RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 FOSL1P15407 271 aa5.15□□□□□ -1.59
SCN3A-209ENST00000639244 GUCY2CP25092 1073 aa5.15□□□□□ -1.59
SCN3A-209ENST00000639244 UIMC1Q96RL1 719 aa5.15□□□□□ -1.59
SCN3A-209ENST00000639244 MAF1Q9H063 256 aa5.15□□□□□ -1.59
SCN3A-209ENST00000639244 TRAF1Q13077 416 aa5.15□□□□□ -1.59
SCN3A-209ENST00000639244 CLEC4GQ6UXB4 293 aa5.15□□□□□ -1.59
SCN3A-209ENST00000639244 PNISRQ8TF01 805 aaKnown RBP5.15□□□□□ -1.59
SCN3A-209ENST00000639244 TMED1Q13445 227 aa5.14□□□□□ -1.59
SCN3A-209ENST00000639244 ZSCAN30Q86W11 494 aa5.14□□□□□ -1.59
SCN3A-209ENST00000639244 PPFIA3O75145 1194 aa5.14□□□□□ -1.59
SCN3A-209ENST00000639244 TEKT1Q969V4 418 aa5.14□□□□□ -1.59
SCN3A-209ENST00000639244 PPFIA4O75335 1185 aa5.14□□□□□ -1.59
SCN3A-209ENST00000639244 PDCL2Q8N4E4 241 aa5.14□□□□□ -1.59
SCN3A-209ENST00000639244 PAF1Q8N7H5 531 aa5.14□□□□□ -1.59
SCN3A-209ENST00000639244 FEZ1Q99689 392 aa5.14□□□□□ -1.59
SCN3A-209ENST00000639244 DZIP3Q86Y13 1208 aaKnown RBP5.14□□□□□ -1.59
SCN3A-209ENST00000639244 NAT1P18440 290 aa5.14□□□□□ -1.59
SCN3A-209ENST00000639244 RPUSD2Q8IZ73 545 aaKnown RBP5.14□□□□□ -1.59
SCN3A-209ENST00000639244 PUF60Q9UHX1 559 aaKnown RBP5.14□□□□□ -1.59
SCN3A-209ENST00000639244 ZNF777Q9ULD5 760 aaPredicted RBP5.14□□□□□ -1.59
SCN3A-209ENST00000639244 hCG_2014768A0A024R1R8 64 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 CCT2P78371 535 aaKnown RBP5.13□□□□□ -1.59
SCN3A-209ENST00000639244 SEPT14Q6ZU15 432 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 VDRP11473 427 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 GPS2Q13227 327 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 RNF214Q8ND24 703 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 LSM14AQ8ND56 463 aaKnown RBP5.13□□□□□ -1.59
SCN3A-209ENST00000639244 MIPOL1Q8TD10 442 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 SMCR8Q8TEV9 937 aaPredicted RBP5.13□□□□□ -1.59
SCN3A-209ENST00000639244 PAGR1Q9BTK6 254 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 RPS6KL1Q9Y6S9 549 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 IGF1RP08069 1367 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 KCNA2P16389 499 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 DBN1Q16643 649 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 ZNF396Q96N95 335 aaPredicted RBP5.13□□□□□ -1.59
SCN3A-209ENST00000639244 GNL3LQ9NVN8 582 aaKnown RBP5.13□□□□□ -1.59
SCN3A-209ENST00000639244 IKBKGQ9Y6K9 419 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 MKRN3Q13064 507 aaKnown RBP5.13□□□□□ -1.59
SCN3A-209ENST00000639244 NUTM1Q86Y26 1132 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 MAGEA8P43361 318 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 FLIIQ13045 1269 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 CC2D1AQ6P1N0 951 aaPredicted RBP5.13□□□□□ -1.59
SCN3A-209ENST00000639244 CXorf56Q9H5V9 222 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 TOMM22Q9NS69 142 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 GOLGA6L19H0YKK7 550 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 CDR1P51861 262 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 E2F5Q15329 346 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 GABBR1Q9UBS5 961 aa5.13□□□□□ -1.59
SCN3A-209ENST00000639244 C16orf87Q6PH81 154 aa5.12□□□□□ -1.59
SCN3A-209ENST00000639244 BHMTQ93088 406 aa5.12□□□□□ -1.59
SCN3A-209ENST00000639244 VIRMAQ69YN4 1812 aaKnown RBP5.12□□□□□ -1.59
SCN3A-209ENST00000639244 DZIP1Q86YF9 867 aaKnown RBP5.12□□□□□ -1.59
SCN3A-209ENST00000639244 ZC3H12AQ5D1E8 599 aaKnown RBP5.12□□□□□ -1.59
SCN3A-209ENST00000639244 CHCHD4Q8N4Q1 142 aa5.12□□□□□ -1.59
SCN3A-209ENST00000639244 AK7Q96M32 723 aa5.12□□□□□ -1.59
SCN3A-209ENST00000639244 SH3GL3Q99963 347 aa5.12□□□□□ -1.59
SCN3A-209ENST00000639244 ZHX3Q9H4I2 956 aa5.12□□□□□ -1.59
SCN3A-209ENST00000639244 VEZTQ9HBM0 779 aa5.12□□□□□ -1.59
SCN3A-209ENST00000639244 PPFIA2O75334 1257 aa5.12□□□□□ -1.59
SCN3A-209ENST00000639244 CAPN2P17655 700 aa5.12□□□□□ -1.59
SCN3A-209ENST00000639244 VCAM1P19320 739 aa5.12□□□□□ -1.59
SCN3A-209ENST00000639244 CBX1P83916 185 aa5.12□□□□□ -1.59
SCN3A-209ENST00000639244 FAM160A1Q05DH4 1040 aa5.12□□□□□ -1.59
SCN3A-209ENST00000639244 BARGINQ6ZT62 677 aa5.12□□□□□ -1.59
SCN3A-209ENST00000639244 PDZRN3Q9UPQ7 1066 aa5.12□□□□□ -1.59
SCN3A-209ENST00000639244 PMM1Q92871 262 aa5.12□□□□□ -1.59
SCN3A-209ENST00000639244 CRACR2AQ9BSW2 395 aa5.12□□□□□ -1.59
SCN3A-209ENST00000639244 SENP3Q9H4L4 574 aaPredicted RBP5.12□□□□□ -1.59
SCN3A-209ENST00000639244 SERPINA10Q9UK55 444 aa5.12□□□□□ -1.59
SCN3A-209ENST00000639244 TSPY4P0CV99 314 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 TSPY10P0CW01 314 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 U2AF1L5P0DN76 240 aaPredicted RBP5.11□□□□□ -1.59
SCN3A-209ENST00000639244 IGBP1P78318 339 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 SRPK2P78362 688 aaKnown RBP5.11□□□□□ -1.59
SCN3A-209ENST00000639244 U2AF1Q01081 240 aaKnown RBP eCLIP5.11□□□□□ -1.59
SCN3A-209ENST00000639244 IFT88Q13099 833 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 ZSCAN26Q16670 478 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 SPATS2LQ9NUQ6 558 aaKnown RBP5.11□□□□□ -1.59
SCN3A-209ENST00000639244 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.11□□□□□ -1.59
SCN3A-209ENST00000639244 CCDC189A1A4V9 331 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 ANKRD18BA2A2Z9 1011 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 ARPC5LQ9BPX5 153 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 RWDD1Q9H446 243 aaPredicted RBP5.11□□□□□ -1.59
SCN3A-209ENST00000639244 SASS6Q6UVJ0 657 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 TPM1P09493 284 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 PRPF4BQ13523 1007 aaKnown RBP5.11□□□□□ -1.59
SCN3A-209ENST00000639244 TEX35Q5T0J7 233 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 C1QTNF12Q5T7M4 302 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 TDRD7Q8NHU6 1098 aaKnown RBP5.11□□□□□ -1.59
SCN3A-209ENST00000639244 POLR3CQ9BUI4 534 aaPredicted RBP5.11□□□□□ -1.59
SCN3A-209ENST00000639244 ETAA1Q9NY74 926 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 HS1BP3Q53T59 392 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 TTC30BQ8N4P2 665 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 CDC5LQ99459 802 aaKnown RBP5.11□□□□□ -1.59
SCN3A-209ENST00000639244 LZTS2Q9BRK4 669 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 TULP2O00295 520 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 KIAA0754O94854 1291 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 UBE2Q1Q7Z7E8 422 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 TRIM74Q86UV6 250 aa5.11□□□□□ -1.59
SCN3A-209ENST00000639244 TRIM73Q86UV7 250 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms