RNA–Protein interactions for RNA: ENST00000635397.1

SMARCA2-241, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 4

Gene SMARCA2, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-241ENST00000635397 SLC10A4Q96EP9 437 aa9.69□□□□□ -0.86
SMARCA2-241ENST00000635397 MKRN1Q9UHC7 482 aaKnown RBP9.69□□□□□ -0.86
SMARCA2-241ENST00000635397 RNF223E7ERA6 249 aa9.68□□□□□ -0.86
SMARCA2-241ENST00000635397 LZTS3O60299 673 aaPredicted RBP9.68□□□□□ -0.86
SMARCA2-241ENST00000635397 SH3BP2P78314 561 aa9.68□□□□□ -0.86
SMARCA2-241ENST00000635397 EML3Q32P44 896 aa9.68□□□□□ -0.86
SMARCA2-241ENST00000635397 MAP7D1Q3KQU3 841 aa9.68□□□□□ -0.86
SMARCA2-241ENST00000635397 GIGYF1O75420 1035 aaPredicted RBP9.67□□□□□ -0.86
SMARCA2-241ENST00000635397 CHIC2Q9UKJ5 165 aa9.67□□□□□ -0.86
SMARCA2-241ENST00000635397 ATP5J2-PTCD1G3V325 749 aa9.66□□□□□ -0.86
SMARCA2-241ENST00000635397 ELOAQ14241 798 aaKnown RBP9.66□□□□□ -0.86
SMARCA2-241ENST00000635397 TSGA10IPQ3SY00 556 aa9.66□□□□□ -0.86
SMARCA2-241ENST00000635397 LARP1Q6PKG0 1096 aaKnown RBP9.66□□□□□ -0.86
SMARCA2-241ENST00000635397 ANKLE1Q8NAG6 615 aa9.66□□□□□ -0.86
SMARCA2-241ENST00000635397 TMEM88BA6NKF7 163 aa9.65□□□□□ -0.86
SMARCA2-241ENST00000635397 FAM196BA6NMK8 535 aa9.65□□□□□ -0.86
SMARCA2-241ENST00000635397 BRD1O95696 1058 aa9.65□□□□□ -0.86
SMARCA2-241ENST00000635397 RASA1P20936 1047 aa9.65□□□□□ -0.86
SMARCA2-241ENST00000635397 RNF20Q5VTR2 975 aa9.65□□□□□ -0.86
SMARCA2-241ENST00000635397 TRAF7Q6Q0C0 670 aa9.65□□□□□ -0.86
SMARCA2-241ENST00000635397 CCDC85AQ96PX6 553 aaPredicted RBP9.65□□□□□ -0.86
SMARCA2-241ENST00000635397 C1QTNF2Q9BXJ5 285 aa9.65□□□□□ -0.86
SMARCA2-241ENST00000635397 NOVA2Q9UNW9 492 aaKnown RBP9.65□□□□□ -0.86
SMARCA2-241ENST00000635397 DOLKQ9UPQ8 538 aa9.65□□□□□ -0.86
SMARCA2-241ENST00000635397 USP17L15C9J2P7 530 aa9.64□□□□□ -0.87
SMARCA2-241ENST00000635397 USP17L10C9JJH3 530 aa9.64□□□□□ -0.87
SMARCA2-241ENST00000635397 USP17L13C9JLJ4 530 aa9.64□□□□□ -0.87
SMARCA2-241ENST00000635397 USP17L12C9JPN9 530 aa9.64□□□□□ -0.87
SMARCA2-241ENST00000635397 USP17L11C9JVI0 530 aa9.64□□□□□ -0.87
SMARCA2-241ENST00000635397 USP17L21D6R901 530 aa9.64□□□□□ -0.87
SMARCA2-241ENST00000635397 USP17L18D6R9N7 530 aa9.64□□□□□ -0.87
SMARCA2-241ENST00000635397 USP17L22D6RA61 530 aa9.64□□□□□ -0.87
SMARCA2-241ENST00000635397 USP17L17D6RBQ6 530 aa9.64□□□□□ -0.87
SMARCA2-241ENST00000635397 USP17L19D6RCP7 530 aa9.64□□□□□ -0.87
SMARCA2-241ENST00000635397 USP17L20D6RJB6 530 aa9.64□□□□□ -0.87
SMARCA2-241ENST00000635397 USP17L24Q0WX57 530 aa9.64□□□□□ -0.87
SMARCA2-241ENST00000635397 TRIM32Q13049 653 aa9.64□□□□□ -0.87
SMARCA2-241ENST00000635397 NBPF20Q3BBV1 942 aa9.64□□□□□ -0.87
SMARCA2-241ENST00000635397 PLA2G2CQ5R387 149 aa9.64□□□□□ -0.87
SMARCA2-241ENST00000635397 SPNS2Q8IVW8 549 aa9.64□□□□□ -0.87
SMARCA2-241ENST00000635397 CDV3Q9UKY7 258 aaKnown RBP9.64□□□□□ -0.87
SMARCA2-241ENST00000635397 ZMIZ1Q9ULJ6 1067 aa9.64□□□□□ -0.87
SMARCA2-241ENST00000635397 CRTC2Q53ET0 693 aaPredicted RBP9.63□□□□□ -0.87
SMARCA2-241ENST00000635397 OXLD1Q5BKU9 147 aa9.63□□□□□ -0.87
SMARCA2-241ENST00000635397 TRMT44Q8IYL2 757 aaKnown RBP9.63□□□□□ -0.87
SMARCA2-241ENST00000635397 STK32AQ8WU08 396 aa9.63□□□□□ -0.87
SMARCA2-241ENST00000635397 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.63□□□□□ -0.87
SMARCA2-241ENST00000635397 NOD1Q9Y239 953 aa9.63□□□□□ -0.87
SMARCA2-241ENST00000635397 PATL2C9JE40 543 aaKnown RBP9.62□□□□□ -0.87
SMARCA2-241ENST00000635397 PTK7Q13308 1070 aa9.62□□□□□ -0.87
SMARCA2-241ENST00000635397 TMEM164Q5U3C3 297 aa9.62□□□□□ -0.87
SMARCA2-241ENST00000635397 PPP1R18Q6NYC8 613 aa9.62□□□□□ -0.87
SMARCA2-241ENST00000635397 TRIM50Q86XT4 487 aa9.62□□□□□ -0.87
SMARCA2-241ENST00000635397 PCDH10Q9P2E7 1040 aa9.62□□□□□ -0.87
SMARCA2-241ENST00000635397 WNT7BP56706 349 aa9.61□□□□□ -0.87
SMARCA2-241ENST00000635397 KCNA1Q09470 495 aa9.61□□□□□ -0.87
SMARCA2-241ENST00000635397 OGFOD1Q8N543 542 aa9.61□□□□□ -0.87
SMARCA2-241ENST00000635397 ESPNB1AK53 854 aa9.6□□□□□ -0.87
SMARCA2-241ENST00000635397 VARSP26640 1264 aaKnown RBP9.6□□□□□ -0.87
SMARCA2-241ENST00000635397 ATP1A2P50993 1020 aa9.6□□□□□ -0.87
SMARCA2-241ENST00000635397 SKOR1P84550 965 aa9.6□□□□□ -0.87
SMARCA2-241ENST00000635397 SEPT12Q8IYM1 358 aa9.6□□□□□ -0.87
SMARCA2-241ENST00000635397 FAM200AQ8TCP9 573 aa9.6□□□□□ -0.87
SMARCA2-241ENST00000635397 PCDHB11Q9Y5F2 797 aa9.6□□□□□ -0.87
SMARCA2-241ENST00000635397 RPIAP49247 311 aa9.59□□□□□ -0.87
SMARCA2-241ENST00000635397 RAB15P59190 212 aa9.59□□□□□ -0.87
SMARCA2-241ENST00000635397 ANKMY2Q8IV38 441 aa9.59□□□□□ -0.87
SMARCA2-241ENST00000635397 GZF1Q9H116 711 aaPredicted RBP9.59□□□□□ -0.87
SMARCA2-241ENST00000635397 DNAAF2Q9NVR5 837 aaKnown RBP9.59□□□□□ -0.87
SMARCA2-241ENST00000635397 CCDC9Q9Y3X0 531 aaKnown RBP9.59□□□□□ -0.87
SMARCA2-241ENST00000635397 CLDN10P78369 228 aa9.58□□□□□ -0.88
SMARCA2-241ENST00000635397 VASH1Q7L8A9 365 aaPredicted RBP9.58□□□□□ -0.88
SMARCA2-241ENST00000635397 CCDC125Q86Z20 511 aa9.58□□□□□ -0.88
SMARCA2-241ENST00000635397 ZNF594Q96JF6 807 aaPredicted RBP9.58□□□□□ -0.88
SMARCA2-241ENST00000635397 KCTD15Q96SI1 283 aaPredicted RBP9.58□□□□□ -0.88
SMARCA2-241ENST00000635397 CDCA7Q9BWT1 371 aaPredicted RBP9.58□□□□□ -0.88
SMARCA2-241ENST00000635397 CD2BP2O95400 341 aaKnown RBP9.57□□□□□ -0.88
SMARCA2-241ENST00000635397 GTF2IP78347 998 aa9.57□□□□□ -0.88
SMARCA2-241ENST00000635397 DPYDQ12882 1025 aa9.57□□□□□ -0.88
SMARCA2-241ENST00000635397 B4GALNT3Q6L9W6 998 aa9.57□□□□□ -0.88
SMARCA2-241ENST00000635397 EHBP1Q8NDI1 1231 aa9.57□□□□□ -0.88
SMARCA2-241ENST00000635397 SIRT1Q96EB6 747 aa9.57□□□□□ -0.88
SMARCA2-241ENST00000635397 USP4Q13107 963 aa9.56□□□□□ -0.88
SMARCA2-241ENST00000635397 LARGE2Q8N3Y3 721 aa9.56□□□□□ -0.88
SMARCA2-241ENST00000635397 ARID5BQ14865 1188 aa9.55□□□□□ -0.88
SMARCA2-241ENST00000635397 RC3H1Q5TC82 1133 aaKnown RBP9.55□□□□□ -0.88
SMARCA2-241ENST00000635397 RBM19Q9Y4C8 960 aaKnown RBP9.55□□□□□ -0.88
SMARCA2-241ENST00000635397 MAP4K5Q9Y4K4 846 aa9.55□□□□□ -0.88
SMARCA2-241ENST00000635397 ZBTB7BO15156 539 aaPredicted RBP9.54□□□□□ -0.88
SMARCA2-241ENST00000635397 PSME1Q06323 249 aa9.54□□□□□ -0.88
SMARCA2-241ENST00000635397 INTS6LQ5JSJ4 861 aaKnown RBP9.54□□□□□ -0.88
SMARCA2-241ENST00000635397 KIAA1024Q9UPX6 916 aa9.54□□□□□ -0.88
SMARCA2-241ENST00000635397 TMCO4Q5TGY1 634 aa9.53□□□□□ -0.88
SMARCA2-241ENST00000635397 CCDC102BQ68D86 513 aa9.53□□□□□ -0.88
SMARCA2-241ENST00000635397 LIAT1Q6ZQX7 453 aa9.53□□□□□ -0.88
SMARCA2-241ENST00000635397 SIX5Q8N196 739 aa9.53□□□□□ -0.88
SMARCA2-241ENST00000635397 IVNS1ABPQ9Y6Y0 642 aa9.53□□□□□ -0.88
SMARCA2-241ENST00000635397 ERVH48-1M5A8F1 160 aa9.52□□□□□ -0.89
SMARCA2-241ENST00000635397 MYCP01106 439 aaPredicted RBP9.52□□□□□ -0.89
SMARCA2-241ENST00000635397 CLP1Q92989 425 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms