RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 KIAA0232Q92628 1395 aa19.43■□□□□ 0.7
LINC00339-208ENST00000634934 BCL9LQ86UU0 1499 aa19.43■□□□□ 0.7
LINC00339-208ENST00000634934 COL14A1Q05707 1796 aaKnown RBP19.42■□□□□ 0.7
LINC00339-208ENST00000634934 FNBP4Q8N3X1 1017 aaPredicted RBP19.42■□□□□ 0.7
LINC00339-208ENST00000634934 PRDM11Q9NQV5 511 aa19.42■□□□□ 0.7
LINC00339-208ENST00000634934 USP21Q9UK80 565 aa19.42■□□□□ 0.7
LINC00339-208ENST00000634934 SLIT2O94813 1529 aa19.42■□□□□ 0.7
LINC00339-208ENST00000634934 CHRNA2Q15822 529 aa19.41■□□□□ 0.7
LINC00339-208ENST00000634934 ZNF772Q68DY9 489 aaPredicted RBP19.41■□□□□ 0.7
LINC00339-208ENST00000634934 NWD2Q9ULI1 1742 aa19.4■□□□□ 0.7
LINC00339-208ENST00000634934 MAP2P11137 1827 aaKnown RBP19.4■□□□□ 0.7
LINC00339-208ENST00000634934 CPDO75976 1380 aa19.4■□□□□ 0.7
LINC00339-208ENST00000634934 CFAP53Q96M91 514 aa19.4■□□□□ 0.7
LINC00339-208ENST00000634934 NRAPQ86VF7 1730 aa19.39■□□□□ 0.69
LINC00339-208ENST00000634934 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.39■□□□□ 0.69
LINC00339-208ENST00000634934 HOXC9P31274 260 aa19.39■□□□□ 0.69
LINC00339-208ENST00000634934 SMG6Q86US8 1419 aaKnown RBP19.38■□□□□ 0.69
LINC00339-208ENST00000634934 FLT4P35916 1363 aa19.38■□□□□ 0.69
LINC00339-208ENST00000634934 CCDC184Q52MB2 194 aa19.38■□□□□ 0.69
LINC00339-208ENST00000634934 HSP90AB2PQ58FF8 381 aa19.38■□□□□ 0.69
LINC00339-208ENST00000634934 IP6K1Q92551 441 aa19.38■□□□□ 0.69
LINC00339-208ENST00000634934 MRS2Q9HD23 443 aa19.38■□□□□ 0.69
LINC00339-208ENST00000634934 QTRT2Q9H974 415 aaKnown RBP19.37■□□□□ 0.69
LINC00339-208ENST00000634934 BTG4Q9NY30 223 aa19.37■□□□□ 0.69
LINC00339-208ENST00000634934 RTL1A6NKG5 1358 aa19.37■□□□□ 0.69
LINC00339-208ENST00000634934 KIF24Q5T7B8 1368 aa19.37■□□□□ 0.69
LINC00339-208ENST00000634934 LMO7Q8WWI1 1683 aa19.37■□□□□ 0.69
LINC00339-208ENST00000634934 CCER2I3L3R5 266 aa19.36■□□□□ 0.69
LINC00339-208ENST00000634934 LTN1O94822 1766 aa19.36■□□□□ 0.69
LINC00339-208ENST00000634934 LTV1Q96GA3 475 aaPredicted RBP19.35■□□□□ 0.69
LINC00339-208ENST00000634934 AXIN2Q9Y2T1 843 aa19.35■□□□□ 0.69
LINC00339-208ENST00000634934 PEAK1Q9H792 1746 aa19.35■□□□□ 0.69
LINC00339-208ENST00000634934 CDK12Q9NYV4 1490 aaPredicted RBP19.35■□□□□ 0.69
LINC00339-208ENST00000634934 UNC5CLQ8IV45 518 aa19.35■□□□□ 0.69
LINC00339-208ENST00000634934 ATRNO75882 1429 aa19.34■□□□□ 0.69
LINC00339-208ENST00000634934 CAMTA1Q9Y6Y1 1673 aa19.34■□□□□ 0.69
LINC00339-208ENST00000634934 COL18A1P39060 1754 aa19.34■□□□□ 0.69
LINC00339-208ENST00000634934 RGPD5Q99666 1765 aa19.34■□□□□ 0.69
LINC00339-208ENST00000634934 DIAPH1O60610 1272 aaKnown RBP19.33■□□□□ 0.68
LINC00339-208ENST00000634934 TRPC5Q9UL62 973 aaPredicted RBP19.33■□□□□ 0.68
LINC00339-208ENST00000634934 INSRP06213 1382 aa19.33■□□□□ 0.68
LINC00339-208ENST00000634934 BLMP54132 1417 aaPredicted RBP19.31■□□□□ 0.68
LINC00339-208ENST00000634934 EIF4A2Q14240 407 aaKnown RBP19.31■□□□□ 0.68
LINC00339-208ENST00000634934 GLI3P10071 1580 aa19.31■□□□□ 0.68
LINC00339-208ENST00000634934 RXRBP28702 533 aa19.3■□□□□ 0.68
LINC00339-208ENST00000634934 ANKRD24Q8TF21 1146 aa19.3■□□□□ 0.68
LINC00339-208ENST00000634934 U2SURPO15042 1029 aaKnown RBP19.3■□□□□ 0.68
LINC00339-208ENST00000634934 CSB-PGBD3P0DP91 1061 aa19.3■□□□□ 0.68
LINC00339-208ENST00000634934 EVA1CP58658 441 aa19.3■□□□□ 0.68
LINC00339-208ENST00000634934 STRN4Q9NRL3 753 aa19.3■□□□□ 0.68
LINC00339-208ENST00000634934 NUDCQ9Y266 331 aa19.3■□□□□ 0.68
LINC00339-208ENST00000634934 COL3A1P02461 1466 aaPredicted RBP19.3■□□□□ 0.68
LINC00339-208ENST00000634934 ABCC6O95255 1503 aa19.29■□□□□ 0.68
LINC00339-208ENST00000634934 IL13P35225 146 aa19.29■□□□□ 0.68
LINC00339-208ENST00000634934 RBM6P78332 1123 aaKnown RBP19.28■□□□□ 0.68
LINC00339-208ENST00000634934 CCDC9Q9Y3X0 531 aaKnown RBP19.28■□□□□ 0.68
LINC00339-208ENST00000634934 ERBB3P21860 1342 aa19.28■□□□□ 0.68
LINC00339-208ENST00000634934 COL5A2P05997 1499 aaPredicted RBP19.27■□□□□ 0.68
LINC00339-208ENST00000634934 WDR43Q15061 677 aaKnown RBP eCLIP19.27■□□□□ 0.68
LINC00339-208ENST00000634934 VPS72Q15906 364 aa19.27■□□□□ 0.68
LINC00339-208ENST00000634934 GJD4Q96KN9 370 aaPredicted RBP19.27■□□□□ 0.68
LINC00339-208ENST00000634934 RGS12O14924 1447 aa19.26■□□□□ 0.67
LINC00339-208ENST00000634934 U2AF1L5P0DN76 240 aaPredicted RBP19.25■□□□□ 0.67
LINC00339-208ENST00000634934 U2AF1Q01081 240 aaKnown RBP eCLIP19.25■□□□□ 0.67
LINC00339-208ENST00000634934 PNISRQ8TF01 805 aaKnown RBP19.25■□□□□ 0.67
LINC00339-208ENST00000634934 NLRP2Q9NX02 1062 aa19.25■□□□□ 0.67
LINC00339-208ENST00000634934 LARP1Q6PKG0 1096 aaKnown RBP19.25■□□□□ 0.67
LINC00339-208ENST00000634934 FAM9BQ8IZU0 186 aa19.25■□□□□ 0.67
LINC00339-208ENST00000634934 YTHDC1Q96MU7 727 aaKnown RBP19.25■□□□□ 0.67
LINC00339-208ENST00000634934 TOM1L2Q6ZVM7 507 aa19.24■□□□□ 0.67
LINC00339-208ENST00000634934 EYA1Q99502 592 aa19.24■□□□□ 0.67
LINC00339-208ENST00000634934 WDR17Q8IZU2 1322 aa19.24■□□□□ 0.67
LINC00339-208ENST00000634934 NBPF6Q5VWK0 638 aa19.23■□□□□ 0.67
LINC00339-208ENST00000634934 USHBP1Q8N6Y0 703 aa19.23■□□□□ 0.67
LINC00339-208ENST00000634934 NBPF4Q96M43 638 aa19.23■□□□□ 0.67
LINC00339-208ENST00000634934 USP35Q9P2H5 1018 aa19.22■□□□□ 0.67
LINC00339-208ENST00000634934 SPATA31A5Q5VU36 1347 aa19.22■□□□□ 0.67
LINC00339-208ENST00000634934 SPATA31A7Q8IWB4 1347 aa19.22■□□□□ 0.67
LINC00339-208ENST00000634934 HMOX1P09601 288 aa19.21■□□□□ 0.67
LINC00339-208ENST00000634934 ADAMTS8Q9UP79 889 aa19.21■□□□□ 0.67
LINC00339-208ENST00000634934 SULT6B1Q6IMI4 303 aa19.2■□□□□ 0.66
LINC00339-208ENST00000634934 SPATA31A1Q5TZJ5 1347 aa19.2■□□□□ 0.66
LINC00339-208ENST00000634934 FAM98CQ17RN3 349 aaKnown RBP19.2■□□□□ 0.66
LINC00339-208ENST00000634934 IGSF1Q8N6C5 1336 aa19.2■□□□□ 0.66
LINC00339-208ENST00000634934 BRWD3Q6RI45 1802 aa19.19■□□□□ 0.66
LINC00339-208ENST00000634934 AEBP1Q8IUX7 1158 aa19.19■□□□□ 0.66
LINC00339-208ENST00000634934 CRB1P82279 1406 aa19.18■□□□□ 0.66
LINC00339-208ENST00000634934 CARD10Q9BWT7 1032 aa19.18■□□□□ 0.66
LINC00339-208ENST00000634934 RGPD2P0DJD1 1756 aa19.16■□□□□ 0.66
LINC00339-208ENST00000634934 THSD7AQ9UPZ6 1657 aa19.16■□□□□ 0.66
LINC00339-208ENST00000634934 FCHSD2O94868 740 aa19.15■□□□□ 0.66
LINC00339-208ENST00000634934 CCDC146Q8IYE0 955 aa19.15■□□□□ 0.66
LINC00339-208ENST00000634934 SEPT12Q8IYM1 358 aa19.15■□□□□ 0.66
LINC00339-208ENST00000634934 EP400Q96L91 3159 aa19.15■□□□□ 0.66
LINC00339-208ENST00000634934 WNK3Q9BYP7 1800 aa19.15■□□□□ 0.66
LINC00339-208ENST00000634934 A0A0G2JS52 829 aa19.15■□□□□ 0.66
LINC00339-208ENST00000634934 PRKAR2BP31323 418 aa19.15■□□□□ 0.66
LINC00339-208ENST00000634934 MYT1Q01538 1121 aa19.15■□□□□ 0.66
LINC00339-208ENST00000634934 RSPH6AQ9H0K4 717 aa19.15■□□□□ 0.66
LINC00339-208ENST00000634934 RGPD1P0DJD0 1748 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms