RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	RGPD4	Q7Z3J3	1758 aa		13.53	□□□□□ -0.24
CACNA1A-256	ENST00000637981	TOM1L2	Q6ZVM7	507 aa		13.53	□□□□□ -0.24
CACNA1A-256	ENST00000637981	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.53	□□□□□ -0.24
CACNA1A-256	ENST00000637981	QRICH2	Q9H0J4	1663 aa		13.53	□□□□□ -0.24
CACNA1A-256	ENST00000637981	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.53	□□□□□ -0.24
CACNA1A-256	ENST00000637981	AATK	Q6ZMQ8	1374 aa		13.53	□□□□□ -0.24
CACNA1A-256	ENST00000637981	SBF2	Q86WG5	1849 aa		13.53	□□□□□ -0.24
CACNA1A-256	ENST00000637981	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.52	□□□□□ -0.25
CACNA1A-256	ENST00000637981	USP6	P35125	1406 aa		13.52	□□□□□ -0.25
CACNA1A-256	ENST00000637981	SLIT3	O75094	1523 aa		13.52	□□□□□ -0.25
CACNA1A-256	ENST00000637981	PTF1A	Q7RTS3	328 aa		13.51	□□□□□ -0.25
CACNA1A-256	ENST00000637981	CABP1	Q9NZU7	370 aa		13.51	□□□□□ -0.25
CACNA1A-256	ENST00000637981	NEUROD1	Q13562	356 aa		13.5	□□□□□ -0.25
CACNA1A-256	ENST00000637981	CASZ1	Q86V15	1759 aa		13.5	□□□□□ -0.25
CACNA1A-256	ENST00000637981	WDR17	Q8IZU2	1322 aa		13.49	□□□□□ -0.25
CACNA1A-256	ENST00000637981	MARCH10	Q8NA82	808 aa	Predicted RBP	13.49	□□□□□ -0.25
CACNA1A-256	ENST00000637981	SIN3A	Q96ST3	1273 aa		13.49	□□□□□ -0.25
CACNA1A-256	ENST00000637981	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.49	□□□□□ -0.25
CACNA1A-256	ENST00000637981	AXIN2	Q9Y2T1	843 aa		13.49	□□□□□ -0.25
CACNA1A-256	ENST00000637981	WNK3	Q9BYP7	1800 aa		13.49	□□□□□ -0.25
CACNA1A-256	ENST00000637981	COL18A1	P39060	1754 aa		13.49	□□□□□ -0.25
CACNA1A-256	ENST00000637981	PIK3C2A	O00443	1686 aa		13.48	□□□□□ -0.25
CACNA1A-256	ENST00000637981	ZBTB7A	O95365	584 aa		13.48	□□□□□ -0.25
CACNA1A-256	ENST00000637981	PROM2	Q8N271	834 aa		13.48	□□□□□ -0.25
CACNA1A-256	ENST00000637981	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.47	□□□□□ -0.25
CACNA1A-256	ENST00000637981	TIMELESS	Q9UNS1	1208 aa		13.47	□□□□□ -0.25
CACNA1A-256	ENST00000637981	AKAP12	Q02952	1782 aa		13.47	□□□□□ -0.25
CACNA1A-256	ENST00000637981	BCL9	O00512	1426 aa		13.47	□□□□□ -0.25
CACNA1A-256	ENST00000637981	CPSF1	Q10570	1443 aa	Known RBP	13.47	□□□□□ -0.25
CACNA1A-256	ENST00000637981	TONSL	Q96HA7	1378 aa		13.46	□□□□□ -0.25
CACNA1A-256	ENST00000637981	MYOM1	P52179	1685 aa		13.46	□□□□□ -0.26
CACNA1A-256	ENST00000637981	SOX12	O15370	315 aa		13.45	□□□□□ -0.26
CACNA1A-256	ENST00000637981	CSB-PGBD3	P0DP91	1061 aa		13.45	□□□□□ -0.26
CACNA1A-256	ENST00000637981	PTGER2	P43116	358 aa		13.45	□□□□□ -0.26
CACNA1A-256	ENST00000637981	ARHGEF25	Q86VW2	580 aa		13.45	□□□□□ -0.26
CACNA1A-256	ENST00000637981	CARD10	Q9BWT7	1032 aa		13.45	□□□□□ -0.26
CACNA1A-256	ENST00000637981	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.45	□□□□□ -0.26
CACNA1A-256	ENST00000637981	EVC2	Q86UK5	1308 aa		13.44	□□□□□ -0.26
CACNA1A-256	ENST00000637981	RGPD5	Q99666	1765 aa		13.44	□□□□□ -0.26
CACNA1A-256	ENST00000637981	TXNRD1	Q16881	649 aa		13.44	□□□□□ -0.26
CACNA1A-256	ENST00000637981	KCNH5	Q8NCM2	988 aa		13.44	□□□□□ -0.26
CACNA1A-256	ENST00000637981	STK32B	Q9NY57	414 aa		13.44	□□□□□ -0.26
CACNA1A-256	ENST00000637981	TTC21B	Q7Z4L5	1316 aa		13.44	□□□□□ -0.26
CACNA1A-256	ENST00000637981	EXOC5	O00471	708 aa		13.43	□□□□□ -0.26
CACNA1A-256	ENST00000637981	SLC15A2	Q16348	729 aa		13.43	□□□□□ -0.26
CACNA1A-256	ENST00000637981	ZNF692	Q9BU19	519 aa	Predicted RBP	13.43	□□□□□ -0.26
CACNA1A-256	ENST00000637981	L3MBTL2	Q969R5	705 aa		13.42	□□□□□ -0.26
CACNA1A-256	ENST00000637981	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.41	□□□□□ -0.26
CACNA1A-256	ENST00000637981	SYT17	Q9BSW7	474 aa		13.41	□□□□□ -0.26
CACNA1A-256	ENST00000637981	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.41	□□□□□ -0.26
CACNA1A-256	ENST00000637981	CCDC7	Q96M83	1385 aa		13.41	□□□□□ -0.26
CACNA1A-256	ENST00000637981	TTC21A	Q8NDW8	1320 aa		13.41	□□□□□ -0.26
CACNA1A-256	ENST00000637981	TNS2	Q63HR2	1409 aa		13.41	□□□□□ -0.26
CACNA1A-256	ENST00000637981	MTFR1L	Q9H019	292 aa		13.4	□□□□□ -0.26
CACNA1A-256	ENST00000637981	NFAT5	O94916	1531 aa		13.4	□□□□□ -0.26
CACNA1A-256	ENST00000637981	ACSBG1	Q96GR2	724 aa		13.39	□□□□□ -0.27
CACNA1A-256	ENST00000637981	KTN1	Q86UP2	1357 aa	Known RBP	13.38	□□□□□ -0.27
CACNA1A-256	ENST00000637981	NHS	Q6T4R5	1651 aa		13.38	□□□□□ -0.27
CACNA1A-256	ENST00000637981	ABCC6	O95255	1503 aa		13.38	□□□□□ -0.27
CACNA1A-256	ENST00000637981	SGIP1	Q9BQI5	828 aa		13.38	□□□□□ -0.27
CACNA1A-256	ENST00000637981	ROCK2	O75116	1388 aa	Known RBP	13.37	□□□□□ -0.27
CACNA1A-256	ENST00000637981	UTRN	P46939	3433 aa		13.37	□□□□□ -0.27
CACNA1A-256	ENST00000637981	MON2	Q7Z3U7	1717 aa		13.36	□□□□□ -0.27
CACNA1A-256	ENST00000637981	ERBB3	P21860	1342 aa		13.36	□□□□□ -0.27
CACNA1A-256	ENST00000637981	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
CACNA1A-256	ENST00000637981	ARX	Q96QS3	562 aa		13.36	□□□□□ -0.27
CACNA1A-256	ENST00000637981	NLRP2	Q9NX02	1062 aa		13.36	□□□□□ -0.27
CACNA1A-256	ENST00000637981	USP54	Q70EL1	1684 aa		13.35	□□□□□ -0.27
CACNA1A-256	ENST00000637981	PAPPA	Q13219	1627 aa		13.35	□□□□□ -0.27
CACNA1A-256	ENST00000637981	IL2RB	P14784	551 aa		13.35	□□□□□ -0.27
CACNA1A-256	ENST00000637981	CHD4	Q14839	1912 aa		13.33	□□□□□ -0.28
CACNA1A-256	ENST00000637981	BTAF1	O14981	1849 aa		13.33	□□□□□ -0.28
CACNA1A-256	ENST00000637981	USP31	Q70CQ4	1352 aa		13.33	□□□□□ -0.28
CACNA1A-256	ENST00000637981	ZNF827	Q17R98	1081 aa		13.33	□□□□□ -0.28
CACNA1A-256	ENST00000637981	RNF39	Q9H2S5	420 aa		13.33	□□□□□ -0.28
CACNA1A-256	ENST00000637981	MAP3K5	Q99683	1374 aa		13.32	□□□□□ -0.28
CACNA1A-256	ENST00000637981	SBNO2	Q9Y2G9	1366 aa		13.32	□□□□□ -0.28
CACNA1A-256	ENST00000637981	LTN1	O94822	1766 aa		13.32	□□□□□ -0.28
CACNA1A-256	ENST00000637981	SENP3-EIF4A1	A0A087X0R7	540 aa		13.32	□□□□□ -0.28
CACNA1A-256	ENST00000637981	NME9	Q86XW9	330 aa		13.32	□□□□□ -0.28
CACNA1A-256	ENST00000637981	ANKRD24	Q8TF21	1146 aa		13.32	□□□□□ -0.28
CACNA1A-256	ENST00000637981	LRRC4B	Q9NT99	713 aa		13.32	□□□□□ -0.28
CACNA1A-256	ENST00000637981	C1QTNF8	P60827	252 aa		13.31	□□□□□ -0.28
CACNA1A-256	ENST00000637981	GPR162	Q16538	588 aa		13.31	□□□□□ -0.28
CACNA1A-256	ENST00000637981	KLHL34	Q8N239	644 aa		13.3	□□□□□ -0.28
CACNA1A-256	ENST00000637981	CD163L1	Q9NR16	1453 aa		13.29	□□□□□ -0.28
CACNA1A-256	ENST00000637981	TMC1	Q8TDI8	760 aa		13.29	□□□□□ -0.28
CACNA1A-256	ENST00000637981	ZEB1	P37275	1124 aa	Predicted RBP	13.28	□□□□□ -0.28
CACNA1A-256	ENST00000637981	SLC27A3	Q5K4L6	730 aa		13.28	□□□□□ -0.28
CACNA1A-256	ENST00000637981	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.28	□□□□□ -0.28
CACNA1A-256	ENST00000637981	DDX54	Q8TDD1	881 aa	Known RBP	13.28	□□□□□ -0.28
CACNA1A-256	ENST00000637981	SLC16A10	Q8TF71	515 aa		13.28	□□□□□ -0.28
CACNA1A-256	ENST00000637981	AKT1S1	Q96B36	256 aa		13.28	□□□□□ -0.28
CACNA1A-256	ENST00000637981	KAT6B	Q8WYB5	2073 aa		13.27	□□□□□ -0.28
CACNA1A-256	ENST00000637981	POLD1	P28340	1107 aa		13.27	□□□□□ -0.29
CACNA1A-256	ENST00000637981	EDC4	Q6P2E9	1401 aa	Known RBP	13.27	□□□□□ -0.29
CACNA1A-256	ENST00000637981	HOXD11	P31277	338 aa	Predicted RBP	13.26	□□□□□ -0.29
CACNA1A-256	ENST00000637981	PELP1	Q8IZL8	1130 aa	Known RBP	13.26	□□□□□ -0.29
CACNA1A-256	ENST00000637981	SLC12A5	Q9H2X9	1139 aa		13.26	□□□□□ -0.29
CACNA1A-256	ENST00000637981	TFCP2L1	Q9NZI6	479 aa		13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms