RNA–Protein interactions for RNA: ENST00000637911.1

SYNGAP1-225, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 157 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-225ENST00000637911 CBLBQ13191 982 aa0.32□□□□□ -2.36
SYNGAP1-225ENST00000637911 GAS6Q14393 721 aa0.32□□□□□ -2.36
SYNGAP1-225ENST00000637911 SLC51AQ86UW1 340 aa0.32□□□□□ -2.36
SYNGAP1-225ENST00000637911 ZNF575Q86XF7 245 aa0.32□□□□□ -2.36
SYNGAP1-225ENST00000637911 PLCD3Q8N3E9 789 aa0.32□□□□□ -2.36
SYNGAP1-225ENST00000637911 EFCAB3Q8N7B9 438 aa0.32□□□□□ -2.36
SYNGAP1-225ENST00000637911 BHLHE22Q8NFJ8 381 aaPredicted RBP0.32□□□□□ -2.36
SYNGAP1-225ENST00000637911 FAM84AQ96KN4 292 aa0.32□□□□□ -2.36
SYNGAP1-225ENST00000637911 C20orf173Q96LM9 149 aa0.32□□□□□ -2.36
SYNGAP1-225ENST00000637911 OXCT2Q9BYC2 517 aaPredicted RBP0.32□□□□□ -2.36
SYNGAP1-225ENST00000637911 DNMT3LQ9UJW3 386 aa0.32□□□□□ -2.36
SYNGAP1-225ENST00000637911 FCF1Q9Y324 198 aaKnown RBP0.32□□□□□ -2.36
SYNGAP1-225ENST00000637911 IRS2Q9Y4H2 1338 aa0.32□□□□□ -2.36
SYNGAP1-225ENST00000637911 TTLL8A6PVC2 850 aa0.31□□□□□ -2.36
SYNGAP1-225ENST00000637911 KIAA1324LA8MWY0 1029 aaPredicted RBP0.31□□□□□ -2.36
SYNGAP1-225ENST00000637911 SHISA8B8ZZ34 492 aa0.31□□□□□ -2.36
SYNGAP1-225ENST00000637911 MX2P20592 715 aa0.31□□□□□ -2.36
SYNGAP1-225ENST00000637911 GDF5P43026 501 aa0.31□□□□□ -2.36
SYNGAP1-225ENST00000637911 NFIXQ14938 502 aa0.31□□□□□ -2.36
SYNGAP1-225ENST00000637911 RC3H1Q5TC82 1133 aaKnown RBP0.31□□□□□ -2.36
SYNGAP1-225ENST00000637911 XKR5Q6UX68 686 aa0.31□□□□□ -2.36
SYNGAP1-225ENST00000637911 GRASPQ7Z6J2 395 aaPredicted RBP0.31□□□□□ -2.36
SYNGAP1-225ENST00000637911 GLCCI1Q86VQ1 547 aa0.31□□□□□ -2.36
SYNGAP1-225ENST00000637911 C1QL4Q86Z23 238 aa0.31□□□□□ -2.36
SYNGAP1-225ENST00000637911 ABI1Q8IZP0 508 aa0.31□□□□□ -2.36
SYNGAP1-225ENST00000637911 SPATA3Q8NHX4 192 aa0.31□□□□□ -2.36
SYNGAP1-225ENST00000637911 EDARADDQ8WWZ3 215 aa0.31□□□□□ -2.36
SYNGAP1-225ENST00000637911 JPH4Q96JJ6 628 aa0.31□□□□□ -2.36
SYNGAP1-225ENST00000637911 FOXD4L1Q9NU39 408 aa0.31□□□□□ -2.36
SYNGAP1-225ENST00000637911 CNTNAP4Q9C0A0 1308 aa0.31□□□□□ -2.36
SYNGAP1-225ENST00000637911 SLC35F4A4IF30 521 aa0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 FIGNL2A6NMB9 653 aa0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 ATP5J2-PTCD1G3V325 749 aa0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 BIN1O00499 593 aa0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 SOX12O15370 315 aa0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 PTCD1O75127 700 aaKnown RBP0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 ADAMTS4O75173 837 aa0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 NR1I2O75469 434 aa0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 MED26O95402 600 aa0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 CAPNS1P04632 268 aa0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 ITGB5P18084 799 aa0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 POU3F3P20264 500 aaPredicted RBP0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 CTGFP29279 349 aa0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 WDR4P57081 412 aaKnown RBP0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 MAP3K9P80192 1104 aa0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 TRIM32Q13049 653 aa0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 TMEM132AQ24JP5 1023 aa0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 SKOR2Q2VWA4 1001 aaPredicted RBP0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 INTS5Q6P9B9 1019 aaKnown RBP0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 AMIGO3Q86WK7 504 aa0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 SLF2Q8IX21 1173 aa0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 PLVAPQ9BX97 442 aa0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 ZCCHC4Q9H5U6 513 aa0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 PARD6AQ9NPB6 346 aa0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 C11orf21Q9P2W6 132 aa0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 GDF2Q9UK05 429 aaPredicted RBP0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 SOS2Q07890 1332 aaPredicted RBP0.3□□□□□ -2.36
SYNGAP1-225ENST00000637911 SPDYE4A6NLX3 237 aa0.29□□□□□ -2.36
SYNGAP1-225ENST00000637911 ERVV-2B6SEH9 535 aa0.29□□□□□ -2.36
SYNGAP1-225ENST00000637911 PROB1E7EW31 1015 aa0.29□□□□□ -2.36
SYNGAP1-225ENST00000637911 GPR25O00155 361 aa0.29□□□□□ -2.36
SYNGAP1-225ENST00000637911 IKBKBO14920 756 aa0.29□□□□□ -2.36
SYNGAP1-225ENST00000637911 PPFIA2O75334 1257 aa0.29□□□□□ -2.36
SYNGAP1-225ENST00000637911 SKIP12755 728 aa0.29□□□□□ -2.36
SYNGAP1-225ENST00000637911 MAP2K3P46734 347 aa0.29□□□□□ -2.36
SYNGAP1-225ENST00000637911 SPATS1Q496A3 300 aa0.29□□□□□ -2.36
SYNGAP1-225ENST00000637911 EPHA10Q5JZY3 1008 aa0.29□□□□□ -2.36
SYNGAP1-225ENST00000637911 MSL1Q68DK7 614 aa0.29□□□□□ -2.36
SYNGAP1-225ENST00000637911 MPRIPQ6WCQ1 1025 aa0.29□□□□□ -2.36
SYNGAP1-225ENST00000637911 CILP2Q8IUL8 1156 aa0.29□□□□□ -2.36
SYNGAP1-225ENST00000637911 ZFPM1Q8IX07 1006 aa0.29□□□□□ -2.36
SYNGAP1-225ENST00000637911 CXorf38Q8TB03 319 aa0.29□□□□□ -2.36
SYNGAP1-225ENST00000637911 PPP1R16BQ96T49 567 aa0.29□□□□□ -2.36
SYNGAP1-225ENST00000637911 PALD1Q9ULE6 856 aa0.29□□□□□ -2.36
SYNGAP1-225ENST00000637911 ANGEL1Q9UNK9 670 aaKnown RBP0.29□□□□□ -2.36
SYNGAP1-225ENST00000637911 C9orf172C9J069 976 aa0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 KRTAP4-16G5E9R7 235 aaPredicted RBP0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 SMAPO00193 183 aa0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 TSPAN15O95858 294 aa0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 ADH1CP00326 375 aa0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 FSTP19883 344 aa0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 SPINK2P20155 84 aa0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 HRCP23327 699 aa0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 TRIM28Q13263 835 aaKnown RBP0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 SMN1Q16637 294 aaKnown RBP0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 KRTAP27-1Q3LI81 207 aa0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 TIGD5Q53EQ6 642 aa0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 CIAPIN1Q6FI81 312 aa0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 USP51Q70EK9 711 aa0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 TXNRD3Q86VQ6 643 aa0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 PLPP6Q8IY26 295 aa0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 LINC00528Q8N1L1 170 aa0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 GOLGA6L1Q8N7Z2 621 aa0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 EHBP1Q8NDI1 1231 aa0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 MS4A4AQ96JQ5 239 aa0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 BTBD6Q96KE9 485 aa0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 ZSCAN10Q96SZ4 725 aaPredicted RBP0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 SPSB2Q99619 263 aa0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 SCAND2PQ9GZW5 306 aaPredicted RBP0.28□□□□□ -2.36
SYNGAP1-225ENST00000637911 KDM2AQ9Y2K7 1162 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms