RNA–Protein interactions for RNA: ENST00000638063.1

AMT-256, Transcript of aminomethyltransferase, human

TSL 5 BASIC

Gene AMT, Length 1,783 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AMT-256	ENST00000638063	IP6K1	Q92551	441 aa		18.97	■□□□□ 0.63
AMT-256	ENST00000638063	COL18A1	P39060	1754 aa		18.95	■□□□□ 0.62
AMT-256	ENST00000638063	IL13	P35225	146 aa		18.95	■□□□□ 0.62
AMT-256	ENST00000638063	CABLES1	Q8TDN4	633 aa		18.95	■□□□□ 0.62
AMT-256	ENST00000638063	HSP90AB2P	Q58FF8	381 aa		18.94	■□□□□ 0.62
AMT-256	ENST00000638063	RGPD1	P0DJD0	1748 aa		18.94	■□□□□ 0.62
AMT-256	ENST00000638063	JCAD	Q9P266	1359 aa		18.94	■□□□□ 0.62
AMT-256	ENST00000638063	HAP1	P54257	671 aa	Predicted RBP	18.93	■□□□□ 0.62
AMT-256	ENST00000638063	ADAMTS8	Q9UP79	889 aa		18.93	■□□□□ 0.62
AMT-256	ENST00000638063	KIAA0232	Q92628	1395 aa		18.92	■□□□□ 0.62
AMT-256	ENST00000638063	ZC3H6	P61129	1189 aa	Known RBP	18.92	■□□□□ 0.62
AMT-256	ENST00000638063	EIF4A2	Q14240	407 aa	Known RBP	18.92	■□□□□ 0.62
AMT-256	ENST00000638063	LMO7	Q8WWI1	1683 aa		18.91	■□□□□ 0.62
AMT-256	ENST00000638063	FAM208A	Q9UK61	1670 aa	Known RBP	18.9	■□□□□ 0.62
AMT-256	ENST00000638063	PLEKHG5	O94827	1062 aa		18.9	■□□□□ 0.62
AMT-256	ENST00000638063	U2AF1L5	P0DN76	240 aa	Predicted RBP	18.9	■□□□□ 0.62
AMT-256	ENST00000638063	U2AF1	Q01081	240 aa	Known RBP eCLIP	18.9	■□□□□ 0.62
AMT-256	ENST00000638063	PNN	Q9H307	717 aa	Known RBP	18.9	■□□□□ 0.62
AMT-256	ENST00000638063	RGPD5	Q99666	1765 aa		18.89	■□□□□ 0.62
AMT-256	ENST00000638063	COL14A1	Q05707	1796 aa	Known RBP	18.89	■□□□□ 0.61
AMT-256	ENST00000638063	U2SURP	O15042	1029 aa	Known RBP	18.88	■□□□□ 0.61
AMT-256	ENST00000638063	PRDM11	Q9NQV5	511 aa		18.88	■□□□□ 0.61
AMT-256	ENST00000638063	FCHSD2	O94868	740 aa		18.88	■□□□□ 0.61
AMT-256	ENST00000638063	SPATA31A6	Q5VVP1	1343 aa		18.88	■□□□□ 0.61
AMT-256	ENST00000638063	ERBB3	P21860	1342 aa		18.87	■□□□□ 0.61
AMT-256	ENST00000638063	IGSF1	Q8N6C5	1336 aa		18.87	■□□□□ 0.61
AMT-256	ENST00000638063	CAMTA1	Q9Y6Y1	1673 aa		18.87	■□□□□ 0.61
AMT-256	ENST00000638063	KDR	P35968	1356 aa		18.86	■□□□□ 0.61
AMT-256	ENST00000638063	ZBTB7C	A1YPR0	619 aa		18.86	■□□□□ 0.61
AMT-256	ENST00000638063	PHF23	Q9BUL5	403 aa	Predicted RBP	18.86	■□□□□ 0.61
AMT-256	ENST00000638063	AXIN2	Q9Y2T1	843 aa		18.86	■□□□□ 0.61
AMT-256	ENST00000638063	NCAPD2	Q15021	1401 aa		18.84	■□□□□ 0.61
AMT-256	ENST00000638063	RUNDC1	Q96C34	613 aa		18.84	■□□□□ 0.61
AMT-256	ENST00000638063	NGEF	Q8N5V2	710 aa		18.83	■□□□□ 0.61
AMT-256	ENST00000638063	ANKRD24	Q8TF21	1146 aa		18.83	■□□□□ 0.61
AMT-256	ENST00000638063	RSPH6A	Q9H0K4	717 aa		18.83	■□□□□ 0.61
AMT-256	ENST00000638063	CHRNA2	Q15822	529 aa		18.83	■□□□□ 0.6
AMT-256	ENST00000638063	EYA1	Q99502	592 aa		18.83	■□□□□ 0.6
AMT-256	ENST00000638063	COL5A2	P05997	1499 aa	Predicted RBP	18.83	■□□□□ 0.6
AMT-256	ENST00000638063	FAM83G	A6ND36	823 aa		18.82	■□□□□ 0.6
AMT-256	ENST00000638063	HNRNPU	Q00839	825 aa	Known RBP eCLIP	18.82	■□□□□ 0.6
AMT-256	ENST00000638063	YTHDC1	Q96MU7	727 aa	Known RBP	18.82	■□□□□ 0.6
AMT-256	ENST00000638063	PLEKHF1	Q96S99	279 aa		18.82	■□□□□ 0.6
AMT-256	ENST00000638063	NCBP3	Q53F19	620 aa	Known RBP	18.81	■□□□□ 0.6
AMT-256	ENST00000638063	RGPD2	P0DJD1	1756 aa		18.81	■□□□□ 0.6
AMT-256	ENST00000638063	NWD2	Q9ULI1	1742 aa		18.81	■□□□□ 0.6
AMT-256	ENST00000638063	NEFM	P07197	916 aa		18.81	■□□□□ 0.6
AMT-256	ENST00000638063	SULT6B1	Q6IMI4	303 aa		18.81	■□□□□ 0.6
AMT-256	ENST00000638063	LTV1	Q96GA3	475 aa	Predicted RBP	18.81	■□□□□ 0.6
AMT-256	ENST00000638063	PLCH1	Q4KWH8	1693 aa		18.8	■□□□□ 0.6
AMT-256	ENST00000638063	PLEKHG2	Q9H7P9	1386 aa		18.8	■□□□□ 0.6
AMT-256	ENST00000638063	ZBED9	Q6R2W3	1325 aa		18.79	■□□□□ 0.6
AMT-256	ENST00000638063	WDR17	Q8IZU2	1322 aa		18.79	■□□□□ 0.6
AMT-256	ENST00000638063	MAPK8IP3	Q9UPT6	1336 aa		18.79	■□□□□ 0.6
AMT-256	ENST00000638063	HMOX1	P09601	288 aa		18.79	■□□□□ 0.6
AMT-256	ENST00000638063	PRKAR2B	P31323	418 aa		18.78	■□□□□ 0.6
AMT-256	ENST00000638063	NBPF6	Q5VWK0	638 aa		18.78	■□□□□ 0.6
AMT-256	ENST00000638063	CCDC146	Q8IYE0	955 aa		18.78	■□□□□ 0.6
AMT-256	ENST00000638063	NBPF4	Q96M43	638 aa		18.78	■□□□□ 0.6
AMT-256	ENST00000638063	NRAP	Q86VF7	1730 aa		18.76	■□□□□ 0.59
AMT-256	ENST00000638063	AEBP1	Q8IUX7	1158 aa		18.76	■□□□□ 0.59
AMT-256	ENST00000638063	SLIT2	O94813	1529 aa		18.76	■□□□□ 0.59
AMT-256	ENST00000638063	NUTM2B	A6NNL0	878 aa	Predicted RBP	18.76	■□□□□ 0.59
AMT-256	ENST00000638063	NUTM2E	B1AL46	878 aa	Predicted RBP	18.76	■□□□□ 0.59
AMT-256	ENST00000638063	APAF1	O14727	1248 aa		18.76	■□□□□ 0.59
AMT-256	ENST00000638063	CSB-PGBD3	P0DP91	1061 aa		18.76	■□□□□ 0.59
AMT-256	ENST00000638063	NUTM2A	Q8IVF1	878 aa	Predicted RBP	18.76	■□□□□ 0.59
AMT-256	ENST00000638063	TCP11L2	Q8N4U5	519 aa		18.76	■□□□□ 0.59
AMT-256	ENST00000638063	BTG4	Q9NY30	223 aa		18.76	■□□□□ 0.59
AMT-256	ENST00000638063	ADAMTS2	O95450	1211 aa		18.75	■□□□□ 0.59
AMT-256	ENST00000638063	LRP6	O75581	1613 aa		18.75	■□□□□ 0.59
AMT-256	ENST00000638063	CRB1	P82279	1406 aa		18.74	■□□□□ 0.59
AMT-256	ENST00000638063	EVA1C	P58658	441 aa		18.73	■□□□□ 0.59
AMT-256	ENST00000638063	NLRP2	Q9NX02	1062 aa		18.73	■□□□□ 0.59
AMT-256	ENST00000638063	CCDC27	Q2M243	656 aa		18.73	■□□□□ 0.59
AMT-256	ENST00000638063	CARD10	Q9BWT7	1032 aa		18.73	■□□□□ 0.59
AMT-256	ENST00000638063	RGS17	Q9UGC6	210 aa	Predicted RBP	18.72	■□□□□ 0.59
AMT-256	ENST00000638063	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	18.72	■□□□□ 0.59
AMT-256	ENST00000638063	TMPO	P42166	694 aa	Known RBP	18.71	■□□□□ 0.59
AMT-256	ENST00000638063	TOM1L2	Q6ZVM7	507 aa		18.71	■□□□□ 0.59
AMT-256	ENST00000638063	PHACTR3	Q96KR7	559 aa		18.71	■□□□□ 0.59
AMT-256	ENST00000638063	PARP4	Q9UKK3	1724 aa	Known RBP	18.7	■□□□□ 0.58
AMT-256	ENST00000638063	NFE2L2	Q16236	605 aa		18.7	■□□□□ 0.58
AMT-256	ENST00000638063	FNBP4	Q8N3X1	1017 aa	Predicted RBP	18.7	■□□□□ 0.58
AMT-256	ENST00000638063	USHBP1	Q8N6Y0	703 aa		18.7	■□□□□ 0.58
AMT-256	ENST00000638063	GAS2L2	Q8NHY3	880 aa		18.7	■□□□□ 0.58
AMT-256	ENST00000638063	STRN4	Q9NRL3	753 aa		18.7	■□□□□ 0.58
AMT-256	ENST00000638063	DLG5	Q8TDM6	1919 aa		18.7	■□□□□ 0.58
AMT-256	ENST00000638063	LARP1	Q6PKG0	1096 aa	Known RBP	18.69	■□□□□ 0.58
AMT-256	ENST00000638063	ZNF521	Q96K83	1311 aa		18.69	■□□□□ 0.58
AMT-256	ENST00000638063	PDE3B	Q13370	1112 aa		18.68	■□□□□ 0.58
AMT-256	ENST00000638063	AMOT	Q4VCS5	1084 aa		18.68	■□□□□ 0.58
AMT-256	ENST00000638063	RAPGEF4	Q8WZA2	1011 aa		18.68	■□□□□ 0.58
AMT-256	ENST00000638063	LMOD3	Q0VAK6	560 aa		18.68	■□□□□ 0.58
AMT-256	ENST00000638063	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	18.68	■□□□□ 0.58
AMT-256	ENST00000638063	PKD1L3	Q7Z443	1732 aa		18.67	■□□□□ 0.58
AMT-256	ENST00000638063	NGLY1	Q96IV0	654 aa		18.67	■□□□□ 0.58
AMT-256	ENST00000638063	C8orf37	Q96NL8	207 aa		18.67	■□□□□ 0.58
AMT-256	ENST00000638063	BCL9L	Q86UU0	1499 aa		18.66	■□□□□ 0.58
AMT-256	ENST00000638063	RIPK4	P57078	832 aa		18.66	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms