RNA–Protein interactions for RNA: ENST00000636512.1

GABRB3-220, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 99 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-220ENST00000636512 ANO2Q9NQ90 1003 aa2.55□□□□□ -2
GABRB3-220ENST00000636512 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.55□□□□□ -2
GABRB3-220ENST00000636512 CEP126Q9P2H0 1117 aa2.55□□□□□ -2
GABRB3-220ENST00000636512 CADPSQ9ULU8 1353 aa2.55□□□□□ -2
GABRB3-220ENST00000636512 HAX1O00165 279 aa2.54□□□□□ -2
GABRB3-220ENST00000636512 PER1O15534 1290 aaPredicted RBP2.54□□□□□ -2
GABRB3-220ENST00000636512 NDUFB5O43674 189 aa2.54□□□□□ -2
GABRB3-220ENST00000636512 FMNL1O95466 1100 aaPredicted RBP2.54□□□□□ -2
GABRB3-220ENST00000636512 RECKO95980 971 aa2.54□□□□□ -2
GABRB3-220ENST00000636512 CFHP08603 1231 aa2.54□□□□□ -2
GABRB3-220ENST00000636512 SLC10A3P09131 477 aa2.54□□□□□ -2
GABRB3-220ENST00000636512 IBSPP21815 317 aaPredicted RBP2.54□□□□□ -2
GABRB3-220ENST00000636512 GTF2F1P35269 517 aaKnown RBP eCLIP2.54□□□□□ -2
GABRB3-220ENST00000636512 ARSIQ5FYB1 569 aa2.54□□□□□ -2
GABRB3-220ENST00000636512 SOGA3Q5TF21 947 aa2.54□□□□□ -2
GABRB3-220ENST00000636512 RNF20Q5VTR2 975 aa2.54□□□□□ -2
GABRB3-220ENST00000636512 LYPD8Q6UX82 237 aa2.54□□□□□ -2
GABRB3-220ENST00000636512 DPH6Q7L8W6 267 aa2.54□□□□□ -2
GABRB3-220ENST00000636512 VPS37DQ86XT2 251 aa2.54□□□□□ -2
GABRB3-220ENST00000636512 RGL4Q8IZJ4 473 aa2.54□□□□□ -2
GABRB3-220ENST00000636512 GTF3C2Q8WUA4 911 aaPredicted RBP2.54□□□□□ -2
GABRB3-220ENST00000636512 GPKOWQ92917 476 aaPredicted RBP eCLIP2.54□□□□□ -2
GABRB3-220ENST00000636512 RNF34Q969K3 372 aa2.54□□□□□ -2
GABRB3-220ENST00000636512 VTI1AQ96AJ9 217 aa2.54□□□□□ -2
GABRB3-220ENST00000636512 PRIMPOLQ96LW4 560 aa2.54□□□□□ -2
GABRB3-220ENST00000636512 HIRIP3Q9BW71 556 aaPredicted RBP2.54□□□□□ -2
GABRB3-220ENST00000636512 BACH2Q9BYV9 841 aa2.54□□□□□ -2
GABRB3-220ENST00000636512 CCSER2Q9H7U1 834 aa2.54□□□□□ -2
GABRB3-220ENST00000636512 ZSWIM6Q9HCJ5 1215 aa2.54□□□□□ -2
GABRB3-220ENST00000636512 CXXC1Q9P0U4 656 aaPredicted RBP2.54□□□□□ -2
GABRB3-220ENST00000636512 DOLKQ9UPQ8 538 aa2.54□□□□□ -2
GABRB3-220ENST00000636512 GPSM3Q9Y4H4 160 aa2.54□□□□□ -2
GABRB3-220ENST00000636512 SORBS3O60504 671 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 FAM13AO94988 1023 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 MAPK8P45983 427 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 GTF2IP78347 998 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 PLCB3Q01970 1234 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 FAM69CQ0P6D2 419 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 KCNH2Q12809 1159 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 OXLD1Q5BKU9 147 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 NOM1Q5C9Z4 860 aaKnown RBP2.53□□□□□ -2
GABRB3-220ENST00000636512 NBPF14Q5TI25 921 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 C9orf131Q5VYM1 1079 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 CCDC102BQ68D86 513 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 PDXDC2PQ6P474 469 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 NOL8Q76FK4 1167 aaKnown RBP2.53□□□□□ -2
GABRB3-220ENST00000636512 TAS1R3Q7RTX0 852 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 FBXO33Q7Z6M2 555 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 DZIP3Q86Y13 1208 aaKnown RBP2.53□□□□□ -2
GABRB3-220ENST00000636512 SIX5Q8N196 739 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 FAM174AQ8TBP5 190 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 TRIM52Q96A61 297 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 DNAJC2Q99543 621 aaKnown RBP2.53□□□□□ -2
GABRB3-220ENST00000636512 USB1Q9BQ65 265 aaKnown RBP2.53□□□□□ -2
GABRB3-220ENST00000636512 PRR14Q9BWN1 585 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 CAPN10Q9HC96 672 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 CWC22Q9HCG8 908 aaKnown RBP2.53□□□□□ -2
GABRB3-220ENST00000636512 CUEDC1Q9NWM3 386 aaPredicted RBP2.53□□□□□ -2
GABRB3-220ENST00000636512 NLRP2Q9NX02 1062 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 KIAA1468Q9P260 1216 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 BRPF3Q9ULD4 1205 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 LHX6Q9UPM6 363 aa2.53□□□□□ -2
GABRB3-220ENST00000636512 COLQQ9Y215 455 aaPredicted RBP2.53□□□□□ -2
GABRB3-220ENST00000636512 KDM4FA0A1W2PPD8 638 aa2.52□□□□□ -2.01
GABRB3-220ENST00000636512 SFI1A8K8P3 1242 aa2.52□□□□□ -2.01
GABRB3-220ENST00000636512 SCNN1AP37088 669 aa2.52□□□□□ -2.01
GABRB3-220ENST00000636512 CLDN10P78369 228 aa2.52□□□□□ -2.01
GABRB3-220ENST00000636512 TAGLNQ01995 201 aaKnown RBP2.52□□□□□ -2.01
GABRB3-220ENST00000636512 USP4Q13107 963 aa2.52□□□□□ -2.01
GABRB3-220ENST00000636512 PSMD2Q13200 908 aa2.52□□□□□ -2.01
GABRB3-220ENST00000636512 PROX2Q3B8N5 592 aa2.52□□□□□ -2.01
GABRB3-220ENST00000636512 ALKBH2Q6NS38 261 aa2.52□□□□□ -2.01
GABRB3-220ENST00000636512 NT5DC4Q86YG4 428 aa2.52□□□□□ -2.01
GABRB3-220ENST00000636512 FAM9AQ8IZU1 332 aaPredicted RBP2.52□□□□□ -2.01
GABRB3-220ENST00000636512 TPCN2Q8NHX9 752 aa2.52□□□□□ -2.01
GABRB3-220ENST00000636512 PIK3R5Q8WYR1 880 aa2.52□□□□□ -2.01
GABRB3-220ENST00000636512 KHSRPQ92945 711 aaKnown RBP eCLIP2.52□□□□□ -2.01
GABRB3-220ENST00000636512 CITED4Q96RK1 184 aa2.52□□□□□ -2.01
GABRB3-220ENST00000636512 KCNK17Q96T54 332 aa2.52□□□□□ -2.01
GABRB3-220ENST00000636512 ARHGAP9Q9BRR9 750 aa2.52□□□□□ -2.01
GABRB3-220ENST00000636512 MKNK1Q9BUB5 465 aa2.52□□□□□ -2.01
GABRB3-220ENST00000636512 TGIF2Q9GZN2 237 aa2.52□□□□□ -2.01
GABRB3-220ENST00000636512 METTL5Q9NRN9 209 aaKnown RBP2.52□□□□□ -2.01
GABRB3-220ENST00000636512 SLAIN2Q9P270 581 aa2.52□□□□□ -2.01
GABRB3-220ENST00000636512 VTI1BQ9UEU0 232 aa2.52□□□□□ -2.01
GABRB3-220ENST00000636512 PRKAG2Q9UGJ0 569 aa2.52□□□□□ -2.01
GABRB3-220ENST00000636512 TLDC2A0PJX2 215 aa2.51□□□□□ -2.01
GABRB3-220ENST00000636512 C3orf80F5H4A9 247 aa2.51□□□□□ -2.01
GABRB3-220ENST00000636512 PRPF40AO75400 957 aaKnown RBP2.51□□□□□ -2.01
GABRB3-220ENST00000636512 MYCP01106 439 aaPredicted RBP2.51□□□□□ -2.01
GABRB3-220ENST00000636512 LDHBP07195 334 aaKnown RBP2.51□□□□□ -2.01
GABRB3-220ENST00000636512 DNAJA1P31689 397 aaKnown RBP2.51□□□□□ -2.01
GABRB3-220ENST00000636512 ZNF76P36508 570 aa2.51□□□□□ -2.01
GABRB3-220ENST00000636512 IGBP1P78318 339 aa2.51□□□□□ -2.01
GABRB3-220ENST00000636512 HDLBPQ00341 1268 aaKnown RBP2.51□□□□□ -2.01
GABRB3-220ENST00000636512 PDE3BQ13370 1112 aa2.51□□□□□ -2.01
GABRB3-220ENST00000636512 NAA30Q147X3 362 aaPredicted RBP2.51□□□□□ -2.01
GABRB3-220ENST00000636512 AGERQ15109 404 aa2.51□□□□□ -2.01
GABRB3-220ENST00000636512 PTPRNQ16849 979 aa2.51□□□□□ -2.01
GABRB3-220ENST00000636512 MORN1Q5T089 497 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms