RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 SPATA31A1Q5TZJ5 1347 aa23.47■■□□□ 1.35
LIN28B-202ENST00000635857 COL18A1P39060 1754 aa23.47■■□□□ 1.35
LIN28B-202ENST00000635857 CSB-PGBD3P0DP91 1061 aa23.46■■□□□ 1.35
LIN28B-202ENST00000635857 CGNL1Q0VF96 1302 aa23.46■■□□□ 1.35
LIN28B-202ENST00000635857 GGNBP2Q9H3C7 697 aa23.46■■□□□ 1.35
LIN28B-202ENST00000635857 CRB1P82279 1406 aa23.45■■□□□ 1.34
LIN28B-202ENST00000635857 FYB1O15117 783 aa23.45■■□□□ 1.34
LIN28B-202ENST00000635857 LARP1Q6PKG0 1096 aaKnown RBP23.45■■□□□ 1.34
LIN28B-202ENST00000635857 RGPD5Q99666 1765 aa23.45■■□□□ 1.34
LIN28B-202ENST00000635857 TOM1L2Q6ZVM7 507 aa23.44■■□□□ 1.34
LIN28B-202ENST00000635857 ONECUT3O60422 494 aaPredicted RBP23.43■■□□□ 1.34
LIN28B-202ENST00000635857 BRWD3Q6RI45 1802 aa23.43■■□□□ 1.34
LIN28B-202ENST00000635857 WDR17Q8IZU2 1322 aa23.42■■□□□ 1.34
LIN28B-202ENST00000635857 TCP11L2Q8N4U5 519 aa23.42■■□□□ 1.34
LIN28B-202ENST00000635857 CARD14Q9BXL6 1004 aa23.42■■□□□ 1.34
LIN28B-202ENST00000635857 THRAP3Q9Y2W1 955 aaKnown RBP23.42■■□□□ 1.34
LIN28B-202ENST00000635857 KIF7Q2M1P5 1343 aa23.41■■□□□ 1.34
LIN28B-202ENST00000635857 AXIN2Q9Y2T1 843 aa23.41■■□□□ 1.34
LIN28B-202ENST00000635857 C11orf95C9JLR9 678 aaPredicted RBP23.4■■□□□ 1.34
LIN28B-202ENST00000635857 KRT27Q7Z3Y8 459 aa23.4■■□□□ 1.34
LIN28B-202ENST00000635857 PANK3Q9H999 370 aa23.4■■□□□ 1.34
LIN28B-202ENST00000635857 THSD7AQ9UPZ6 1657 aa23.4■■□□□ 1.34
LIN28B-202ENST00000635857 AMPHP49418 695 aa23.39■■□□□ 1.33
LIN28B-202ENST00000635857 BARGINQ6ZT62 677 aa23.39■■□□□ 1.33
LIN28B-202ENST00000635857 BLMP54132 1417 aaPredicted RBP23.39■■□□□ 1.33
LIN28B-202ENST00000635857 ANKRD26Q9UPS8 1709 aa23.37■■□□□ 1.33
LIN28B-202ENST00000635857 UPF1Q92900 1129 aaKnown RBP eCLIP23.37■■□□□ 1.33
LIN28B-202ENST00000635857 KNSTRNQ9Y448 316 aa23.36■■□□□ 1.33
LIN28B-202ENST00000635857 RTL1A6NKG5 1358 aa23.36■■□□□ 1.33
LIN28B-202ENST00000635857 ERBB3P21860 1342 aa23.35■■□□□ 1.33
LIN28B-202ENST00000635857 MAP3K19Q56UN5 1328 aa23.35■■□□□ 1.33
LIN28B-202ENST00000635857 IP6K1Q92551 441 aa23.35■■□□□ 1.33
LIN28B-202ENST00000635857 NSD2O96028 1365 aa23.35■■□□□ 1.33
LIN28B-202ENST00000635857 FAM208AQ9UK61 1670 aaKnown RBP23.35■■□□□ 1.33
LIN28B-202ENST00000635857 ANKRD24Q8TF21 1146 aa23.34■■□□□ 1.33
LIN28B-202ENST00000635857 CCDC7Q96M83 1385 aa23.34■■□□□ 1.33
LIN28B-202ENST00000635857 WNK3Q9BYP7 1800 aa23.33■■□□□ 1.33
LIN28B-202ENST00000635857 PDE3BQ13370 1112 aa23.33■■□□□ 1.33
LIN28B-202ENST00000635857 RRS1Q15050 365 aaKnown RBP23.33■■□□□ 1.33
LIN28B-202ENST00000635857 CARD10Q9BWT7 1032 aa23.33■■□□□ 1.33
LIN28B-202ENST00000635857 NLRP2Q9NX02 1062 aa23.33■■□□□ 1.33
LIN28B-202ENST00000635857 SMG6Q86US8 1419 aaKnown RBP23.33■■□□□ 1.32
LIN28B-202ENST00000635857 HOXC9P31274 260 aa23.32■■□□□ 1.32
LIN28B-202ENST00000635857 CDCA7Q9BWT1 371 aaPredicted RBP23.32■■□□□ 1.32
LIN28B-202ENST00000635857 PARP4Q9UKK3 1724 aaKnown RBP23.32■■□□□ 1.32
LIN28B-202ENST00000635857 FBLN1P23142 703 aa23.3■■□□□ 1.32
LIN28B-202ENST00000635857 SF3B2Q13435 895 aaKnown RBP23.3■■□□□ 1.32
LIN28B-202ENST00000635857 CCDC125Q86Z20 511 aa23.3■■□□□ 1.32
LIN28B-202ENST00000635857 LTV1Q96GA3 475 aaPredicted RBP23.3■■□□□ 1.32
LIN28B-202ENST00000635857 FLT4P35916 1363 aa23.29■■□□□ 1.32
LIN28B-202ENST00000635857 KIF24Q5T7B8 1368 aa23.29■■□□□ 1.32
LIN28B-202ENST00000635857 WASHC2AQ641Q2 1341 aa23.29■■□□□ 1.32
LIN28B-202ENST00000635857 ZEB1P37275 1124 aaPredicted RBP23.27■■□□□ 1.32
LIN28B-202ENST00000635857 DDB1Q16531 1140 aa23.27■■□□□ 1.32
LIN28B-202ENST00000635857 PPM1GO15355 546 aaPredicted RBP23.26■■□□□ 1.31
LIN28B-202ENST00000635857 MAP2P11137 1827 aaKnown RBP23.26■■□□□ 1.31
LIN28B-202ENST00000635857 LRRC37A3O60309 1634 aa23.26■■□□□ 1.31
LIN28B-202ENST00000635857 TNNT2P45379 298 aaPredicted RBP23.25■■□□□ 1.31
LIN28B-202ENST00000635857 MORC1Q86VD1 984 aa23.25■■□□□ 1.31
LIN28B-202ENST00000635857 PEAK1Q9H792 1746 aa23.23■■□□□ 1.31
LIN28B-202ENST00000635857 FAM196AQ6ZSG2 479 aa23.23■■□□□ 1.31
LIN28B-202ENST00000635857 EMILIN1Q9Y6C2 1016 aa23.23■■□□□ 1.31
LIN28B-202ENST00000635857 INSRP06213 1382 aa23.23■■□□□ 1.31
LIN28B-202ENST00000635857 RGPD1P0DJD0 1748 aa23.22■■□□□ 1.31
LIN28B-202ENST00000635857 IL2RBP14784 551 aa23.22■■□□□ 1.31
LIN28B-202ENST00000635857 FAM182BQ5T319 152 aa23.22■■□□□ 1.31
LIN28B-202ENST00000635857 EP400Q96L91 3159 aa23.22■■□□□ 1.31
LIN28B-202ENST00000635857 EXOC5O00471 708 aa23.21■■□□□ 1.31
LIN28B-202ENST00000635857 OVOS2A0A0G2JMS6 1433 aa23.2■■□□□ 1.3
LIN28B-202ENST00000635857 DISP2A7MBM2 1401 aa23.2■■□□□ 1.3
LIN28B-202ENST00000635857 HSP90AB2PQ58FF8 381 aa23.19■■□□□ 1.3
LIN28B-202ENST00000635857 TNS2Q63HR2 1409 aa23.18■■□□□ 1.3
LIN28B-202ENST00000635857 RGPD2P0DJD1 1756 aa23.18■■□□□ 1.3
LIN28B-202ENST00000635857 AMER1Q5JTC6 1135 aaPredicted RBP23.17■■□□□ 1.3
LIN28B-202ENST00000635857 POLKQ9UBT6 870 aa23.17■■□□□ 1.3
LIN28B-202ENST00000635857 BAG6P46379 1132 aa23.16■■□□□ 1.3
LIN28B-202ENST00000635857 CC2D1BQ5T0F9 858 aaKnown RBP23.15■■□□□ 1.3
LIN28B-202ENST00000635857 RAPGEF4Q8WZA2 1011 aa23.14■■□□□ 1.29
LIN28B-202ENST00000635857 PER1O15534 1290 aaPredicted RBP23.13■■□□□ 1.29
LIN28B-202ENST00000635857 TRIM37O94972 964 aa23.12■■□□□ 1.29
LIN28B-202ENST00000635857 CNGB1Q14028 1251 aaPredicted RBP23.12■■□□□ 1.29
LIN28B-202ENST00000635857 NBPF6Q5VWK0 638 aa23.12■■□□□ 1.29
LIN28B-202ENST00000635857 NBPF4Q96M43 638 aa23.12■■□□□ 1.29
LIN28B-202ENST00000635857 NPC1L1Q9UHC9 1359 aa23.12■■□□□ 1.29
LIN28B-202ENST00000635857 TNS1Q9HBL0 1735 aaKnown RBP23.11■■□□□ 1.29
LIN28B-202ENST00000635857 USHBP1Q8N6Y0 703 aa23.11■■□□□ 1.29
LIN28B-202ENST00000635857 TATP17735 454 aaPredicted RBP23.1■■□□□ 1.29
LIN28B-202ENST00000635857 MARCH10Q8NA82 808 aaPredicted RBP23.09■■□□□ 1.29
LIN28B-202ENST00000635857 DEFB132Q7Z7B7 95 aa23.07■■□□□ 1.28
LIN28B-202ENST00000635857 SBF2Q86WG5 1849 aa23.07■■□□□ 1.28
LIN28B-202ENST00000635857 MEGF6O75095 1541 aa23.07■■□□□ 1.28
LIN28B-202ENST00000635857 APBA3O96018 575 aa23.06■■□□□ 1.28
LIN28B-202ENST00000635857 BCL9O00512 1426 aa23.06■■□□□ 1.28
LIN28B-202ENST00000635857 EIF4A2Q14240 407 aaKnown RBP23.05■■□□□ 1.28
LIN28B-202ENST00000635857 ZCRB1Q8TBF4 217 aaKnown RBP23.05■■□□□ 1.28
LIN28B-202ENST00000635857 DDX54Q8TDD1 881 aaKnown RBP23.05■■□□□ 1.28
LIN28B-202ENST00000635857 EYA1Q99502 592 aa23.03■■□□□ 1.28
LIN28B-202ENST00000635857 EN1Q05925 392 aaPredicted RBP23.02■■□□□ 1.28
LIN28B-202ENST00000635857 MTHFSP49914 203 aa23.01■■□□□ 1.27
LIN28B-202ENST00000635857 BCL11BQ9C0K0 894 aaPredicted RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms