RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 ABCA5Q8WWZ7 1642 aa13.3□□□□□ -0.28
SCN1B-208ENST00000640135 KRT28Q7Z3Y7 464 aa13.3□□□□□ -0.28
SCN1B-208ENST00000640135 NAP1L5Q96NT1 182 aaPredicted RBP13.3□□□□□ -0.28
SCN1B-208ENST00000640135 GOLGA6L19H0YKK7 550 aa13.3□□□□□ -0.28
SCN1B-208ENST00000640135 TTC39AQ5SRH9 613 aa13.3□□□□□ -0.28
SCN1B-208ENST00000640135 BECN2A8MW95 431 aa13.3□□□□□ -0.28
SCN1B-208ENST00000640135 HSP90AB3PQ58FF7 597 aa13.3□□□□□ -0.28
SCN1B-208ENST00000640135 A2MP01023 1474 aa13.3□□□□□ -0.28
SCN1B-208ENST00000640135 EXOC5O00471 708 aa13.29□□□□□ -0.28
SCN1B-208ENST00000640135 CREBRFQ8IUR6 639 aa13.29□□□□□ -0.28
SCN1B-208ENST00000640135 NUCB2P80303 420 aa13.29□□□□□ -0.28
SCN1B-208ENST00000640135 TEX13AQ9BXU3 409 aaPredicted RBP13.29□□□□□ -0.28
SCN1B-208ENST00000640135 CEP126Q9P2H0 1117 aa13.29□□□□□ -0.28
SCN1B-208ENST00000640135 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.29□□□□□ -0.28
SCN1B-208ENST00000640135 ADGRF5Q8IZF2 1346 aa13.29□□□□□ -0.28
SCN1B-208ENST00000640135 PPP1R1BQ9UD71 204 aaPredicted RBP13.29□□□□□ -0.28
SCN1B-208ENST00000640135 RAPGEF6Q8TEU7 1601 aa13.29□□□□□ -0.28
SCN1B-208ENST00000640135 SCAF11Q99590 1463 aaKnown RBP13.28□□□□□ -0.28
SCN1B-208ENST00000640135 GZF1Q9H116 711 aaPredicted RBP13.28□□□□□ -0.28
SCN1B-208ENST00000640135 MCM2P49736 904 aa13.28□□□□□ -0.28
SCN1B-208ENST00000640135 ABCC2Q92887 1545 aa13.28□□□□□ -0.28
SCN1B-208ENST00000640135 PBRM1Q86U86 1689 aa13.28□□□□□ -0.28
SCN1B-208ENST00000640135 ATF7IPQ6VMQ6 1270 aa13.28□□□□□ -0.28
SCN1B-208ENST00000640135 NOC3LQ8WTT2 800 aaKnown RBP13.28□□□□□ -0.28
SCN1B-208ENST00000640135 IGHMBP2P38935 993 aaKnown RBP13.28□□□□□ -0.28
SCN1B-208ENST00000640135 NPHP3Q7Z494 1330 aa13.28□□□□□ -0.28
SCN1B-208ENST00000640135 ABCC10Q5T3U5 1492 aa13.28□□□□□ -0.28
SCN1B-208ENST00000640135 NCBP3Q53F19 620 aaKnown RBP13.27□□□□□ -0.28
SCN1B-208ENST00000640135 KIAA0556O60303 1618 aa13.27□□□□□ -0.28
SCN1B-208ENST00000640135 DUOX2Q9NRD8 1548 aa13.27□□□□□ -0.28
SCN1B-208ENST00000640135 NOS1P29475 1434 aa13.27□□□□□ -0.28
SCN1B-208ENST00000640135 FANCIQ9NVI1 1328 aa13.27□□□□□ -0.29
SCN1B-208ENST00000640135 TAF7Q15545 349 aaPredicted RBP13.27□□□□□ -0.29
SCN1B-208ENST00000640135 PES1O00541 588 aaKnown RBP13.27□□□□□ -0.29
SCN1B-208ENST00000640135 FYB1O15117 783 aa13.27□□□□□ -0.29
SCN1B-208ENST00000640135 ZPR1O75312 459 aa13.27□□□□□ -0.29
SCN1B-208ENST00000640135 TMPOP42166 694 aaKnown RBP13.27□□□□□ -0.29
SCN1B-208ENST00000640135 NOB1Q9ULX3 412 aaKnown RBP13.27□□□□□ -0.29
SCN1B-208ENST00000640135 DDX49Q9Y6V7 483 aaKnown RBP13.27□□□□□ -0.29
SCN1B-208ENST00000640135 LARP1Q6PKG0 1096 aaKnown RBP13.27□□□□□ -0.29
SCN1B-208ENST00000640135 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.27□□□□□ -0.29
SCN1B-208ENST00000640135 TARBP1Q13395 1621 aaKnown RBP13.27□□□□□ -0.29
SCN1B-208ENST00000640135 MYL6BP14649 208 aa13.26□□□□□ -0.29
SCN1B-208ENST00000640135 IKQ13123 557 aaPredicted RBP13.26□□□□□ -0.29
SCN1B-208ENST00000640135 CCAR1Q8IX12 1150 aaKnown RBP13.26□□□□□ -0.29
SCN1B-208ENST00000640135 TTC21AQ8NDW8 1320 aa13.26□□□□□ -0.29
SCN1B-208ENST00000640135 RPAP2Q8IXW5 612 aaPredicted RBP13.26□□□□□ -0.29
SCN1B-208ENST00000640135 DNAJC2Q99543 621 aaKnown RBP13.26□□□□□ -0.29
SCN1B-208ENST00000640135 LRRCC1Q9C099 1032 aa13.26□□□□□ -0.29
SCN1B-208ENST00000640135 ADAMTS2O95450 1211 aa13.25□□□□□ -0.29
SCN1B-208ENST00000640135 TSR2Q969E8 191 aaKnown RBP13.25□□□□□ -0.29
SCN1B-208ENST00000640135 IFT57Q9NWB7 429 aa13.25□□□□□ -0.29
SCN1B-208ENST00000640135 PDCP20941 246 aa13.25□□□□□ -0.29
SCN1B-208ENST00000640135 CTTNBP2Q8WZ74 1663 aa13.25□□□□□ -0.29
SCN1B-208ENST00000640135 CHMP5Q9NZZ3 219 aa13.24□□□□□ -0.29
SCN1B-208ENST00000640135 IPO7O95373 1038 aaKnown RBP13.24□□□□□ -0.29
SCN1B-208ENST00000640135 FOXD4L5Q5VV16 416 aaPredicted RBP13.24□□□□□ -0.29
SCN1B-208ENST00000640135 FOXD4L4Q8WXT5 416 aaPredicted RBP13.24□□□□□ -0.29
SCN1B-208ENST00000640135 C22orf23Q9BZE7 217 aa13.24□□□□□ -0.29
SCN1B-208ENST00000640135 NME9Q86XW9 330 aa13.24□□□□□ -0.29
SCN1B-208ENST00000640135 CCDC73Q6ZRK6 1079 aa13.23□□□□□ -0.29
SCN1B-208ENST00000640135 IFNL2Q8IZJ0 200 aa13.23□□□□□ -0.29
SCN1B-208ENST00000640135 BICD2Q8TD16 824 aa13.23□□□□□ -0.29
SCN1B-208ENST00000640135 TMOD2Q9NZR1 351 aa13.23□□□□□ -0.29
SCN1B-208ENST00000640135 CEP170Q5SW79 1584 aa13.23□□□□□ -0.29
SCN1B-208ENST00000640135 AKAP2Q9Y2D5 859 aa13.23□□□□□ -0.29
SCN1B-208ENST00000640135 VPS37CA5D8V6 355 aaPredicted RBP13.23□□□□□ -0.29
SCN1B-208ENST00000640135 CDCA7LQ96GN5 454 aa13.22□□□□□ -0.29
SCN1B-208ENST00000640135 FMNL2Q96PY5 1086 aa13.22□□□□□ -0.29
SCN1B-208ENST00000640135 CTNNA3Q9UI47 895 aa13.22□□□□□ -0.29
SCN1B-208ENST00000640135 R3HCC1Q9Y3T6 440 aaKnown RBP13.22□□□□□ -0.29
SCN1B-208ENST00000640135 PUS7Q96PZ0 661 aaKnown RBP13.22□□□□□ -0.29
SCN1B-208ENST00000640135 UBAP1LF5GYI3 381 aa13.22□□□□□ -0.29
SCN1B-208ENST00000640135 NUP153P49790 1475 aaKnown RBP13.21□□□□□ -0.29
SCN1B-208ENST00000640135 SRGAP3O43295 1099 aa13.21□□□□□ -0.29
SCN1B-208ENST00000640135 ANKRD1Q15327 319 aa13.21□□□□□ -0.29
SCN1B-208ENST00000640135 RPRD2Q5VT52 1461 aaKnown RBP13.21□□□□□ -0.29
SCN1B-208ENST00000640135 MVPQ14764 893 aaKnown RBP13.21□□□□□ -0.29
SCN1B-208ENST00000640135 ALDH1L2Q3SY69 923 aa13.21□□□□□ -0.29
SCN1B-208ENST00000640135 DUSP27Q5VZP5 1158 aa13.21□□□□□ -0.29
SCN1B-208ENST00000640135 SAMD1Q6SPF0 538 aaPredicted RBP13.2□□□□□ -0.3
SCN1B-208ENST00000640135 HYPKQ9NX55 129 aa13.2□□□□□ -0.3
SCN1B-208ENST00000640135 A0A087WZG4 1122 aa13.2□□□□□ -0.3
SCN1B-208ENST00000640135 PTCD1O75127 700 aaKnown RBP13.2□□□□□ -0.3
SCN1B-208ENST00000640135 C19orf44Q9H6X5 657 aa13.2□□□□□ -0.3
SCN1B-208ENST00000640135 ACEP12821 1306 aa13.2□□□□□ -0.3
SCN1B-208ENST00000640135 ZNF287Q9HBT7 754 aa13.2□□□□□ -0.3
SCN1B-208ENST00000640135 ANKRD36BQ8N2N9 1353 aa13.19□□□□□ -0.3
SCN1B-208ENST00000640135 DBF4Q9UBU7 674 aaPredicted RBP13.19□□□□□ -0.3
SCN1B-208ENST00000640135 IFIT1P09914 478 aaKnown RBP13.19□□□□□ -0.3
SCN1B-208ENST00000640135 ITSN2Q9NZM3 1697 aa13.19□□□□□ -0.3
SCN1B-208ENST00000640135 RIMS2Q9UQ26 1411 aa13.19□□□□□ -0.3
SCN1B-208ENST00000640135 RABEP1Q15276 862 aa13.19□□□□□ -0.3
SCN1B-208ENST00000640135 TRIM22Q8IYM9 498 aa13.18□□□□□ -0.3
SCN1B-208ENST00000640135 RAB11FIP3O75154 756 aa13.18□□□□□ -0.3
SCN1B-208ENST00000640135 WDHD1O75717 1129 aaPredicted RBP13.18□□□□□ -0.3
SCN1B-208ENST00000640135 CAVIN4Q5BKX8 364 aa13.18□□□□□ -0.3
SCN1B-208ENST00000640135 RBM5P52756 815 aaKnown RBP eCLIP13.18□□□□□ -0.3
SCN1B-208ENST00000640135 MPRIPQ6WCQ1 1025 aa13.18□□□□□ -0.3
SCN1B-208ENST00000640135 TXLNAP40222 546 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms