RNA–Protein interactions for RNA: ENST00000636116.1

SYNGAP1-211, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 161 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-211ENST00000636116 BRD4O60885 1362 aaPredicted RBP10.76□□□□□ -0.69
SYNGAP1-211ENST00000636116 KIAA1210Q9ULL0 1709 aa10.75□□□□□ -0.69
SYNGAP1-211ENST00000636116 CSB-PGBD3P0DP91 1061 aa10.75□□□□□ -0.69
SYNGAP1-211ENST00000636116 ARHGEF25Q86VW2 580 aa10.75□□□□□ -0.69
SYNGAP1-211ENST00000636116 TTC21BQ7Z4L5 1316 aa10.75□□□□□ -0.69
SYNGAP1-211ENST00000636116 NINLQ9Y2I6 1382 aa10.75□□□□□ -0.69
SYNGAP1-211ENST00000636116 SBF2Q86WG5 1849 aa10.74□□□□□ -0.69
SYNGAP1-211ENST00000636116 SLIT3O75094 1523 aa10.74□□□□□ -0.69
SYNGAP1-211ENST00000636116 LRRC37A3O60309 1634 aa10.74□□□□□ -0.69
SYNGAP1-211ENST00000636116 EXOC5O00471 708 aa10.74□□□□□ -0.69
SYNGAP1-211ENST00000636116 PTGER2P43116 358 aa10.74□□□□□ -0.69
SYNGAP1-211ENST00000636116 TXNRD1Q16881 649 aa10.74□□□□□ -0.69
SYNGAP1-211ENST00000636116 L3MBTL2Q969R5 705 aa10.74□□□□□ -0.69
SYNGAP1-211ENST00000636116 CARD10Q9BWT7 1032 aa10.74□□□□□ -0.69
SYNGAP1-211ENST00000636116 COL18A1P39060 1754 aa10.74□□□□□ -0.69
SYNGAP1-211ENST00000636116 CDCA7Q9BWT1 371 aaPredicted RBP10.73□□□□□ -0.69
SYNGAP1-211ENST00000636116 EVC2Q86UK5 1308 aa10.73□□□□□ -0.69
SYNGAP1-211ENST00000636116 QRICH2Q9H0J4 1663 aa10.73□□□□□ -0.69
SYNGAP1-211ENST00000636116 SLC15A2Q16348 729 aa10.72□□□□□ -0.69
SYNGAP1-211ENST00000636116 KCNH5Q8NCM2 988 aa10.72□□□□□ -0.69
SYNGAP1-211ENST00000636116 ACSBG1Q96GR2 724 aa10.72□□□□□ -0.69
SYNGAP1-211ENST00000636116 ZNF692Q9BU19 519 aaPredicted RBP10.72□□□□□ -0.69
SYNGAP1-211ENST00000636116 STK32BQ9NY57 414 aa10.72□□□□□ -0.69
SYNGAP1-211ENST00000636116 CPSF1Q10570 1443 aaKnown RBP10.72□□□□□ -0.69
SYNGAP1-211ENST00000636116 PIK3C2AO00443 1686 aa10.72□□□□□ -0.69
SYNGAP1-211ENST00000636116 CASZ1Q86V15 1759 aa10.71□□□□□ -0.69
SYNGAP1-211ENST00000636116 SIN3AQ96ST3 1273 aa10.71□□□□□ -0.69
SYNGAP1-211ENST00000636116 RGPD5Q99666 1765 aa10.71□□□□□ -0.69
SYNGAP1-211ENST00000636116 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.7□□□□□ -0.7
SYNGAP1-211ENST00000636116 SYT17Q9BSW7 474 aa10.7□□□□□ -0.7
SYNGAP1-211ENST00000636116 FHDC1Q9C0D6 1143 aaPredicted RBP10.7□□□□□ -0.7
SYNGAP1-211ENST00000636116 RGPD3A6NKT7 1758 aaPredicted RBP10.7□□□□□ -0.7
SYNGAP1-211ENST00000636116 RGPD4Q7Z3J3 1758 aa10.7□□□□□ -0.7
SYNGAP1-211ENST00000636116 BCL9O00512 1426 aa10.69□□□□□ -0.7
SYNGAP1-211ENST00000636116 NEUROD1Q13562 356 aa10.69□□□□□ -0.7
SYNGAP1-211ENST00000636116 ZNF784Q8NCA9 323 aaPredicted RBP10.69□□□□□ -0.7
SYNGAP1-211ENST00000636116 NLRP2Q9NX02 1062 aa10.69□□□□□ -0.7
SYNGAP1-211ENST00000636116 KTN1Q86UP2 1357 aaKnown RBP10.68□□□□□ -0.7
SYNGAP1-211ENST00000636116 TTC21AQ8NDW8 1320 aa10.68□□□□□ -0.7
SYNGAP1-211ENST00000636116 SGIP1Q9BQI5 828 aa10.68□□□□□ -0.7
SYNGAP1-211ENST00000636116 MTFR1LQ9H019 292 aa10.68□□□□□ -0.7
SYNGAP1-211ENST00000636116 MYOM1P52179 1685 aa10.68□□□□□ -0.7
SYNGAP1-211ENST00000636116 AKAP12Q02952 1782 aa10.67□□□□□ -0.7
SYNGAP1-211ENST00000636116 CCDC7Q96M83 1385 aa10.67□□□□□ -0.7
SYNGAP1-211ENST00000636116 NME9Q86XW9 330 aa10.67□□□□□ -0.7
SYNGAP1-211ENST00000636116 WNK3Q9BYP7 1800 aa10.67□□□□□ -0.7
SYNGAP1-211ENST00000636116 ARXQ96QS3 562 aa10.66□□□□□ -0.7
SYNGAP1-211ENST00000636116 LRRC4BQ9NT99 713 aa10.66□□□□□ -0.7
SYNGAP1-211ENST00000636116 NFAT5O94916 1531 aa10.66□□□□□ -0.7
SYNGAP1-211ENST00000636116 TRPM1Q7Z4N2 1603 aa10.66□□□□□ -0.7
SYNGAP1-211ENST00000636116 ROCK2O75116 1388 aaKnown RBP10.65□□□□□ -0.7
SYNGAP1-211ENST00000636116 IL2RBP14784 551 aa10.65□□□□□ -0.7
SYNGAP1-211ENST00000636116 ZNF827Q17R98 1081 aa10.65□□□□□ -0.7
SYNGAP1-211ENST00000636116 KAT6BQ8WYB5 2073 aa10.65□□□□□ -0.7
SYNGAP1-211ENST00000636116 TNS2Q63HR2 1409 aa10.65□□□□□ -0.7
SYNGAP1-211ENST00000636116 ERBB3P21860 1342 aa10.64□□□□□ -0.71
SYNGAP1-211ENST00000636116 TMC1Q8TDI8 760 aa10.64□□□□□ -0.71
SYNGAP1-211ENST00000636116 ANKRD24Q8TF21 1146 aa10.64□□□□□ -0.71
SYNGAP1-211ENST00000636116 SLC12A5Q9H2X9 1139 aa10.64□□□□□ -0.71
SYNGAP1-211ENST00000636116 KCNQ4P56696 695 aa10.63□□□□□ -0.71
SYNGAP1-211ENST00000636116 DDX54Q8TDD1 881 aaKnown RBP10.63□□□□□ -0.71
SYNGAP1-211ENST00000636116 USP31Q70CQ4 1352 aa10.63□□□□□ -0.71
SYNGAP1-211ENST00000636116 GPR162Q16538 588 aa10.62□□□□□ -0.71
SYNGAP1-211ENST00000636116 KLHL34Q8N239 644 aa10.62□□□□□ -0.71
SYNGAP1-211ENST00000636116 LTV1Q96GA3 475 aaPredicted RBP10.62□□□□□ -0.71
SYNGAP1-211ENST00000636116 SBNO2Q9Y2G9 1366 aa10.62□□□□□ -0.71
SYNGAP1-211ENST00000636116 NHSQ6T4R5 1651 aa10.61□□□□□ -0.71
SYNGAP1-211ENST00000636116 AKT1S1Q96B36 256 aa10.61□□□□□ -0.71
SYNGAP1-211ENST00000636116 CD163L1Q9NR16 1453 aa10.61□□□□□ -0.71
SYNGAP1-211ENST00000636116 ABCC6O95255 1503 aa10.6□□□□□ -0.71
SYNGAP1-211ENST00000636116 SENP3-EIF4A1A0A087X0R7 540 aa10.6□□□□□ -0.71
SYNGAP1-211ENST00000636116 FBLN1P23142 703 aa10.6□□□□□ -0.71
SYNGAP1-211ENST00000636116 PRIM1P49642 420 aaKnown RBP10.6□□□□□ -0.71
SYNGAP1-211ENST00000636116 C1QTNF8P60827 252 aa10.6□□□□□ -0.71
SYNGAP1-211ENST00000636116 HDGFL2Q7Z4V5 671 aaPredicted RBP10.6□□□□□ -0.71
SYNGAP1-211ENST00000636116 PELP1Q8IZL8 1130 aaKnown RBP10.6□□□□□ -0.71
SYNGAP1-211ENST00000636116 SYTL4Q96C24 671 aaPredicted RBP10.6□□□□□ -0.71
SYNGAP1-211ENST00000636116 CARD11Q9BXL7 1154 aa10.6□□□□□ -0.71
SYNGAP1-211ENST00000636116 BTAF1O14981 1849 aa10.6□□□□□ -0.71
SYNGAP1-211ENST00000636116 IP6K1Q92551 441 aa10.59□□□□□ -0.71
SYNGAP1-211ENST00000636116 TFCP2L1Q9NZI6 479 aa10.59□□□□□ -0.71
SYNGAP1-211ENST00000636116 PNPLA7Q6ZV29 1317 aa10.58□□□□□ -0.71
SYNGAP1-211ENST00000636116 PAPPAQ13219 1627 aa10.58□□□□□ -0.72
SYNGAP1-211ENST00000636116 MON2Q7Z3U7 1717 aa10.58□□□□□ -0.72
SYNGAP1-211ENST00000636116 LTN1O94822 1766 aa10.58□□□□□ -0.72
SYNGAP1-211ENST00000636116 NLGN2Q8NFZ4 835 aa10.58□□□□□ -0.72
SYNGAP1-211ENST00000636116 SLC16A10Q8TF71 515 aa10.58□□□□□ -0.72
SYNGAP1-211ENST00000636116 CHD4Q14839 1912 aa10.58□□□□□ -0.72
SYNGAP1-211ENST00000636116 UTRNP46939 3433 aa10.58□□□□□ -0.72
SYNGAP1-211ENST00000636116 MAP3K5Q99683 1374 aa10.57□□□□□ -0.72
SYNGAP1-211ENST00000636116 POLD1P28340 1107 aa10.57□□□□□ -0.72
SYNGAP1-211ENST00000636116 SLC27A3Q5K4L6 730 aa10.57□□□□□ -0.72
SYNGAP1-211ENST00000636116 TERF2IPQ9NYB0 399 aa10.57□□□□□ -0.72
SYNGAP1-211ENST00000636116 A0A1W2PP64 1363 aa10.56□□□□□ -0.72
SYNGAP1-211ENST00000636116 MSH5O43196 834 aa10.56□□□□□ -0.72
SYNGAP1-211ENST00000636116 EDC4Q6P2E9 1401 aaKnown RBP10.56□□□□□ -0.72
SYNGAP1-211ENST00000636116 ZCRB1Q8TBF4 217 aaKnown RBP10.55□□□□□ -0.72
SYNGAP1-211ENST00000636116 MAP3K19Q56UN5 1328 aa10.55□□□□□ -0.72
SYNGAP1-211ENST00000636116 USP54Q70EL1 1684 aa10.54□□□□□ -0.72
SYNGAP1-211ENST00000636116 HOXC9P31274 260 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms