RNA–Protein interactions for RNA: ENST00000636367.1

SMARCA2-250, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-250ENST00000636367 DCTN4Q9UJW0 460 aa10.87□□□□□ -0.67
SMARCA2-250ENST00000636367 PIK3R5Q8WYR1 880 aa10.87□□□□□ -0.67
SMARCA2-250ENST00000636367 CEP126Q9P2H0 1117 aa10.87□□□□□ -0.67
SMARCA2-250ENST00000636367 NCLP19338 710 aaKnown RBP10.86□□□□□ -0.67
SMARCA2-250ENST00000636367 TSGA10IPQ3SY00 556 aa10.86□□□□□ -0.67
SMARCA2-250ENST00000636367 EAPPQ56P03 285 aaPredicted RBP10.86□□□□□ -0.67
SMARCA2-250ENST00000636367 TAS1R3Q7RTX0 852 aa10.86□□□□□ -0.67
SMARCA2-250ENST00000636367 MKNK1Q9BUB5 465 aa10.86□□□□□ -0.67
SMARCA2-250ENST00000636367 BCL2L12Q9HB09 334 aa10.86□□□□□ -0.67
SMARCA2-250ENST00000636367 LAMC3Q9Y6N6 1575 aa10.86□□□□□ -0.67
SMARCA2-250ENST00000636367 RAD51AP2Q09MP3 1159 aa10.85□□□□□ -0.67
SMARCA2-250ENST00000636367 MRPL58Q14197 206 aaKnown RBP10.85□□□□□ -0.67
SMARCA2-250ENST00000636367 LDLRAD1Q5T700 205 aa10.85□□□□□ -0.67
SMARCA2-250ENST00000636367 DNMT3AQ9Y6K1 912 aaPredicted RBP10.85□□□□□ -0.67
SMARCA2-250ENST00000636367 C21orf2O43822 256 aa10.85□□□□□ -0.67
SMARCA2-250ENST00000636367 ARHGAP4P98171 946 aa10.85□□□□□ -0.67
SMARCA2-250ENST00000636367 CAPN12Q6ZSI9 719 aa10.85□□□□□ -0.67
SMARCA2-250ENST00000636367 GTF3C2Q8WUA4 911 aaPredicted RBP10.85□□□□□ -0.67
SMARCA2-250ENST00000636367 DNAAF2Q9NVR5 837 aaKnown RBP10.85□□□□□ -0.67
SMARCA2-250ENST00000636367 ERCC6Q03468 1493 aa10.84□□□□□ -0.67
SMARCA2-250ENST00000636367 DKK1O94907 266 aa10.84□□□□□ -0.67
SMARCA2-250ENST00000636367 RETREG3Q86VR2 466 aa10.84□□□□□ -0.67
SMARCA2-250ENST00000636367 PHTF2Q8N3S3 785 aa10.84□□□□□ -0.67
SMARCA2-250ENST00000636367 TANGO6Q9C0B7 1094 aa10.83□□□□□ -0.68
SMARCA2-250ENST00000636367 MAP10Q9P2G4 905 aa10.83□□□□□ -0.68
SMARCA2-250ENST00000636367 LHX6Q9UPM6 363 aa10.83□□□□□ -0.68
SMARCA2-250ENST00000636367 P4HBP07237 508 aaKnown RBP10.83□□□□□ -0.68
SMARCA2-250ENST00000636367 PTPREP23469 700 aa10.83□□□□□ -0.68
SMARCA2-250ENST00000636367 EML3Q32P44 896 aa10.83□□□□□ -0.68
SMARCA2-250ENST00000636367 LYPD8Q6UX82 237 aa10.83□□□□□ -0.68
SMARCA2-250ENST00000636367 ZSCAN29Q8IWY8 852 aaPredicted RBP10.83□□□□□ -0.68
SMARCA2-250ENST00000636367 FAM161BQ96MY7 647 aa10.83□□□□□ -0.68
SMARCA2-250ENST00000636367 BRPF3Q9ULD4 1205 aa10.83□□□□□ -0.68
SMARCA2-250ENST00000636367 SCAMP3O14828 347 aaKnown RBP10.82□□□□□ -0.68
SMARCA2-250ENST00000636367 CFHP08603 1231 aa10.82□□□□□ -0.68
SMARCA2-250ENST00000636367 GRIPAP1Q4V328 841 aa10.82□□□□□ -0.68
SMARCA2-250ENST00000636367 LNPKQ9C0E8 428 aa10.82□□□□□ -0.68
SMARCA2-250ENST00000636367 CFTRP13569 1480 aa10.82□□□□□ -0.68
SMARCA2-250ENST00000636367 EVX2Q03828 476 aa10.81□□□□□ -0.68
SMARCA2-250ENST00000636367 PPP4R3BQ5MIZ7 849 aa10.81□□□□□ -0.68
SMARCA2-250ENST00000636367 DHX38Q92620 1227 aaKnown RBP10.81□□□□□ -0.68
SMARCA2-250ENST00000636367 PCDHB9Q9Y5E1 797 aa10.81□□□□□ -0.68
SMARCA2-250ENST00000636367 TRAF7Q6Q0C0 670 aa10.81□□□□□ -0.68
SMARCA2-250ENST00000636367 KIF21AQ7Z4S6 1674 aa10.8□□□□□ -0.68
SMARCA2-250ENST00000636367 SFI1A8K8P3 1242 aa10.8□□□□□ -0.68
SMARCA2-250ENST00000636367 LZTS3O60299 673 aaPredicted RBP10.8□□□□□ -0.68
SMARCA2-250ENST00000636367 ATP6V1AP38606 617 aa10.79□□□□□ -0.68
SMARCA2-250ENST00000636367 NT5DC4Q86YG4 428 aa10.79□□□□□ -0.68
SMARCA2-250ENST00000636367 RGL4Q8IZJ4 473 aa10.79□□□□□ -0.68
SMARCA2-250ENST00000636367 GAS2L2Q8NHY3 880 aa10.79□□□□□ -0.68
SMARCA2-250ENST00000636367 TINF2Q9BSI4 451 aa10.79□□□□□ -0.68
SMARCA2-250ENST00000636367 RNF19AQ9NV58 838 aa10.79□□□□□ -0.68
SMARCA2-250ENST00000636367 ZC3H4Q9UPT8 1303 aaKnown RBP10.79□□□□□ -0.68
SMARCA2-250ENST00000636367 PDS5BQ9NTI5 1447 aa10.79□□□□□ -0.68
SMARCA2-250ENST00000636367 ZBTB7BO15156 539 aaPredicted RBP10.78□□□□□ -0.68
SMARCA2-250ENST00000636367 DESI1Q6ICB0 168 aa10.78□□□□□ -0.68
SMARCA2-250ENST00000636367 OCSTAMPQ9BR26 566 aa10.78□□□□□ -0.68
SMARCA2-250ENST00000636367 PUS10Q3MIT2 529 aaKnown RBP10.78□□□□□ -0.68
SMARCA2-250ENST00000636367 METTL16Q86W50 562 aaKnown RBP10.78□□□□□ -0.68
SMARCA2-250ENST00000636367 PURBQ96QR8 312 aaKnown RBP10.78□□□□□ -0.68
SMARCA2-250ENST00000636367 KIAA1468Q9P260 1216 aa10.78□□□□□ -0.68
SMARCA2-250ENST00000636367 IQSEC3Q9UPP2 1182 aaPredicted RBP10.78□□□□□ -0.68
SMARCA2-250ENST00000636367 FMNL1O95466 1100 aaPredicted RBP10.77□□□□□ -0.69
SMARCA2-250ENST00000636367 F12P00748 615 aaPredicted RBP10.77□□□□□ -0.69
SMARCA2-250ENST00000636367 SIX5Q8N196 739 aa10.77□□□□□ -0.69
SMARCA2-250ENST00000636367 SEPT9Q9UHD8 586 aaPredicted RBP10.76□□□□□ -0.69
SMARCA2-250ENST00000636367 FANCD2Q9BXW9 1451 aa10.76□□□□□ -0.69
SMARCA2-250ENST00000636367 FKBP4Q02790 459 aaKnown RBP eCLIP10.76□□□□□ -0.69
SMARCA2-250ENST00000636367 LARGE2Q8N3Y3 721 aa10.76□□□□□ -0.69
SMARCA2-250ENST00000636367 TMEM87AQ8NBN3 555 aa10.76□□□□□ -0.69
SMARCA2-250ENST00000636367 PRKAG2Q9UGJ0 569 aa10.76□□□□□ -0.69
SMARCA2-250ENST00000636367 CHIC2Q9UKJ5 165 aa10.76□□□□□ -0.69
SMARCA2-250ENST00000636367 NOD1Q9Y239 953 aa10.76□□□□□ -0.69
SMARCA2-250ENST00000636367 ATP1A2P50993 1020 aa10.75□□□□□ -0.69
SMARCA2-250ENST00000636367 SEC13P55735 322 aa10.75□□□□□ -0.69
SMARCA2-250ENST00000636367 COL19A1Q14993 1142 aa10.75□□□□□ -0.69
SMARCA2-250ENST00000636367 TRIM50Q86XT4 487 aa10.75□□□□□ -0.69
SMARCA2-250ENST00000636367 BCL11AQ9H165 835 aa10.75□□□□□ -0.69
SMARCA2-250ENST00000636367 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.75□□□□□ -0.69
SMARCA2-250ENST00000636367 SLC27A5Q9Y2P5 690 aa10.75□□□□□ -0.69
SMARCA2-250ENST00000636367 TMC7Q7Z402 723 aa10.74□□□□□ -0.69
SMARCA2-250ENST00000636367 CAPN10Q9HC96 672 aa10.74□□□□□ -0.69
SMARCA2-250ENST00000636367 GTF2F1P35269 517 aaKnown RBP eCLIP10.74□□□□□ -0.69
SMARCA2-250ENST00000636367 GTF2IP78347 998 aa10.74□□□□□ -0.69
SMARCA2-250ENST00000636367 OXLD1Q5BKU9 147 aa10.74□□□□□ -0.69
SMARCA2-250ENST00000636367 CCDC102BQ68D86 513 aa10.74□□□□□ -0.69
SMARCA2-250ENST00000636367 RNF19BQ6ZMZ0 732 aa10.74□□□□□ -0.69
SMARCA2-250ENST00000636367 TPCN2Q8NHX9 752 aa10.74□□□□□ -0.69
SMARCA2-250ENST00000636367 PRDM2Q13029 1718 aa10.74□□□□□ -0.69
SMARCA2-250ENST00000636367 CEP164Q9UPV0 1460 aa10.73□□□□□ -0.69
SMARCA2-250ENST00000636367 FKBP5Q13451 457 aaPredicted RBP10.73□□□□□ -0.69
SMARCA2-250ENST00000636367 GPR153Q6NV75 609 aa10.73□□□□□ -0.69
SMARCA2-250ENST00000636367 MAP7D1Q3KQU3 841 aa10.72□□□□□ -0.69
SMARCA2-250ENST00000636367 CCDC144BQ3MJ40 725 aa10.72□□□□□ -0.69
SMARCA2-250ENST00000636367 MORN1Q5T089 497 aa10.72□□□□□ -0.69
SMARCA2-250ENST00000636367 CCDC85AQ96PX6 553 aaPredicted RBP10.72□□□□□ -0.69
SMARCA2-250ENST00000636367 HINFPQ9BQA5 517 aa10.72□□□□□ -0.69
SMARCA2-250ENST00000636367 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.72□□□□□ -0.69
SMARCA2-250ENST00000636367 RNF40O75150 1001 aa10.72□□□□□ -0.69
SMARCA2-250ENST00000636367 TNNI2P48788 182 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms