RNA–Protein interactions for RNA: ENST00000639053.1

SPIN3-219, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,778 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-219ENST00000639053 PHRF1Q9P1Y6 1649 aaKnown RBP20.12■□□□□ 0.81
SPIN3-219ENST00000639053 UBAP1LF5GYI3 381 aa20.12■□□□□ 0.81
SPIN3-219ENST00000639053 PIP4K2BP78356 416 aa20.12■□□□□ 0.81
SPIN3-219ENST00000639053 LTN1O94822 1766 aa20.12■□□□□ 0.81
SPIN3-219ENST00000639053 AHDC1Q5TGY3 1603 aaPredicted RBP20.11■□□□□ 0.81
SPIN3-219ENST00000639053 ARHGEF25Q86VW2 580 aa20.11■□□□□ 0.81
SPIN3-219ENST00000639053 CERKQ8TCT0 537 aa20.11■□□□□ 0.81
SPIN3-219ENST00000639053 IQSEC2Q5JU85 1478 aa20.11■□□□□ 0.81
SPIN3-219ENST00000639053 CRYBG1Q9Y4K1 1723 aa20.11■□□□□ 0.81
SPIN3-219ENST00000639053 SALL2Q9Y467 1007 aaPredicted RBP20.11■□□□□ 0.81
SPIN3-219ENST00000639053 RTL1A6NKG5 1358 aa20.1■□□□□ 0.81
SPIN3-219ENST00000639053 ZC3H6P61129 1189 aaKnown RBP20.09■□□□□ 0.81
SPIN3-219ENST00000639053 IP6K1Q92551 441 aa20.09■□□□□ 0.81
SPIN3-219ENST00000639053 RUNDC1Q96C34 613 aa20.09■□□□□ 0.81
SPIN3-219ENST00000639053 APAF1O14727 1248 aa20.08■□□□□ 0.8
SPIN3-219ENST00000639053 HMOX1P09601 288 aa20.07■□□□□ 0.8
SPIN3-219ENST00000639053 PLEKHF1Q96S99 279 aa20.06■□□□□ 0.8
SPIN3-219ENST00000639053 PDE3BQ13370 1112 aa20.06■□□□□ 0.8
SPIN3-219ENST00000639053 LRRC59Q96AG4 307 aaKnown RBP20.06■□□□□ 0.8
SPIN3-219ENST00000639053 LTV1Q96GA3 475 aaPredicted RBP20.06■□□□□ 0.8
SPIN3-219ENST00000639053 RSPH6AQ9H0K4 717 aa20.06■□□□□ 0.8
SPIN3-219ENST00000639053 FCHSD2O94868 740 aa20.05■□□□□ 0.8
SPIN3-219ENST00000639053 RGPD1P0DJD0 1748 aa20.04■□□□□ 0.8
SPIN3-219ENST00000639053 PHLPP1O60346 1717 aa20.04■□□□□ 0.8
SPIN3-219ENST00000639053 AEBP1Q8IUX7 1158 aa20.03■□□□□ 0.8
SPIN3-219ENST00000639053 TCP11L2Q8N4U5 519 aa20.03■□□□□ 0.8
SPIN3-219ENST00000639053 PRKAR2BP31323 418 aa20.03■□□□□ 0.8
SPIN3-219ENST00000639053 COL16A1Q07092 1604 aaPredicted RBP20.02■□□□□ 0.8
SPIN3-219ENST00000639053 ABCA3Q99758 1704 aa20.02■□□□□ 0.8
SPIN3-219ENST00000639053 SULT6B1Q6IMI4 303 aa20.02■□□□□ 0.8
SPIN3-219ENST00000639053 EYA1Q99502 592 aa20.02■□□□□ 0.8
SPIN3-219ENST00000639053 AXIN2Q9Y2T1 843 aa20.02■□□□□ 0.8
SPIN3-219ENST00000639053 RRP7AQ9Y3A4 280 aaKnown RBP20.02■□□□□ 0.8
SPIN3-219ENST00000639053 RNF123Q5XPI4 1314 aa20.02■□□□□ 0.79
SPIN3-219ENST00000639053 KIAA0232Q92628 1395 aa20.02■□□□□ 0.79
SPIN3-219ENST00000639053 HAP1P54257 671 aaPredicted RBP20.01■□□□□ 0.79
SPIN3-219ENST00000639053 PNNQ9H307 717 aaKnown RBP20.01■□□□□ 0.79
SPIN3-219ENST00000639053 CPDO75976 1380 aa20.01■□□□□ 0.79
SPIN3-219ENST00000639053 CHRNA2Q15822 529 aa20■□□□□ 0.79
SPIN3-219ENST00000639053 IGSF1Q8N6C5 1336 aa20■□□□□ 0.79
SPIN3-219ENST00000639053 MAPK8IP3Q9UPT6 1336 aa20■□□□□ 0.79
SPIN3-219ENST00000639053 COL18A1P39060 1754 aa19.99■□□□□ 0.79
SPIN3-219ENST00000639053 NEUROD2Q15784 382 aa19.98■□□□□ 0.79
SPIN3-219ENST00000639053 ANKRD24Q8TF21 1146 aa19.98■□□□□ 0.79
SPIN3-219ENST00000639053 PHACTR3Q96KR7 559 aa19.98■□□□□ 0.79
SPIN3-219ENST00000639053 COL22A1Q8NFW1 1626 aaPredicted RBP19.97■□□□□ 0.79
SPIN3-219ENST00000639053 RGPD5Q99666 1765 aa19.97■□□□□ 0.79
SPIN3-219ENST00000639053 ZNF521Q96K83 1311 aa19.96■□□□□ 0.79
SPIN3-219ENST00000639053 TMPOP42166 694 aaKnown RBP19.96■□□□□ 0.79
SPIN3-219ENST00000639053 NBPF6Q5VWK0 638 aa19.96■□□□□ 0.79
SPIN3-219ENST00000639053 NGEFQ8N5V2 710 aa19.96■□□□□ 0.79
SPIN3-219ENST00000639053 USHBP1Q8N6Y0 703 aa19.96■□□□□ 0.79
SPIN3-219ENST00000639053 NBPF4Q96M43 638 aa19.96■□□□□ 0.79
SPIN3-219ENST00000639053 PRDM11Q9NQV5 511 aa19.96■□□□□ 0.79
SPIN3-219ENST00000639053 KDRP35968 1356 aa19.96■□□□□ 0.79
SPIN3-219ENST00000639053 NEFMP07197 916 aa19.95■□□□□ 0.78
SPIN3-219ENST00000639053 PPP4R2Q9NY27 417 aa19.95■□□□□ 0.78
SPIN3-219ENST00000639053 ABCC6O95255 1503 aa19.95■□□□□ 0.78
SPIN3-219ENST00000639053 CDCA7LQ96GN5 454 aa19.94■□□□□ 0.78
SPIN3-219ENST00000639053 ERBB3P21860 1342 aa19.93■□□□□ 0.78
SPIN3-219ENST00000639053 RGPD2P0DJD1 1756 aa19.93■□□□□ 0.78
SPIN3-219ENST00000639053 WWC1Q8IX03 1113 aa19.93■□□□□ 0.78
SPIN3-219ENST00000639053 PHF23Q9BUL5 403 aaPredicted RBP19.93■□□□□ 0.78
SPIN3-219ENST00000639053 NFE2L2Q16236 605 aa19.92■□□□□ 0.78
SPIN3-219ENST00000639053 LMO7Q8WWI1 1683 aa19.91■□□□□ 0.78
SPIN3-219ENST00000639053 RIPK4P57078 832 aa19.91■□□□□ 0.78
SPIN3-219ENST00000639053 CCDC27Q2M243 656 aa19.91■□□□□ 0.78
SPIN3-219ENST00000639053 NCBP3Q53F19 620 aaKnown RBP19.91■□□□□ 0.78
SPIN3-219ENST00000639053 CAMTA1Q9Y6Y1 1673 aa19.91■□□□□ 0.78
SPIN3-219ENST00000639053 FAM83GA6ND36 823 aa19.9■□□□□ 0.78
SPIN3-219ENST00000639053 TRIM35Q9UPQ4 493 aa19.9■□□□□ 0.78
SPIN3-219ENST00000639053 GOLGA2Q08379 1002 aa19.9■□□□□ 0.78
SPIN3-219ENST00000639053 NCAPD2Q15021 1401 aa19.89■□□□□ 0.77
SPIN3-219ENST00000639053 CSB-PGBD3P0DP91 1061 aa19.88■□□□□ 0.77
SPIN3-219ENST00000639053 IRX6P78412 446 aaPredicted RBP19.88■□□□□ 0.77
SPIN3-219ENST00000639053 NLRP2Q9NX02 1062 aa19.88■□□□□ 0.77
SPIN3-219ENST00000639053 SPINK5Q9NQ38 1064 aaPredicted RBP19.88■□□□□ 0.77
SPIN3-219ENST00000639053 COL5A2P05997 1499 aaPredicted RBP19.86■□□□□ 0.77
SPIN3-219ENST00000639053 SLFN5Q08AF3 891 aa19.86■□□□□ 0.77
SPIN3-219ENST00000639053 MTHFSDQ2M296 383 aaKnown RBP19.86■□□□□ 0.77
SPIN3-219ENST00000639053 NUTM2BA6NNL0 878 aaPredicted RBP19.85■□□□□ 0.77
SPIN3-219ENST00000639053 NUTM2EB1AL46 878 aaPredicted RBP19.85■□□□□ 0.77
SPIN3-219ENST00000639053 NUTM2AQ8IVF1 878 aaPredicted RBP19.85■□□□□ 0.77
SPIN3-219ENST00000639053 WDR63Q8IWG1 891 aa19.85■□□□□ 0.77
SPIN3-219ENST00000639053 ADAMTS2O95450 1211 aa19.85■□□□□ 0.77
SPIN3-219ENST00000639053 JCADQ9P266 1359 aa19.84■□□□□ 0.77
SPIN3-219ENST00000639053 TSHZ2Q9NRE2 1034 aa19.84■□□□□ 0.77
SPIN3-219ENST00000639053 COL14A1Q05707 1796 aaKnown RBP19.84■□□□□ 0.77
SPIN3-219ENST00000639053 WDR17Q8IZU2 1322 aa19.84■□□□□ 0.77
SPIN3-219ENST00000639053 FAM208AQ9UK61 1670 aaKnown RBP19.84■□□□□ 0.77
SPIN3-219ENST00000639053 HSPA1LP34931 641 aa19.83■□□□□ 0.77
SPIN3-219ENST00000639053 STRN4Q9NRL3 753 aa19.83■□□□□ 0.77
SPIN3-219ENST00000639053 DUSP27Q5VZP5 1158 aa19.83■□□□□ 0.76
SPIN3-219ENST00000639053 BTG4Q9NY30 223 aa19.83■□□□□ 0.76
SPIN3-219ENST00000639053 DLG5Q8TDM6 1919 aa19.82■□□□□ 0.76
SPIN3-219ENST00000639053 E9PSI1 815 aa19.82■□□□□ 0.76
SPIN3-219ENST00000639053 TRMT2AQ8IZ69 625 aaKnown RBP19.82■□□□□ 0.76
SPIN3-219ENST00000639053 GAS2L2Q8NHY3 880 aa19.82■□□□□ 0.76
SPIN3-219ENST00000639053 THUMPD2Q9BTF0 503 aaKnown RBP19.82■□□□□ 0.76
SPIN3-219ENST00000639053 RCAN3Q9UKA8 241 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms