RNA–Protein interactions for RNA: ENST00000638149.1

GABRB3-226, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-226ENST00000638149 CDCA7Q9BWT1 371 aaPredicted RBP6.69□□□□□ -1.34
GABRB3-226ENST00000638149 PPIP5K1Q6PFW1 1433 aa6.68□□□□□ -1.34
GABRB3-226ENST00000638149 MARCH10Q8NA82 808 aaPredicted RBP6.68□□□□□ -1.34
GABRB3-226ENST00000638149 ZNF526Q8TF50 670 aaPredicted RBP6.68□□□□□ -1.34
GABRB3-226ENST00000638149 CABP2Q9NPB3 220 aa6.68□□□□□ -1.34
GABRB3-226ENST00000638149 CPDO75976 1380 aa6.68□□□□□ -1.34
GABRB3-226ENST00000638149 PARP4Q9UKK3 1724 aaKnown RBP6.67□□□□□ -1.34
GABRB3-226ENST00000638149 PROM2Q8N271 834 aa6.67□□□□□ -1.34
GABRB3-226ENST00000638149 SYTL4Q96C24 671 aaPredicted RBP6.67□□□□□ -1.34
GABRB3-226ENST00000638149 LRRC37A3O60309 1634 aa6.67□□□□□ -1.34
GABRB3-226ENST00000638149 WDR17Q8IZU2 1322 aa6.67□□□□□ -1.34
GABRB3-226ENST00000638149 CASZ1Q86V15 1759 aa6.67□□□□□ -1.34
GABRB3-226ENST00000638149 ADGRB1O14514 1584 aa6.66□□□□□ -1.34
GABRB3-226ENST00000638149 PLEKHG3A1L390 1219 aa6.66□□□□□ -1.34
GABRB3-226ENST00000638149 KCNH5Q8NCM2 988 aa6.66□□□□□ -1.34
GABRB3-226ENST00000638149 NLRP2Q9NX02 1062 aa6.66□□□□□ -1.34
GABRB3-226ENST00000638149 TFCP2L1Q9NZI6 479 aa6.66□□□□□ -1.34
GABRB3-226ENST00000638149 CABP1Q9NZU7 370 aa6.66□□□□□ -1.34
GABRB3-226ENST00000638149 USP19O94966 1318 aa6.66□□□□□ -1.34
GABRB3-226ENST00000638149 AKAP12Q02952 1782 aa6.66□□□□□ -1.34
GABRB3-226ENST00000638149 POLR3AO14802 1390 aaPredicted RBP6.66□□□□□ -1.34
GABRB3-226ENST00000638149 CHD4Q14839 1912 aa6.66□□□□□ -1.34
GABRB3-226ENST00000638149 LMO7Q8WWI1 1683 aa6.65□□□□□ -1.34
GABRB3-226ENST00000638149 RGPD3A6NKT7 1758 aaPredicted RBP6.65□□□□□ -1.34
GABRB3-226ENST00000638149 RGPD4Q7Z3J3 1758 aa6.65□□□□□ -1.34
GABRB3-226ENST00000638149 GRIN3BO60391 1043 aa6.65□□□□□ -1.34
GABRB3-226ENST00000638149 GPBP1L1Q9HC44 474 aaPredicted RBP6.65□□□□□ -1.34
GABRB3-226ENST00000638149 BRD4O60885 1362 aaPredicted RBP6.65□□□□□ -1.35
GABRB3-226ENST00000638149 AATKQ6ZMQ8 1374 aa6.65□□□□□ -1.35
GABRB3-226ENST00000638149 ARHGEF28Q8N1W1 1705 aaKnown RBP6.64□□□□□ -1.35
GABRB3-226ENST00000638149 DDX54Q8TDD1 881 aaKnown RBP6.64□□□□□ -1.35
GABRB3-226ENST00000638149 STAC3Q96MF2 364 aa6.64□□□□□ -1.35
GABRB3-226ENST00000638149 CARD10Q9BWT7 1032 aa6.64□□□□□ -1.35
GABRB3-226ENST00000638149 AXIN2Q9Y2T1 843 aa6.64□□□□□ -1.35
GABRB3-226ENST00000638149 CENPJQ9HC77 1338 aaPredicted RBP6.64□□□□□ -1.35
GABRB3-226ENST00000638149 SBF2Q86WG5 1849 aa6.64□□□□□ -1.35
GABRB3-226ENST00000638149 ZNF827Q17R98 1081 aa6.63□□□□□ -1.35
GABRB3-226ENST00000638149 TOPAZ1Q8N9V7 1692 aa6.63□□□□□ -1.35
GABRB3-226ENST00000638149 NLGN2Q8NFZ4 835 aa6.63□□□□□ -1.35
GABRB3-226ENST00000638149 CCDC7Q96M83 1385 aa6.63□□□□□ -1.35
GABRB3-226ENST00000638149 PEAK1Q9H792 1746 aa6.63□□□□□ -1.35
GABRB3-226ENST00000638149 WWC3Q9ULE0 1092 aa6.63□□□□□ -1.35
GABRB3-226ENST00000638149 USP6P35125 1406 aa6.62□□□□□ -1.35
GABRB3-226ENST00000638149 CPSF1Q10570 1443 aaKnown RBP6.62□□□□□ -1.35
GABRB3-226ENST00000638149 RAB3GAP2Q9H2M9 1393 aa6.62□□□□□ -1.35
GABRB3-226ENST00000638149 CAPN15O75808 1086 aa6.62□□□□□ -1.35
GABRB3-226ENST00000638149 IL2RBP14784 551 aa6.62□□□□□ -1.35
GABRB3-226ENST00000638149 MSL1Q68DK7 614 aa6.62□□□□□ -1.35
GABRB3-226ENST00000638149 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.62□□□□□ -1.35
GABRB3-226ENST00000638149 SLC16A10Q8TF71 515 aa6.62□□□□□ -1.35
GABRB3-226ENST00000638149 LTV1Q96GA3 475 aaPredicted RBP6.62□□□□□ -1.35
GABRB3-226ENST00000638149 TNS2Q63HR2 1409 aa6.61□□□□□ -1.35
GABRB3-226ENST00000638149 UTRNP46939 3433 aa6.61□□□□□ -1.35
GABRB3-226ENST00000638149 EVC2Q86UK5 1308 aa6.61□□□□□ -1.35
GABRB3-226ENST00000638149 KCNQ4P56696 695 aa6.61□□□□□ -1.35
GABRB3-226ENST00000638149 NBPF1Q3BBV0 1214 aa6.61□□□□□ -1.35
GABRB3-226ENST00000638149 ARHGEF25Q86VW2 580 aa6.61□□□□□ -1.35
GABRB3-226ENST00000638149 SGIP1Q9BQI5 828 aa6.61□□□□□ -1.35
GABRB3-226ENST00000638149 KAT6BQ8WYB5 2073 aa6.61□□□□□ -1.35
GABRB3-226ENST00000638149 ATP10DQ9P241 1426 aa6.6□□□□□ -1.35
GABRB3-226ENST00000638149 MAP3K5Q99683 1374 aa6.6□□□□□ -1.35
GABRB3-226ENST00000638149 WNK3Q9BYP7 1800 aa6.6□□□□□ -1.35
GABRB3-226ENST00000638149 TTC21BQ7Z4L5 1316 aa6.6□□□□□ -1.35
GABRB3-226ENST00000638149 HSPA6P17066 643 aa6.6□□□□□ -1.35
GABRB3-226ENST00000638149 SLC27A3Q5K4L6 730 aa6.6□□□□□ -1.35
GABRB3-226ENST00000638149 TMC1Q8TDI8 760 aa6.6□□□□□ -1.35
GABRB3-226ENST00000638149 ANKRD24Q8TF21 1146 aa6.6□□□□□ -1.35
GABRB3-226ENST00000638149 ZNF692Q9BU19 519 aaPredicted RBP6.6□□□□□ -1.35
GABRB3-226ENST00000638149 CCNL1Q9UK58 526 aaPredicted RBP6.6□□□□□ -1.35
GABRB3-226ENST00000638149 SLIT3O75094 1523 aa6.6□□□□□ -1.35
GABRB3-226ENST00000638149 KTN1Q86UP2 1357 aaKnown RBP6.59□□□□□ -1.35
GABRB3-226ENST00000638149 NHSQ6T4R5 1651 aa6.59□□□□□ -1.35
GABRB3-226ENST00000638149 QRICH2Q9H0J4 1663 aa6.59□□□□□ -1.35
GABRB3-226ENST00000638149 PNPLA7Q6ZV29 1317 aa6.59□□□□□ -1.35
GABRB3-226ENST00000638149 YBX3P16989 372 aaKnown RBP eCLIP6.59□□□□□ -1.35
GABRB3-226ENST00000638149 LRRC4BQ9NT99 713 aa6.59□□□□□ -1.35
GABRB3-226ENST00000638149 RGPD5Q99666 1765 aa6.59□□□□□ -1.35
GABRB3-226ENST00000638149 BCL9O00512 1426 aa6.59□□□□□ -1.36
GABRB3-226ENST00000638149 TTC21AQ8NDW8 1320 aa6.58□□□□□ -1.36
GABRB3-226ENST00000638149 PRIM1P49642 420 aaKnown RBP6.58□□□□□ -1.36
GABRB3-226ENST00000638149 AKT1S1Q96B36 256 aa6.58□□□□□ -1.36
GABRB3-226ENST00000638149 PIK3C2AO00443 1686 aa6.58□□□□□ -1.36
GABRB3-226ENST00000638149 USP47Q96K76 1375 aa6.57□□□□□ -1.36
GABRB3-226ENST00000638149 BTAF1O14981 1849 aa6.57□□□□□ -1.36
GABRB3-226ENST00000638149 SHANK3Q9BYB0 1731 aa6.57□□□□□ -1.36
GABRB3-226ENST00000638149 HDGFL2Q7Z4V5 671 aaPredicted RBP6.57□□□□□ -1.36
GABRB3-226ENST00000638149 C16orf71Q8IYS4 520 aaPredicted RBP6.57□□□□□ -1.36
GABRB3-226ENST00000638149 ABCC6O95255 1503 aa6.56□□□□□ -1.36
GABRB3-226ENST00000638149 ERBB3P21860 1342 aa6.56□□□□□ -1.36
GABRB3-226ENST00000638149 PHF14O94880 888 aa6.56□□□□□ -1.36
GABRB3-226ENST00000638149 NME9Q86XW9 330 aa6.56□□□□□ -1.36
GABRB3-226ENST00000638149 COL23A1Q86Y22 540 aaPredicted RBP6.56□□□□□ -1.36
GABRB3-226ENST00000638149 AK7Q96M32 723 aa6.56□□□□□ -1.36
GABRB3-226ENST00000638149 COL18A1P39060 1754 aa6.56□□□□□ -1.36
GABRB3-226ENST00000638149 TRPM1Q7Z4N2 1603 aa6.55□□□□□ -1.36
GABRB3-226ENST00000638149 AMPHP49418 695 aa6.55□□□□□ -1.36
GABRB3-226ENST00000638149 APLP1P51693 650 aa6.55□□□□□ -1.36
GABRB3-226ENST00000638149 CD2APQ9Y5K6 639 aa6.55□□□□□ -1.36
GABRB3-226ENST00000638149 ROCK2O75116 1388 aaKnown RBP6.55□□□□□ -1.36
GABRB3-226ENST00000638149 PAPPAQ13219 1627 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms