENST00000641587 CPSF1Q10570 1443 aaKnown RBP14.43□□□□□ -0.1
PHGDH-222ENST00000641587 SOX12O15370 315 aa14.43□□□□□ -0.1
PHGDH-222ENST00000641587 MARCH10Q8NA82 808 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-222ENST00000641587 BRD4O60885 1362 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-222ENST00000641587 MYOM1P52179 1685 aa14.42□□□□□ -0.1
PHGDH-222ENST00000641587 WDR17Q8IZU2 1322 aa14.41□□□□□ -0.1
PHGDH-222ENST00000641587 PLSCR1O15162 318 aa14.41□□□□□ -0.1
PHGDH-222ENST00000641587 PROM2Q8N271 834 aa14.41□□□□□ -0.1
PHGDH-222ENST00000641587 NINLQ9Y2I6 1382 aa14.41□□□□□ -0.1
PHGDH-222ENST00000641587 TRPM1Q7Z4N2 1603 aa14.41□□□□□ -0.1
PHGDH-222ENST00000641587 ZBTB7AO95365 584 aa14.4□□□□□ -0.1
PHGDH-222ENST00000641587 BCL11BQ9C0K0 894 aaPredicted RBP14.4□□□□□ -0.1
PHGDH-222ENST00000641587 TTC21BQ7Z4L5 1316 aa14.4□□□□□ -0.1
PHGDH-222ENST00000641587 C11orf95C9JLR9 678 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-222ENST00000641587 ARHGEF25Q86VW2 580 aa14.39□□□□□ -0.11
PHGDH-222ENST00000641587 NFAT5O94916 1531 aa14.39□□□□□ -0.11
PHGDH-222ENST00000641587 L3MBTL2Q969R5 705 aa14.38□□□□□ -0.11
PHGDH-222ENST00000641587 EVC2Q86UK5 1308 aa14.38□□□□□ -0.11
PHGDH-222ENST00000641587 CSB-PGBD3P0DP91 1061 aa14.37□□□□□ -0.11
PHGDH-222ENST00000641587 BCL9O00512 1426 aa14.36□□□□□ -0.11
PHGDH-222ENST00000641587 PTGER2P43116 358 aa14.36□□□□□ -0.11
PHGDH-222ENST00000641587 TXNRD1Q16881 649 aa14.36□□□□□ -0.11
PHGDH-222ENST00000641587 CARD10Q9BWT7 1032 aa14.36□□□□□ -0.11
PHGDH-222ENST00000641587 ATF5Q9Y2D1 282 aaPredicted RBP14.36□□□□□ -0.11
PHGDH-222ENST00000641587 TNS2Q63HR2 1409 aa14.35□□□□□ -0.11
PHGDH-222ENST00000641587 NHSQ6T4R5 1651 aa14.35□□□□□ -0.11
PHGDH-222ENST00000641587 MON2Q7Z3U7 1717 aa14.35□□□□□ -0.11
PHGDH-222ENST00000641587 KCNH5Q8NCM2 988 aa14.34□□□□□ -0.11
PHGDH-222ENST00000641587 SIN3AQ96ST3 1273 aa14.34□□□□□ -0.11
PHGDH-222ENST00000641587 CDCA7Q9BWT1 371 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-222ENST00000641587 ROCK2O75116 1388 aaKnown RBP14.34□□□□□ -0.11
PHGDH-222ENST00000641587 ACSBG1Q96GR2 724 aa14.33□□□□□ -0.12
PHGDH-222ENST00000641587 TTC21AQ8NDW8 1320 aa14.33□□□□□ -0.12
PHGDH-222ENST00000641587 KTN1Q86UP2 1357 aaKnown RBP14.33□□□□□ -0.12
PHGDH-222ENST00000641587 LTN1O94822 1766 aa14.32□□□□□ -0.12
PHGDH-222ENST00000641587 DCAF8L1A6NGE4 600 aa14.32□□□□□ -0.12
PHGDH-222ENST00000641587 EXOC5O00471 708 aa14.32□□□□□ -0.12
PHGDH-222ENST00000641587 SLC15A2Q16348 729 aa14.32□□□□□ -0.12
PHGDH-222ENST00000641587 ZNF692Q9BU19 519 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-222ENST00000641587 STK32BQ9NY57 414 aa14.32□□□□□ -0.12
PHGDH-222ENST00000641587 PAPPAQ13219 1627 aa14.32□□□□□ -0.12
PHGDH-222ENST00000641587 CCDC7Q96M83 1385 aa14.32□□□□□ -0.12
PHGDH-222ENST00000641587 ABCC6O95255 1503 aa14.31□□□□□ -0.12
PHGDH-222ENST00000641587 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.31□□□□□ -0.12
PHGDH-222ENST00000641587 FHDC1Q9C0D6 1143 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-222ENST00000641587 BTAF1O14981 1849 aa14.31□□□□□ -0.12
PHGDH-222ENST00000641587 USP54Q70EL1 1684 aa14.3□□□□□ -0.12
PHGDH-222ENST00000641587 NME9Q86XW9 330 aa14.3□□□□□ -0.12
PHGDH-222ENST00000641587 CCER1Q8TC90 406 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-222ENST00000641587 ERBB3P21860 1342 aa14.3□□□□□ -0.12
PHGDH-222ENST00000641587 CD163L1Q9NR16 1453 aa14.3□□□□□ -0.12
PHGDH-222ENST00000641587 NEUROD1Q13562 356 aa14.29□□□□□ -0.12
PHGDH-222ENST00000641587 SGIP1Q9BQI5 828 aa14.29□□□□□ -0.12
PHGDH-222ENST00000641587 KAT6BQ8WYB5 2073 aa14.29□□□□□ -0.12
PHGDH-222ENST00000641587 SYT17Q9BSW7 474 aa14.28□□□□□ -0.12
PHGDH-222ENST00000641587 NLRP2Q9NX02 1062 aa14.28□□□□□ -0.12
PHGDH-222ENST00000641587 GOLGB1Q14789 3259 aaKnown RBP14.28□□□□□ -0.12
PHGDH-222ENST00000641587 USP31Q70CQ4 1352 aa14.27□□□□□ -0.12
PHGDH-222ENST00000641587 SBNO2Q9Y2G9 1366 aa14.27□□□□□ -0.12
PHGDH-222ENST00000641587 ZNF827Q17R98 1081 aa14.27□□□□□ -0.13
PHGDH-222ENST00000641587 ZNF784Q8NCA9 323 aaPredicted RBP14.27□□□□□ -0.13
PHGDH-222ENST00000641587 MTFR1LQ9H019 292 aa14.27□□□□□ -0.13
PHGDH-222ENST00000641587 CHD4Q14839 1912 aa14.25□□□□□ -0.13
PHGDH-222ENST00000641587 IL2RBP14784 551 aa14.25□□□□□ -0.13
PHGDH-222ENST00000641587 ANKRD24Q8TF21 1146 aa14.25□□□□□ -0.13
PHGDH-222ENST00000641587 LRRC4BQ9NT99 713 aa14.25□□□□□ -0.13
PHGDH-222ENST00000641587 TMC1Q8TDI8 760 aa14.24□□□□□ -0.13
PHGDH-222ENST00000641587 TUBGCP6Q96RT7 1819 aa14.23□□□□□ -0.13
PHGDH-222ENST00000641587 SLC12A5Q9H2X9 1139 aa14.23□□□□□ -0.13
PHGDH-222ENST00000641587 A0A1W2PP64 1363 aa14.22□□□□□ -0.13
PHGDH-222ENST00000641587 ARXQ96QS3 562 aa14.22□□□□□ -0.13
PHGDH-222ENST00000641587 KCNQ4P56696 695 aa14.21□□□□□ -0.13
PHGDH-222ENST00000641587 LTV1Q96GA3 475 aaPredicted RBP14.21□□□□□ -0.13
PHGDH-222ENST00000641587 EDC4Q6P2E9 1401 aaKnown RBP14.21□□□□□ -0.13
PHGDH-222ENST00000641587 DOT1LQ8TEK3 1739 aa14.21□□□□□ -0.14
PHGDH-222ENST00000641587 RGPD2P0DJD1 1756 aa14.2□□□□□ -0.14
PHGDH-222ENST00000641587 DDX54Q8TDD1 881 aaKnown RBP14.2□□□□□ -0.14
PHGDH-222ENST00000641587 CARD11Q9BXL7 1154 aa14.2□□□□□ -0.14
PHGDH-222ENST00000641587 SHANK3Q9BYB0 1731 aa14.2□□□□□ -0.14
PHGDH-222ENST00000641587 QSER1Q2KHR3 1735 aa14.19□□□□□ -0.14
PHGDH-222ENST00000641587 HDGFL2Q7Z4V5 671 aaPredicted RBP14.19□□□□□ -0.14
PHGDH-222ENST00000641587 KLHL34Q8N239 644 aa14.19□□□□□ -0.14
PHGDH-222ENST00000641587 AKT1S1Q96B36 256 aa14.19□□□□□ -0.14
PHGDH-222ENST00000641587 FAM208AQ9UK61 1670 aaKnown RBP14.19□□□□□ -0.14
PHGDH-222ENST00000641587 MAP3K5Q99683 1374 aa14.19□□□□□ -0.14
PHGDH-222ENST00000641587 FBLN1P23142 703 aa14.18□□□□□ -0.14
PHGDH-222ENST00000641587 COL24A1Q17RW2 1714 aa14.18□□□□□ -0.14
PHGDH-222ENST00000641587 PNPLA7Q6ZV29 1317 aa14.17□□□□□ -0.14
PHGDH-222ENST00000641587 LY75O60449 1722 aa14.16□□□□□ -0.14
PHGDH-222ENST00000641587 IP6K1Q92551 441 aa14.16□□□□□ -0.14
PHGDH-222ENST00000641587 SYTL4Q96C24 671 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-222ENST00000641587 NSD2O96028 1365 aa14.16□□□□□ -0.14
PHGDH-222ENST00000641587 MEGF6O75095 1541 aa14.15□□□□□ -0.14
PHGDH-222ENST00000641587 SENP3-EIF4A1A0A087X0R7 540 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms