RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708	IL16	Q14005	1332 aa		13.59	□□□□□ -0.23
STRADA-231	ENST00000638708	ATP2B3	Q16720	1220 aa		13.59	□□□□□ -0.23
STRADA-231	ENST00000638708	TSR2	Q969E8	191 aa	Known RBP	13.59	□□□□□ -0.23
STRADA-231	ENST00000638708	TSPY26P	Q9H489	355 aa		13.59	□□□□□ -0.23
STRADA-231	ENST00000638708	KIF3A	Q9Y496	699 aa		13.59	□□□□□ -0.23
STRADA-231	ENST00000638708	TET3	O43151	1660 aa		13.59	□□□□□ -0.23
STRADA-231	ENST00000638708	TRAPPC8	Q9Y2L5	1435 aa		13.59	□□□□□ -0.23
STRADA-231	ENST00000638708	PKP1	Q13835	747 aa		13.59	□□□□□ -0.23
STRADA-231	ENST00000638708	ANKRD45	Q5TZF3	282 aa		13.58	□□□□□ -0.24
STRADA-231	ENST00000638708	CHMP4B	Q9H444	224 aa	Known RBP	13.58	□□□□□ -0.24
STRADA-231	ENST00000638708	SPTLC3	Q9NUV7	552 aa		13.58	□□□□□ -0.24
STRADA-231	ENST00000638708	CD109	Q6YHK3	1445 aa		13.57	□□□□□ -0.24
STRADA-231	ENST00000638708	QRICH2	Q9H0J4	1663 aa		13.57	□□□□□ -0.24
STRADA-231	ENST00000638708	FKBP5	Q13451	457 aa	Predicted RBP	13.57	□□□□□ -0.24
STRADA-231	ENST00000638708	ZDHHC9	Q9Y397	364 aa		13.57	□□□□□ -0.24
STRADA-231	ENST00000638708	DEPDC5	O75140	1603 aa		13.57	□□□□□ -0.24
STRADA-231	ENST00000638708	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
STRADA-231	ENST00000638708	BCL2L12	Q9HB09	334 aa		13.56	□□□□□ -0.24
STRADA-231	ENST00000638708	PIK3R4	Q99570	1358 aa		13.56	□□□□□ -0.24
STRADA-231	ENST00000638708	NPM1	P06748	294 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
STRADA-231	ENST00000638708	MTHFS	P49914	203 aa		13.56	□□□□□ -0.24
STRADA-231	ENST00000638708	UVSSA	Q2YD98	709 aa		13.56	□□□□□ -0.24
STRADA-231	ENST00000638708	ALDH1L2	Q3SY69	923 aa		13.56	□□□□□ -0.24
STRADA-231	ENST00000638708	RNF214	Q8ND24	703 aa		13.56	□□□□□ -0.24
STRADA-231	ENST00000638708	TSC1	Q92574	1164 aa		13.56	□□□□□ -0.24
STRADA-231	ENST00000638708	JARID2	Q92833	1246 aa	Predicted RBP	13.56	□□□□□ -0.24
STRADA-231	ENST00000638708	SYAP1	Q96A49	352 aa	Predicted RBP	13.56	□□□□□ -0.24
STRADA-231	ENST00000638708	SETBP1	Q9Y6X0	1596 aa		13.56	□□□□□ -0.24
STRADA-231	ENST00000638708	NSD2	O96028	1365 aa		13.56	□□□□□ -0.24
STRADA-231	ENST00000638708	PDCL2	Q8N4E4	241 aa		13.55	□□□□□ -0.24
STRADA-231	ENST00000638708	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.55	□□□□□ -0.24
STRADA-231	ENST00000638708	ST18	O60284	1047 aa		13.55	□□□□□ -0.24
STRADA-231	ENST00000638708	FAM184A	Q8NB25	1140 aa		13.55	□□□□□ -0.24
STRADA-231	ENST00000638708	PTCH1	Q13635	1447 aa		13.54	□□□□□ -0.24
STRADA-231	ENST00000638708	PHF14	O94880	888 aa		13.54	□□□□□ -0.24
STRADA-231	ENST00000638708	ANKRD7	Q92527	254 aa		13.54	□□□□□ -0.24
STRADA-231	ENST00000638708	KIF1B	O60333	1816 aa		13.54	□□□□□ -0.24
STRADA-231	ENST00000638708	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.54	□□□□□ -0.24
STRADA-231	ENST00000638708	BRPF1	P55201	1214 aa	Predicted RBP	13.54	□□□□□ -0.24
STRADA-231	ENST00000638708	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
STRADA-231	ENST00000638708	ZGPAT	Q8N5A5	531 aa	Known RBP	13.54	□□□□□ -0.24
STRADA-231	ENST00000638708	USP26	Q9BXU7	913 aa		13.54	□□□□□ -0.24
STRADA-231	ENST00000638708	GSPT1	P15170	499 aa	Known RBP	13.53	□□□□□ -0.24
STRADA-231	ENST00000638708	TMEM51	Q9NW97	253 aa		13.53	□□□□□ -0.24
STRADA-231	ENST00000638708	ASXL2	Q76L83	1435 aa		13.53	□□□□□ -0.24
STRADA-231	ENST00000638708	NRXN1	Q9ULB1	1477 aa		13.52	□□□□□ -0.24
STRADA-231	ENST00000638708	DIAPH3	Q9NSV4	1193 aa		13.52	□□□□□ -0.24
STRADA-231	ENST00000638708	TRIM35	Q9UPQ4	493 aa		13.52	□□□□□ -0.24
STRADA-231	ENST00000638708	COL3A1	P02461	1466 aa	Predicted RBP	13.52	□□□□□ -0.25
STRADA-231	ENST00000638708	ANKRD36B	Q8N2N9	1353 aa		13.52	□□□□□ -0.25
STRADA-231	ENST00000638708	TMPO	P42166	694 aa	Known RBP	13.52	□□□□□ -0.25
STRADA-231	ENST00000638708	FEZ1	Q99689	392 aa		13.52	□□□□□ -0.25
STRADA-231	ENST00000638708	ARAP3	Q8WWN8	1544 aa		13.51	□□□□□ -0.25
STRADA-231	ENST00000638708	ZBTB7B	O15156	539 aa	Predicted RBP	13.51	□□□□□ -0.25
STRADA-231	ENST00000638708	INTS3	Q68E01	1043 aa	Known RBP	13.51	□□□□□ -0.25
STRADA-231	ENST00000638708	ZNF428	Q96B54	188 aa		13.51	□□□□□ -0.25
STRADA-231	ENST00000638708	KNDC1	Q76NI1	1749 aa		13.5	□□□□□ -0.25
STRADA-231	ENST00000638708	GABPB1	Q06547	395 aa	Predicted RBP	13.5	□□□□□ -0.25
STRADA-231	ENST00000638708	TTC22	Q5TAA0	569 aa		13.5	□□□□□ -0.25
STRADA-231	ENST00000638708	PLEKHF1	Q96S99	279 aa		13.5	□□□□□ -0.25
STRADA-231	ENST00000638708	MROH2A	A6NES4	1674 aa		13.5	□□□□□ -0.25
STRADA-231	ENST00000638708	ANKRD26	Q9UPS8	1709 aa		13.5	□□□□□ -0.25
STRADA-231	ENST00000638708	CTIF	O43310	598 aa	Known RBP	13.49	□□□□□ -0.25
STRADA-231	ENST00000638708	BRD1	O95696	1058 aa		13.49	□□□□□ -0.25
STRADA-231	ENST00000638708	CHAF1A	Q13111	956 aa	Predicted RBP	13.49	□□□□□ -0.25
STRADA-231	ENST00000638708	CFAP70	Q5T0N1	1121 aa		13.49	□□□□□ -0.25
STRADA-231	ENST00000638708	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.49	□□□□□ -0.25
STRADA-231	ENST00000638708	VWDE	Q8N2E2	1590 aa		13.49	□□□□□ -0.25
STRADA-231	ENST00000638708	SPDYE4	A6NLX3	237 aa		13.49	□□□□□ -0.25
STRADA-231	ENST00000638708	PLEKHM2	Q8IWE5	1019 aa		13.49	□□□□□ -0.25
STRADA-231	ENST00000638708	IPO4	Q8TEX9	1081 aa	Known RBP	13.49	□□□□□ -0.25
STRADA-231	ENST00000638708	ABCC1	P33527	1531 aa		13.49	□□□□□ -0.25
STRADA-231	ENST00000638708	AFAP1	Q8N556	730 aa		13.48	□□□□□ -0.25
STRADA-231	ENST00000638708	OGFR	Q9NZT2	677 aa		13.48	□□□□□ -0.25
STRADA-231	ENST00000638708	U2AF2	P26368	475 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
STRADA-231	ENST00000638708	SIRT2	Q8IXJ6	389 aa		13.48	□□□□□ -0.25
STRADA-231	ENST00000638708	ARHGAP45	Q92619	1136 aa		13.48	□□□□□ -0.25
STRADA-231	ENST00000638708	ZNF830	Q96NB3	372 aa	Predicted RBP	13.48	□□□□□ -0.25
STRADA-231	ENST00000638708	TTC12	Q9H892	705 aa	Predicted RBP	13.48	□□□□□ -0.25
STRADA-231	ENST00000638708	SPAG9	O60271	1321 aa	Known RBP	13.48	□□□□□ -0.25
STRADA-231	ENST00000638708	ZBTB7C	A1YPR0	619 aa		13.47	□□□□□ -0.25
STRADA-231	ENST00000638708	FAM177B	A6PVY3	158 aa		13.47	□□□□□ -0.25
STRADA-231	ENST00000638708	SYCP1	Q15431	976 aa		13.47	□□□□□ -0.25
STRADA-231	ENST00000638708	CHAMP1	Q96JM3	812 aa		13.47	□□□□□ -0.25
STRADA-231	ENST00000638708	USP25	Q9UHP3	1055 aa		13.47	□□□□□ -0.25
STRADA-231	ENST00000638708	FANCA	O15360	1455 aa		13.47	□□□□□ -0.25
STRADA-231	ENST00000638708	ABCA9	Q8IUA7	1624 aa		13.47	□□□□□ -0.25
STRADA-231	ENST00000638708	RIOK3	O14730	519 aa	Known RBP	13.47	□□□□□ -0.25
STRADA-231	ENST00000638708	ADCY5	O95622	1261 aa		13.47	□□□□□ -0.25
STRADA-231	ENST00000638708	CASC1	Q6TDU7	716 aa		13.47	□□□□□ -0.25
STRADA-231	ENST00000638708	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.47	□□□□□ -0.25
STRADA-231	ENST00000638708	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.47	□□□□□ -0.25
STRADA-231	ENST00000638708	C1orf115	Q9H7X2	142 aa		13.47	□□□□□ -0.25
STRADA-231	ENST00000638708	ABCC4	O15439	1325 aa		13.46	□□□□□ -0.25
STRADA-231	ENST00000638708	TPM3	P06753	285 aa		13.46	□□□□□ -0.25
STRADA-231	ENST00000638708	CDC42BPG	Q6DT37	1551 aa		13.45	□□□□□ -0.26
STRADA-231	ENST00000638708	KLHL34	Q8N239	644 aa		13.45	□□□□□ -0.26
STRADA-231	ENST00000638708	SLC12A5	Q9H2X9	1139 aa		13.45	□□□□□ -0.26
STRADA-231	ENST00000638708	CGN	Q9P2M7	1197 aa	Known RBP	13.45	□□□□□ -0.26
STRADA-231	ENST00000638708	ADGRF5	Q8IZF2	1346 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms