RNA–Protein interactions for RNA: ENST00000635397.1

SMARCA2-241, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 4

Gene SMARCA2, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-241ENST00000635397 AEBP2Q6ZN18 517 aaPredicted RBP23.3■■□□□ 1.32
SMARCA2-241ENST00000635397 CHIC1Q5VXU3 224 aa23.26■■□□□ 1.31
SMARCA2-241ENST00000635397 PHF23Q9BUL5 403 aaPredicted RBP20.51■□□□□ 0.87
SMARCA2-241ENST00000635397 SENP3Q9H4L4 574 aaPredicted RBP19.7■□□□□ 0.74
SMARCA2-241ENST00000635397 PLPPR3Q6T4P5 718 aa19.13■□□□□ 0.65
SMARCA2-241ENST00000635397 FOXD1Q16676 465 aa18.21■□□□□ 0.51
SMARCA2-241ENST00000635397 ADRA2BP18089 450 aa17.97■□□□□ 0.47
SMARCA2-241ENST00000635397 PPP6R1Q9UPN7 881 aa17.93■□□□□ 0.46
SMARCA2-241ENST00000635397 PIAS4Q8N2W9 510 aaPredicted RBP17.33■□□□□ 0.36
SMARCA2-241ENST00000635397 KCNA4P22459 653 aa17.12■□□□□ 0.33
SMARCA2-241ENST00000635397 PPP4R3CPQ6ZMV5 832 aa16.93■□□□□ 0.3
SMARCA2-241ENST00000635397 NCBP3Q53F19 620 aaKnown RBP16.64■□□□□ 0.25
SMARCA2-241ENST00000635397 MSH5O43196 834 aa16.6■□□□□ 0.25
SMARCA2-241ENST00000635397 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
SMARCA2-241ENST00000635397 SCAF1Q9H7N4 1312 aaKnown RBP16.44■□□□□ 0.22
SMARCA2-241ENST00000635397 SLC4A1APQ9BWU0 796 aaKnown RBP16.41■□□□□ 0.22
SMARCA2-241ENST00000635397 NPM3O75607 178 aaKnown RBP16.38■□□□□ 0.21
SMARCA2-241ENST00000635397 CNKSR2Q8WXI2 1034 aa16.33■□□□□ 0.2
SMARCA2-241ENST00000635397 MAPK8IP2Q13387 824 aaPredicted RBP16.15■□□□□ 0.18
SMARCA2-241ENST00000635397 CSRNP3Q8WYN3 585 aa16.09■□□□□ 0.17
SMARCA2-241ENST00000635397 RNF216Q9NWF9 866 aaPredicted RBP15.88■□□□□ 0.13
SMARCA2-241ENST00000635397 DMRT2Q9Y5R5 561 aa15.8■□□□□ 0.12
SMARCA2-241ENST00000635397 DNAJC5BQ9UF47 199 aa15.77■□□□□ 0.12
SMARCA2-241ENST00000635397 ZBTB22O15209 634 aa15.74■□□□□ 0.11
SMARCA2-241ENST00000635397 HOXD11P31277 338 aaPredicted RBP15.67■□□□□ 0.1
SMARCA2-241ENST00000635397 FOXD4L1Q9NU39 408 aa15.61■□□□□ 0.09
SMARCA2-241ENST00000635397 SLC4A2P04920 1241 aa15.33■□□□□ 0.04
SMARCA2-241ENST00000635397 DCAF8L1A6NGE4 600 aa15.15■□□□□ 0.02
SMARCA2-241ENST00000635397 MYCNP04198 464 aaPredicted RBP15.14■□□□□ 0.01
SMARCA2-241ENST00000635397 ATXN8OSP0DMR3 200 aa15□□□□□ -0.01
SMARCA2-241ENST00000635397 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.98□□□□□ -0.01
SMARCA2-241ENST00000635397 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.76□□□□□ -0.05
SMARCA2-241ENST00000635397 HNRNPUL2Q1KMD3 747 aaKnown RBP14.76□□□□□ -0.05
SMARCA2-241ENST00000635397 U3KPZ7 1027 aaPredicted RBP14.76□□□□□ -0.05
SMARCA2-241ENST00000635397 SAMD1Q6SPF0 538 aaPredicted RBP14.73□□□□□ -0.05
SMARCA2-241ENST00000635397 ATF5Q9Y2D1 282 aaPredicted RBP14.68□□□□□ -0.06
SMARCA2-241ENST00000635397 FKBP8Q14318 412 aa14.54□□□□□ -0.08
SMARCA2-241ENST00000635397 APLP2Q06481 763 aa14.5□□□□□ -0.09
SMARCA2-241ENST00000635397 ZNF219Q9P2Y4 722 aaPredicted RBP14.4□□□□□ -0.1
SMARCA2-241ENST00000635397 RNF39Q9H2S5 420 aa14.26□□□□□ -0.13
SMARCA2-241ENST00000635397 TRHP20396 242 aaPredicted RBP14.22□□□□□ -0.13
SMARCA2-241ENST00000635397 POTEDQ86YR6 584 aa14.21□□□□□ -0.13
SMARCA2-241ENST00000635397 SPINK5Q9NQ38 1064 aaPredicted RBP14.21□□□□□ -0.13
SMARCA2-241ENST00000635397 CAPN15O75808 1086 aa14.15□□□□□ -0.14
SMARCA2-241ENST00000635397 AMER1Q5JTC6 1135 aaPredicted RBP14.15□□□□□ -0.14
SMARCA2-241ENST00000635397 C1QBPQ07021 282 aaKnown RBP14.13□□□□□ -0.15
SMARCA2-241ENST00000635397 RTN4Q9NQC3 1192 aaKnown RBP14.12□□□□□ -0.15
SMARCA2-241ENST00000635397 POLA2Q14181 598 aa14.08□□□□□ -0.16
SMARCA2-241ENST00000635397 MKRN4PQ13434 485 aaPredicted RBP14.07□□□□□ -0.16
SMARCA2-241ENST00000635397 FBLN2P98095 1184 aa14.06□□□□□ -0.16
SMARCA2-241ENST00000635397 SPDYE4A6NLX3 237 aa14.02□□□□□ -0.17
SMARCA2-241ENST00000635397 ABCB7O75027 752 aa13.92□□□□□ -0.18
SMARCA2-241ENST00000635397 ZBTB12Q9Y330 459 aaPredicted RBP13.88□□□□□ -0.19
SMARCA2-241ENST00000635397 FBXO3Q9UK99 471 aa13.87□□□□□ -0.19
SMARCA2-241ENST00000635397 PROM2Q8N271 834 aa13.82□□□□□ -0.2
SMARCA2-241ENST00000635397 DSG3P32926 999 aa13.76□□□□□ -0.21
SMARCA2-241ENST00000635397 VASPP50552 380 aaPredicted RBP13.66□□□□□ -0.22
SMARCA2-241ENST00000635397 SLC24A1O60721 1099 aa13.61□□□□□ -0.23
SMARCA2-241ENST00000635397 ZNF692Q9BU19 519 aaPredicted RBP13.59□□□□□ -0.23
SMARCA2-241ENST00000635397 OSCARQ8IYS5 282 aa13.58□□□□□ -0.24
SMARCA2-241ENST00000635397 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
SMARCA2-241ENST00000635397 SPDYE2BA6NHP3 402 aa13.54□□□□□ -0.24
SMARCA2-241ENST00000635397 SPDYE6P0CI01 402 aa13.54□□□□□ -0.24
SMARCA2-241ENST00000635397 SPDYE2Q495Y8 402 aa13.54□□□□□ -0.24
SMARCA2-241ENST00000635397 IFNLR1Q8IU57 520 aaPredicted RBP13.51□□□□□ -0.25
SMARCA2-241ENST00000635397 SSUH2Q9Y2M2 353 aa13.48□□□□□ -0.25
SMARCA2-241ENST00000635397 PABPN1Q86U42 306 aaKnown RBP eCLIP13.43□□□□□ -0.26
SMARCA2-241ENST00000635397 STAG3Q9UJ98 1225 aa13.41□□□□□ -0.26
SMARCA2-241ENST00000635397 KLHL34Q8N239 644 aa13.35□□□□□ -0.27
SMARCA2-241ENST00000635397 PLCD3Q8N3E9 789 aa13.3□□□□□ -0.28
SMARCA2-241ENST00000635397 SPOCK2Q92563 424 aa13.28□□□□□ -0.28
SMARCA2-241ENST00000635397 MIER1Q8N108 512 aa13.26□□□□□ -0.29
SMARCA2-241ENST00000635397 PKD2Q13563 968 aa13.25□□□□□ -0.29
SMARCA2-241ENST00000635397 DCAF8L2P0C7V8 631 aa13.23□□□□□ -0.29
SMARCA2-241ENST00000635397 PLEKHG5O94827 1062 aa13.16□□□□□ -0.3
SMARCA2-241ENST00000635397 ECM2O94769 699 aaPredicted RBP13.11□□□□□ -0.31
SMARCA2-241ENST00000635397 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
SMARCA2-241ENST00000635397 ZBTB47Q9UFB7 747 aaPredicted RBP13.1□□□□□ -0.31
SMARCA2-241ENST00000635397 PLCB2Q00722 1185 aa13.07□□□□□ -0.32
SMARCA2-241ENST00000635397 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
SMARCA2-241ENST00000635397 SPDYE1Q8NFV5 336 aaPredicted RBP13.03□□□□□ -0.32
SMARCA2-241ENST00000635397 CIZ1Q9ULV3 898 aaPredicted RBP13.01□□□□□ -0.33
SMARCA2-241ENST00000635397 CLEC11AQ9Y240 323 aa12.98□□□□□ -0.33
SMARCA2-241ENST00000635397 RGL2O15211 777 aa12.95□□□□□ -0.34
SMARCA2-241ENST00000635397 REM2Q8IYK8 340 aaPredicted RBP12.93□□□□□ -0.34
SMARCA2-241ENST00000635397 PRR29P0C7W0 189 aa12.92□□□□□ -0.34
SMARCA2-241ENST00000635397 HAP1P54257 671 aaPredicted RBP12.92□□□□□ -0.34
SMARCA2-241ENST00000635397 BBXQ8WY36 941 aaPredicted RBP12.88□□□□□ -0.35
SMARCA2-241ENST00000635397 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.88□□□□□ -0.35
SMARCA2-241ENST00000635397 NPM1P06748 294 aaKnown RBP eCLIP12.87□□□□□ -0.35
SMARCA2-241ENST00000635397 TRIM41Q8WV44 630 aa12.87□□□□□ -0.35
SMARCA2-241ENST00000635397 GSE1Q14687 1217 aa12.85□□□□□ -0.35
SMARCA2-241ENST00000635397 CREBZFQ9NS37 354 aa12.85□□□□□ -0.35
SMARCA2-241ENST00000635397 NUBP1P53384 320 aa12.84□□□□□ -0.35
SMARCA2-241ENST00000635397 DCAF8Q5TAQ9 597 aa12.81□□□□□ -0.36
SMARCA2-241ENST00000635397 PAXIP1Q6ZW49 1069 aaPredicted RBP12.78□□□□□ -0.36
SMARCA2-241ENST00000635397 PITPNM1O00562 1244 aa12.77□□□□□ -0.37
SMARCA2-241ENST00000635397 CHGAP10645 457 aaKnown RBP12.77□□□□□ -0.37
SMARCA2-241ENST00000635397 MNX1P50219 401 aaPredicted RBP12.76□□□□□ -0.37
SMARCA2-241ENST00000635397 CFAP44Q96MT7 982 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms