RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-238ENST00000638755 ACEP12821 1306 aa17.42■□□□□ 0.38
PAX6-238ENST00000638755 GCP02774 474 aa17.41■□□□□ 0.38
PAX6-238ENST00000638755 TOM1L2Q6ZVM7 507 aa17.4■□□□□ 0.38
PAX6-238ENST00000638755 USP19O94966 1318 aa17.4■□□□□ 0.38
PAX6-238ENST00000638755 MAP3K5Q99683 1374 aa17.39■□□□□ 0.37
PAX6-238ENST00000638755 GOLGB1Q14789 3259 aaKnown RBP17.38■□□□□ 0.37
PAX6-238ENST00000638755 NLRP13Q86W25 1043 aa17.38■□□□□ 0.37
PAX6-238ENST00000638755 CDK19Q9BWU1 502 aa17.38■□□□□ 0.37
PAX6-238ENST00000638755 POLR3AO14802 1390 aaPredicted RBP17.38■□□□□ 0.37
PAX6-238ENST00000638755 KDM2AQ9Y2K7 1162 aa17.36■□□□□ 0.37
PAX6-238ENST00000638755 SHANK3Q9BYB0 1731 aa17.35■□□□□ 0.37
PAX6-238ENST00000638755 BCL9O00512 1426 aa17.34■□□□□ 0.37
PAX6-238ENST00000638755 AKAP12Q02952 1782 aa17.34■□□□□ 0.37
PAX6-238ENST00000638755 CCDC61Q9Y6R9 512 aa17.34■□□□□ 0.37
PAX6-238ENST00000638755 PLEKHG3A1L390 1219 aa17.33■□□□□ 0.36
PAX6-238ENST00000638755 AATKQ6ZMQ8 1374 aa17.32■□□□□ 0.36
PAX6-238ENST00000638755 CDCA7Q9BWT1 371 aaPredicted RBP17.32■□□□□ 0.36
PAX6-238ENST00000638755 TOPAZ1Q8N9V7 1692 aa17.31■□□□□ 0.36
PAX6-238ENST00000638755 WDR17Q8IZU2 1322 aa17.3■□□□□ 0.36
PAX6-238ENST00000638755 EXOC5O00471 708 aa17.3■□□□□ 0.36
PAX6-238ENST00000638755 ZNF827Q17R98 1081 aa17.3■□□□□ 0.36
PAX6-238ENST00000638755 ACSBG1Q96GR2 724 aa17.3■□□□□ 0.36
PAX6-238ENST00000638755 AXIN2Q9Y2T1 843 aa17.3■□□□□ 0.36
PAX6-238ENST00000638755 WNK3Q9BYP7 1800 aa17.3■□□□□ 0.36
PAX6-238ENST00000638755 POLD1P28340 1107 aa17.29■□□□□ 0.36
PAX6-238ENST00000638755 NLRP6P59044 892 aa17.29■□□□□ 0.36
PAX6-238ENST00000638755 NLGN2Q8NFZ4 835 aa17.29■□□□□ 0.36
PAX6-238ENST00000638755 DCAF11Q8TEB1 546 aa17.29■□□□□ 0.36
PAX6-238ENST00000638755 ARHGEF28Q8N1W1 1705 aaKnown RBP17.29■□□□□ 0.36
PAX6-238ENST00000638755 CSB-PGBD3P0DP91 1061 aa17.28■□□□□ 0.36
PAX6-238ENST00000638755 HSPA6P17066 643 aa17.28■□□□□ 0.36
PAX6-238ENST00000638755 ATP10DQ9P241 1426 aa17.27■□□□□ 0.35
PAX6-238ENST00000638755 PAPPAQ13219 1627 aa17.26■□□□□ 0.35
PAX6-238ENST00000638755 YBX3P16989 372 aaKnown RBP eCLIP17.26■□□□□ 0.35
PAX6-238ENST00000638755 GPBP1L1Q9HC44 474 aaPredicted RBP17.26■□□□□ 0.35
PAX6-238ENST00000638755 GRIN3BO60391 1043 aa17.25■□□□□ 0.35
PAX6-238ENST00000638755 PPIP5K1Q6PFW1 1433 aa17.24■□□□□ 0.35
PAX6-238ENST00000638755 ZNF526Q8TF50 670 aaPredicted RBP17.24■□□□□ 0.35
PAX6-238ENST00000638755 CARD10Q9BWT7 1032 aa17.24■□□□□ 0.35
PAX6-238ENST00000638755 LRRC4BQ9NT99 713 aa17.24■□□□□ 0.35
PAX6-238ENST00000638755 COL18A1P39060 1754 aa17.24■□□□□ 0.35
PAX6-238ENST00000638755 SRPK2P78362 688 aaKnown RBP17.23■□□□□ 0.35
PAX6-238ENST00000638755 SLC16A10Q8TF71 515 aa17.23■□□□□ 0.35
PAX6-238ENST00000638755 NHSQ6T4R5 1651 aa17.23■□□□□ 0.35
PAX6-238ENST00000638755 SLIT3O75094 1523 aa17.22■□□□□ 0.35
PAX6-238ENST00000638755 SOX12O15370 315 aa17.22■□□□□ 0.35
PAX6-238ENST00000638755 KAT6BQ8WYB5 2073 aa17.21■□□□□ 0.35
PAX6-238ENST00000638755 BRD4O60885 1362 aaPredicted RBP17.21■□□□□ 0.35
PAX6-238ENST00000638755 AKT1S1Q96B36 256 aa17.21■□□□□ 0.35
PAX6-238ENST00000638755 USP6P35125 1406 aa17.21■□□□□ 0.34
PAX6-238ENST00000638755 CPSF1Q10570 1443 aaKnown RBP17.21■□□□□ 0.34
PAX6-238ENST00000638755 TNS2Q63HR2 1409 aa17.21■□□□□ 0.34
PAX6-238ENST00000638755 RGPD5Q99666 1765 aa17.2■□□□□ 0.34
PAX6-238ENST00000638755 CABP2Q9NPB3 220 aa17.2■□□□□ 0.34
PAX6-238ENST00000638755 PNPLA7Q6ZV29 1317 aa17.2■□□□□ 0.34
PAX6-238ENST00000638755 TFCP2L1Q9NZI6 479 aa17.19■□□□□ 0.34
PAX6-238ENST00000638755 BTAF1O14981 1849 aa17.19■□□□□ 0.34
PAX6-238ENST00000638755 ARHGEF25Q86VW2 580 aa17.18■□□□□ 0.34
PAX6-238ENST00000638755 CCDC7Q96M83 1385 aa17.17■□□□□ 0.34
PAX6-238ENST00000638755 CABP1Q9NZU7 370 aa17.17■□□□□ 0.34
PAX6-238ENST00000638755 KCNQ4P56696 695 aa17.16■□□□□ 0.34
PAX6-238ENST00000638755 STAC3Q96MF2 364 aa17.15■□□□□ 0.34
PAX6-238ENST00000638755 COL24A1Q17RW2 1714 aa17.15■□□□□ 0.34
PAX6-238ENST00000638755 PIK3C2AO00443 1686 aa17.14■□□□□ 0.33
PAX6-238ENST00000638755 MSH5O43196 834 aa17.14■□□□□ 0.33
PAX6-238ENST00000638755 SLC27A3Q5K4L6 730 aa17.14■□□□□ 0.33
PAX6-238ENST00000638755 KCNH5Q8NCM2 988 aa17.14■□□□□ 0.33
PAX6-238ENST00000638755 TRPM1Q7Z4N2 1603 aa17.14■□□□□ 0.33
PAX6-238ENST00000638755 ABCC6O95255 1503 aa17.13■□□□□ 0.33
PAX6-238ENST00000638755 CAPN15O75808 1086 aa17.13■□□□□ 0.33
PAX6-238ENST00000638755 NLRP2Q9NX02 1062 aa17.13■□□□□ 0.33
PAX6-238ENST00000638755 QSER1Q2KHR3 1735 aa17.13■□□□□ 0.33
PAX6-238ENST00000638755 ADCY9O60503 1353 aa17.12■□□□□ 0.33
PAX6-238ENST00000638755 IL2RBP14784 551 aa17.11■□□□□ 0.33
PAX6-238ENST00000638755 MSL1Q68DK7 614 aa17.11■□□□□ 0.33
PAX6-238ENST00000638755 TUBGCP6Q96RT7 1819 aa17.11■□□□□ 0.33
PAX6-238ENST00000638755 APLP1P51693 650 aa17.09■□□□□ 0.33
PAX6-238ENST00000638755 CENPJQ9HC77 1338 aaPredicted RBP17.08■□□□□ 0.32
PAX6-238ENST00000638755 SYTL4Q96C24 671 aaPredicted RBP17.08■□□□□ 0.32
PAX6-238ENST00000638755 QRICH2Q9H0J4 1663 aa17.07■□□□□ 0.32
PAX6-238ENST00000638755 TTC21BQ7Z4L5 1316 aa17.07■□□□□ 0.32
PAX6-238ENST00000638755 KIF3CO14782 793 aa17.07■□□□□ 0.32
PAX6-238ENST00000638755 NBPF1Q3BBV0 1214 aa17.07■□□□□ 0.32
PAX6-238ENST00000638755 DDX54Q8TDD1 881 aaKnown RBP17.07■□□□□ 0.32
PAX6-238ENST00000638755 WWC3Q9ULE0 1092 aa17.07■□□□□ 0.32
PAX6-238ENST00000638755 COL13A1Q5TAT6 717 aaPredicted RBP17.06■□□□□ 0.32
PAX6-238ENST00000638755 COL23A1Q86Y22 540 aaPredicted RBP17.06■□□□□ 0.32
PAX6-238ENST00000638755 DNAJC5GQ8N7S2 189 aa17.06■□□□□ 0.32
PAX6-238ENST00000638755 ERBB3P21860 1342 aa17.05■□□□□ 0.32
PAX6-238ENST00000638755 CD2APQ9Y5K6 639 aa17.05■□□□□ 0.32
PAX6-238ENST00000638755 NFAT5O94916 1531 aa17.05■□□□□ 0.32
PAX6-238ENST00000638755 PRIM1P49642 420 aaKnown RBP17.03■□□□□ 0.32
PAX6-238ENST00000638755 CCNL1Q9UK58 526 aaPredicted RBP17.03■□□□□ 0.32
PAX6-238ENST00000638755 ZNF692Q9BU19 519 aaPredicted RBP17.02■□□□□ 0.32
PAX6-238ENST00000638755 TTC21AQ8NDW8 1320 aa17.01■□□□□ 0.31
PAX6-238ENST00000638755 ANKRD24Q8TF21 1146 aa17.01■□□□□ 0.31
PAX6-238ENST00000638755 RAB3GAP2Q9H2M9 1393 aa17■□□□□ 0.31
PAX6-238ENST00000638755 KIAA1210Q9ULL0 1709 aa16.99■□□□□ 0.31
PAX6-238ENST00000638755 TNS4Q8IZW8 715 aa16.99■□□□□ 0.31
PAX6-238ENST00000638755 IGSF1Q8N6C5 1336 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms