RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 NWD2Q9ULI1 1742 aa11.2□□□□□ -0.62
PNKP-226ENST00000636840 PHRF1Q9P1Y6 1649 aaKnown RBP11.2□□□□□ -0.62
PNKP-226ENST00000636840 OVOS2A0A0J9YW53 1432 aa11.19□□□□□ -0.62
PNKP-226ENST00000636840 OVOS2Q6IE36 1432 aa11.19□□□□□ -0.62
PNKP-226ENST00000636840 NSD2O96028 1365 aa11.19□□□□□ -0.62
PNKP-226ENST00000636840 SPATA31A1Q5TZJ5 1347 aa11.19□□□□□ -0.62
PNKP-226ENST00000636840 WDR17Q8IZU2 1322 aa11.19□□□□□ -0.62
PNKP-226ENST00000636840 ABCA3Q99758 1704 aa11.19□□□□□ -0.62
PNKP-226ENST00000636840 PPM1GO15355 546 aaPredicted RBP11.19□□□□□ -0.62
PNKP-226ENST00000636840 CDCA7Q9BWT1 371 aaPredicted RBP11.19□□□□□ -0.62
PNKP-226ENST00000636840 NLRP2Q9NX02 1062 aa11.19□□□□□ -0.62
PNKP-226ENST00000636840 NRKQ7Z2Y5 1582 aa11.19□□□□□ -0.62
PNKP-226ENST00000636840 MAP3K19Q56UN5 1328 aa11.18□□□□□ -0.62
PNKP-226ENST00000636840 HOXC9P31274 260 aa11.18□□□□□ -0.62
PNKP-226ENST00000636840 TNNT2P45379 298 aaPredicted RBP11.18□□□□□ -0.62
PNKP-226ENST00000636840 RRS1Q15050 365 aaKnown RBP11.18□□□□□ -0.62
PNKP-226ENST00000636840 BARGINQ6ZT62 677 aa11.18□□□□□ -0.62
PNKP-226ENST00000636840 ANKRD24Q8TF21 1146 aa11.18□□□□□ -0.62
PNKP-226ENST00000636840 CARD10Q9BWT7 1032 aa11.18□□□□□ -0.62
PNKP-226ENST00000636840 CAMTA1Q9Y6Y1 1673 aa11.17□□□□□ -0.62
PNKP-226ENST00000636840 PER1O15534 1290 aaPredicted RBP11.17□□□□□ -0.62
PNKP-226ENST00000636840 FBLN1P23142 703 aa11.17□□□□□ -0.62
PNKP-226ENST00000636840 PDE3BQ13370 1112 aa11.17□□□□□ -0.62
PNKP-226ENST00000636840 LTV1Q96GA3 475 aaPredicted RBP11.17□□□□□ -0.62
PNKP-226ENST00000636840 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.17□□□□□ -0.62
PNKP-226ENST00000636840 CRYBG1Q9Y4K1 1723 aa11.17□□□□□ -0.62
PNKP-226ENST00000636840 PLCH1Q4KWH8 1693 aa11.17□□□□□ -0.62
PNKP-226ENST00000636840 CRB1P82279 1406 aa11.17□□□□□ -0.62
PNKP-226ENST00000636840 KIF24Q5T7B8 1368 aa11.16□□□□□ -0.62
PNKP-226ENST00000636840 KRT27Q7Z3Y8 459 aa11.16□□□□□ -0.62
PNKP-226ENST00000636840 BLMP54132 1417 aaPredicted RBP11.16□□□□□ -0.62
PNKP-226ENST00000636840 NFAT5O94916 1531 aa11.15□□□□□ -0.62
PNKP-226ENST00000636840 ERBB3P21860 1342 aa11.15□□□□□ -0.62
PNKP-226ENST00000636840 MYOM1P52179 1685 aa11.15□□□□□ -0.62
PNKP-226ENST00000636840 EXOC5O00471 708 aa11.15□□□□□ -0.62
PNKP-226ENST00000636840 AMER1Q5JTC6 1135 aaPredicted RBP11.15□□□□□ -0.62
PNKP-226ENST00000636840 CC2D1BQ5T0F9 858 aaKnown RBP11.15□□□□□ -0.62
PNKP-226ENST00000636840 SMG6Q86US8 1419 aaKnown RBP11.15□□□□□ -0.62
PNKP-226ENST00000636840 RTL1A6NKG5 1358 aa11.15□□□□□ -0.63
PNKP-226ENST00000636840 COL5A2P05997 1499 aaPredicted RBP11.14□□□□□ -0.63
PNKP-226ENST00000636840 CNGB1Q14028 1251 aaPredicted RBP11.14□□□□□ -0.63
PNKP-226ENST00000636840 DDB1Q16531 1140 aa11.14□□□□□ -0.63
PNKP-226ENST00000636840 CCDC125Q86Z20 511 aa11.14□□□□□ -0.63
PNKP-226ENST00000636840 POLKQ9UBT6 870 aa11.14□□□□□ -0.63
PNKP-226ENST00000636840 EMILIN1Q9Y6C2 1016 aa11.14□□□□□ -0.63
PNKP-226ENST00000636840 FLT4P35916 1363 aa11.14□□□□□ -0.63
PNKP-226ENST00000636840 ABCC6O95255 1503 aa11.14□□□□□ -0.63
PNKP-226ENST00000636840 USP54Q70EL1 1684 aa11.14□□□□□ -0.63
PNKP-226ENST00000636840 RGS12O14924 1447 aa11.13□□□□□ -0.63
PNKP-226ENST00000636840 SF3B2Q13435 895 aaKnown RBP11.13□□□□□ -0.63
PNKP-226ENST00000636840 HSP90AB2PQ58FF8 381 aa11.13□□□□□ -0.63
PNKP-226ENST00000636840 INSRP06213 1382 aa11.13□□□□□ -0.63
PNKP-226ENST00000636840 NPC1L1Q9UHC9 1359 aa11.13□□□□□ -0.63
PNKP-226ENST00000636840 KIF20BQ96Q89 1820 aa11.12□□□□□ -0.63
PNKP-226ENST00000636840 IL2RBP14784 551 aa11.12□□□□□ -0.63
PNKP-226ENST00000636840 DDX10Q13206 875 aaKnown RBP11.12□□□□□ -0.63
PNKP-226ENST00000636840 FAM196AQ6ZSG2 479 aa11.12□□□□□ -0.63
PNKP-226ENST00000636840 RAPGEF4Q8WZA2 1011 aa11.12□□□□□ -0.63
PNKP-226ENST00000636840 LMO7Q8WWI1 1683 aa11.11□□□□□ -0.63
PNKP-226ENST00000636840 GLI3P10071 1580 aa11.11□□□□□ -0.63
PNKP-226ENST00000636840 COL18A1P39060 1754 aa11.11□□□□□ -0.63
PNKP-226ENST00000636840 NRAPQ86VF7 1730 aa11.1□□□□□ -0.63
PNKP-226ENST00000636840 ZNF316A6NFI3 1004 aaPredicted RBP11.1□□□□□ -0.63
PNKP-226ENST00000636840 TATP17735 454 aaPredicted RBP11.1□□□□□ -0.63
PNKP-226ENST00000636840 UPF1Q92900 1129 aaKnown RBP eCLIP11.1□□□□□ -0.63
PNKP-226ENST00000636840 LTN1O94822 1766 aa11.09□□□□□ -0.63
PNKP-226ENST00000636840 MTHFSP49914 203 aa11.09□□□□□ -0.63
PNKP-226ENST00000636840 NBPF6Q5VWK0 638 aa11.09□□□□□ -0.63
PNKP-226ENST00000636840 NBPF4Q96M43 638 aa11.09□□□□□ -0.63
PNKP-226ENST00000636840 CFAP53Q96M91 514 aa11.09□□□□□ -0.63
PNKP-226ENST00000636840 MAP2P11137 1827 aaKnown RBP11.08□□□□□ -0.64
PNKP-226ENST00000636840 RGPD5Q99666 1765 aa11.08□□□□□ -0.64
PNKP-226ENST00000636840 EIF4A2Q14240 407 aaKnown RBP11.07□□□□□ -0.64
PNKP-226ENST00000636840 ZCRB1Q8TBF4 217 aaKnown RBP11.07□□□□□ -0.64
PNKP-226ENST00000636840 DIAPH1O60610 1272 aaKnown RBP11.06□□□□□ -0.64
PNKP-226ENST00000636840 RALBP1Q15311 655 aa11.06□□□□□ -0.64
PNKP-226ENST00000636840 DDX54Q8TDD1 881 aaKnown RBP11.06□□□□□ -0.64
PNKP-226ENST00000636840 EYA1Q99502 592 aa11.06□□□□□ -0.64
PNKP-226ENST00000636840 NUDCQ9Y266 331 aa11.06□□□□□ -0.64
PNKP-226ENST00000636840 BAG6P46379 1132 aa11.05□□□□□ -0.64
PNKP-226ENST00000636840 FAM182BQ5T319 152 aa11.05□□□□□ -0.64
PNKP-226ENST00000636840 USHBP1Q8N6Y0 703 aa11.05□□□□□ -0.64
PNKP-226ENST00000636840 SPG7Q9UQ90 795 aa11.05□□□□□ -0.64
PNKP-226ENST00000636840 ANKRD26Q9UPS8 1709 aa11.04□□□□□ -0.64
PNKP-226ENST00000636840 MARCH10Q8NA82 808 aaPredicted RBP11.04□□□□□ -0.64
PNKP-226ENST00000636840 TRIM37O94972 964 aa11.03□□□□□ -0.64
PNKP-226ENST00000636840 PPP2R1AP30153 589 aa11.03□□□□□ -0.64
PNKP-226ENST00000636840 PLEKHO1Q53GL0 409 aaPredicted RBP11.03□□□□□ -0.64
PNKP-226ENST00000636840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.03□□□□□ -0.64
PNKP-226ENST00000636840 OVOS2A0A0G2JMS6 1433 aa11.02□□□□□ -0.64
PNKP-226ENST00000636840 U2SURPO15042 1029 aaKnown RBP11.02□□□□□ -0.65
PNKP-226ENST00000636840 APBA3O96018 575 aa11.02□□□□□ -0.65
PNKP-226ENST00000636840 IL13P35225 146 aa11.02□□□□□ -0.65
PNKP-226ENST00000636840 AMOTQ4VCS5 1084 aa11.02□□□□□ -0.65
PNKP-226ENST00000636840 FAM208AQ9UK61 1670 aaKnown RBP11.01□□□□□ -0.65
PNKP-226ENST00000636840 THSD7AQ9UPZ6 1657 aa11.01□□□□□ -0.65
PNKP-226ENST00000636840 DISP2A7MBM2 1401 aa11.01□□□□□ -0.65
PNKP-226ENST00000636840 KAT6BQ8WYB5 2073 aa11.01□□□□□ -0.65
PNKP-226ENST00000636840 BRWD3Q6RI45 1802 aa11.01□□□□□ -0.65
PNKP-226ENST00000636840 SULT6B1Q6IMI4 303 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms