RNA–Protein interactions for RNA: ENST00000630951.1

RAB28-208, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB28, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-208ENST00000630951 THRAP3Q9Y2W1 955 aaKnown RBP29.85■■■□□ 2.37
RAB28-208ENST00000630951 AXIN2Q9Y2T1 843 aa29.85■■■□□ 2.37
RAB28-208ENST00000630951 COL18A1P39060 1754 aa29.84■■■□□ 2.37
RAB28-208ENST00000630951 CRB1P82279 1406 aa29.82■■■□□ 2.36
RAB28-208ENST00000630951 BLMP54132 1417 aaPredicted RBP29.82■■■□□ 2.36
RAB28-208ENST00000630951 OVOS2A0A0J9YW53 1432 aa29.8■■■□□ 2.36
RAB28-208ENST00000630951 OVOS2Q6IE36 1432 aa29.8■■■□□ 2.36
RAB28-208ENST00000630951 EIF4G2P78344 907 aaKnown RBP eCLIP29.79■■■□□ 2.36
RAB28-208ENST00000630951 ABCC6O95255 1503 aa29.79■■■□□ 2.36
RAB28-208ENST00000630951 WDR17Q8IZU2 1322 aa29.79■■■□□ 2.36
RAB28-208ENST00000630951 TOM1L2Q6ZVM7 507 aa29.77■■■□□ 2.36
RAB28-208ENST00000630951 COG3Q96JB2 828 aa29.75■■■□□ 2.35
RAB28-208ENST00000630951 SF3B2Q13435 895 aaKnown RBP29.74■■■□□ 2.35
RAB28-208ENST00000630951 HSPA5P11021 654 aaKnown RBP29.72■■■□□ 2.35
RAB28-208ENST00000630951 PDE3BQ13370 1112 aa29.72■■■□□ 2.35
RAB28-208ENST00000630951 FAM182BQ5T319 152 aa29.72■■■□□ 2.35
RAB28-208ENST00000630951 CSB-PGBD3P0DP91 1061 aa29.71■■■□□ 2.35
RAB28-208ENST00000630951 FYB1O15117 783 aa29.7■■■□□ 2.35
RAB28-208ENST00000630951 FAM196AQ6ZSG2 479 aa29.7■■■□□ 2.35
RAB28-208ENST00000630951 CARD10Q9BWT7 1032 aa29.7■■■□□ 2.35
RAB28-208ENST00000630951 RGPD5Q99666 1765 aa29.7■■■□□ 2.35
RAB28-208ENST00000630951 LTN1O94822 1766 aa29.68■■■□□ 2.34
RAB28-208ENST00000630951 MYOM1P52179 1685 aa29.67■■■□□ 2.34
RAB28-208ENST00000630951 CDCA7Q9BWT1 371 aaPredicted RBP29.67■■■□□ 2.34
RAB28-208ENST00000630951 ERBB3P21860 1342 aa29.67■■■□□ 2.34
RAB28-208ENST00000630951 PARP4Q9UKK3 1724 aaKnown RBP29.66■■■□□ 2.34
RAB28-208ENST00000630951 CARD14Q9BXL6 1004 aa29.66■■■□□ 2.34
RAB28-208ENST00000630951 DEFB132Q7Z7B7 95 aa29.65■■■□□ 2.34
RAB28-208ENST00000630951 IP6K1Q92551 441 aa29.64■■■□□ 2.34
RAB28-208ENST00000630951 GGNBP2Q9H3C7 697 aa29.64■■■□□ 2.34
RAB28-208ENST00000630951 CCDC7Q96M83 1385 aa29.64■■■□□ 2.34
RAB28-208ENST00000630951 BAG6P46379 1132 aa29.62■■■□□ 2.33
RAB28-208ENST00000630951 DDB1Q16531 1140 aa29.62■■■□□ 2.33
RAB28-208ENST00000630951 C11orf95C9JLR9 678 aaPredicted RBP29.61■■■□□ 2.33
RAB28-208ENST00000630951 MAP3K19Q56UN5 1328 aa29.61■■■□□ 2.33
RAB28-208ENST00000630951 ANKRD24Q8TF21 1146 aa29.6■■■□□ 2.33
RAB28-208ENST00000630951 NSD3Q9BZ95 1437 aa29.6■■■□□ 2.33
RAB28-208ENST00000630951 POLR3GLQ9BT43 218 aa29.6■■■□□ 2.33
RAB28-208ENST00000630951 RGPD1P0DJD0 1748 aa29.59■■■□□ 2.33
RAB28-208ENST00000630951 NLRP2Q9NX02 1062 aa29.59■■■□□ 2.33
RAB28-208ENST00000630951 FBLN1P23142 703 aa29.58■■■□□ 2.33
RAB28-208ENST00000630951 DISP2A7MBM2 1401 aa29.58■■■□□ 2.33
RAB28-208ENST00000630951 AMPHP49418 695 aa29.57■■■□□ 2.32
RAB28-208ENST00000630951 TRIM37O94972 964 aa29.56■■■□□ 2.32
RAB28-208ENST00000630951 LRRC37A3O60309 1634 aa29.56■■■□□ 2.32
RAB28-208ENST00000630951 HOXC9P31274 260 aa29.56■■■□□ 2.32
RAB28-208ENST00000630951 WNK3Q9BYP7 1800 aa29.56■■■□□ 2.32
RAB28-208ENST00000630951 KIF20BQ96Q89 1820 aa29.55■■■□□ 2.32
RAB28-208ENST00000630951 CGNL1Q0VF96 1302 aa29.54■■■□□ 2.32
RAB28-208ENST00000630951 RTL1A6NKG5 1358 aa29.54■■■□□ 2.32
RAB28-208ENST00000630951 OVOS2A0A0G2JMS6 1433 aa29.54■■■□□ 2.32
RAB28-208ENST00000630951 EXOC5O00471 708 aa29.53■■■□□ 2.32
RAB28-208ENST00000630951 RRS1Q15050 365 aaKnown RBP29.53■■■□□ 2.32
RAB28-208ENST00000630951 EN1Q05925 392 aaPredicted RBP29.51■■■□□ 2.31
RAB28-208ENST00000630951 TNS1Q9HBL0 1735 aaKnown RBP29.51■■■□□ 2.31
RAB28-208ENST00000630951 IL2RBP14784 551 aa29.5■■■□□ 2.31
RAB28-208ENST00000630951 LTV1Q96GA3 475 aaPredicted RBP29.5■■■□□ 2.31
RAB28-208ENST00000630951 KIF24Q5T7B8 1368 aa29.49■■■□□ 2.31
RAB28-208ENST00000630951 MARCH10Q8NA82 808 aaPredicted RBP29.49■■■□□ 2.31
RAB28-208ENST00000630951 PEAK1Q9H792 1746 aa29.49■■■□□ 2.31
RAB28-208ENST00000630951 BCL9O00512 1426 aa29.48■■■□□ 2.31
RAB28-208ENST00000630951 FAM208AQ9UK61 1670 aaKnown RBP29.47■■■□□ 2.31
RAB28-208ENST00000630951 APBA3O96018 575 aa29.47■■■□□ 2.31
RAB28-208ENST00000630951 PANK3Q9H999 370 aa29.47■■■□□ 2.31
RAB28-208ENST00000630951 TNS2Q63HR2 1409 aa29.46■■■□□ 2.31
RAB28-208ENST00000630951 CAMKK2Q96RR4 588 aa29.44■■■□□ 2.3
RAB28-208ENST00000630951 FLT4P35916 1363 aa29.44■■■□□ 2.3
RAB28-208ENST00000630951 PARD3Q8TEW0 1356 aa29.44■■■□□ 2.3
RAB28-208ENST00000630951 EZH2Q15910 746 aaKnown RBP29.42■■■□□ 2.3
RAB28-208ENST00000630951 INSRP06213 1382 aa29.42■■■□□ 2.3
RAB28-208ENST00000630951 HSP90AB2PQ58FF8 381 aa29.41■■■□□ 2.3
RAB28-208ENST00000630951 BCL11BQ9C0K0 894 aaPredicted RBP29.4■■■□□ 2.3
RAB28-208ENST00000630951 SMG6Q86US8 1419 aaKnown RBP29.4■■■□□ 2.3
RAB28-208ENST00000630951 KIF7Q2M1P5 1343 aa29.39■■■□□ 2.3
RAB28-208ENST00000630951 SRCAPQ6ZRS2 3230 aa29.39■■■□□ 2.3
RAB28-208ENST00000630951 EMILIN1Q9Y6C2 1016 aa29.38■■■□□ 2.29
RAB28-208ENST00000630951 SBF2Q86WG5 1849 aa29.38■■■□□ 2.29
RAB28-208ENST00000630951 NBPF6Q5VWK0 638 aa29.37■■■□□ 2.29
RAB28-208ENST00000630951 NBPF4Q96M43 638 aa29.37■■■□□ 2.29
RAB28-208ENST00000630951 NSD2O96028 1365 aa29.36■■■□□ 2.29
RAB28-208ENST00000630951 PLSCR1O15162 318 aa29.34■■■□□ 2.29
RAB28-208ENST00000630951 POLKQ9UBT6 870 aa29.34■■■□□ 2.29
RAB28-208ENST00000630951 ANKRD26Q9UPS8 1709 aa29.33■■■□□ 2.29
RAB28-208ENST00000630951 PPM1GO15355 546 aaPredicted RBP29.33■■■□□ 2.29
RAB28-208ENST00000630951 KNSTRNQ9Y448 316 aa29.33■■■□□ 2.29
RAB28-208ENST00000630951 WASHC2AQ641Q2 1341 aa29.33■■■□□ 2.29
RAB28-208ENST00000630951 RGPD2P0DJD1 1756 aa29.32■■■□□ 2.28
RAB28-208ENST00000630951 PTF1AQ7RTS3 328 aa29.32■■■□□ 2.28
RAB28-208ENST00000630951 MAP2P11137 1827 aaKnown RBP29.3■■■□□ 2.28
RAB28-208ENST00000630951 TNNT2P45379 298 aaPredicted RBP29.28■■■□□ 2.28
RAB28-208ENST00000630951 ZCRB1Q8TBF4 217 aaKnown RBP29.28■■■□□ 2.28
RAB28-208ENST00000630951 MEGF6O75095 1541 aa29.28■■■□□ 2.28
RAB28-208ENST00000630951 USHBP1Q8N6Y0 703 aa29.28■■■□□ 2.28
RAB28-208ENST00000630951 DDX54Q8TDD1 881 aaKnown RBP29.28■■■□□ 2.28
RAB28-208ENST00000630951 RAPGEF4Q8WZA2 1011 aa29.28■■■□□ 2.28
RAB28-208ENST00000630951 RREB1Q92766 1687 aa29.27■■■□□ 2.28
RAB28-208ENST00000630951 RGPD3A6NKT7 1758 aaPredicted RBP29.27■■■□□ 2.28
RAB28-208ENST00000630951 RGPD4Q7Z3J3 1758 aa29.27■■■□□ 2.28
RAB28-208ENST00000630951 KCNQ2O43526 872 aa29.26■■■□□ 2.27
RAB28-208ENST00000630951 PSDA5PKW4 1024 aaPredicted RBP29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms