RNA–Protein interactions for RNA: ENST00000629350.2

CDK7-215, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-215ENST00000629350 SPATA31A7Q8IWB4 1347 aa20.38■□□□□ 0.85
CDK7-215ENST00000629350 PRR29P0C7W0 189 aa20.38■□□□□ 0.85
CDK7-215ENST00000629350 TNS1Q9HBL0 1735 aaKnown RBP20.38■□□□□ 0.85
CDK7-215ENST00000629350 NFAT5O94916 1531 aa20.37■□□□□ 0.85
CDK7-215ENST00000629350 CPDO75976 1380 aa20.37■□□□□ 0.85
CDK7-215ENST00000629350 ONECUT3O60422 494 aaPredicted RBP20.37■□□□□ 0.85
CDK7-215ENST00000629350 COL5A2P05997 1499 aaPredicted RBP20.36■□□□□ 0.85
CDK7-215ENST00000629350 FAM182BQ5T319 152 aa20.34■□□□□ 0.85
CDK7-215ENST00000629350 SPATA31A1Q5TZJ5 1347 aa20.33■□□□□ 0.85
CDK7-215ENST00000629350 TTC21BQ7Z4L5 1316 aa20.33■□□□□ 0.85
CDK7-215ENST00000629350 TESK2Q96S53 571 aa20.33■□□□□ 0.85
CDK7-215ENST00000629350 STRN4Q9NRL3 753 aa20.33■□□□□ 0.85
CDK7-215ENST00000629350 ZRANB1Q9UGI0 708 aa20.33■□□□□ 0.85
CDK7-215ENST00000629350 LTN1O94822 1766 aa20.32■□□□□ 0.84
CDK7-215ENST00000629350 GCP02774 474 aa20.32■□□□□ 0.84
CDK7-215ENST00000629350 BRD4O60885 1362 aaPredicted RBP20.32■□□□□ 0.84
CDK7-215ENST00000629350 RGPD1P0DJD0 1748 aa20.31■□□□□ 0.84
CDK7-215ENST00000629350 BLMP54132 1417 aaPredicted RBP20.31■□□□□ 0.84
CDK7-215ENST00000629350 LARP1Q6PKG0 1096 aaKnown RBP20.31■□□□□ 0.84
CDK7-215ENST00000629350 LRRC37A3O60309 1634 aa20.31■□□□□ 0.84
CDK7-215ENST00000629350 PARP4Q9UKK3 1724 aaKnown RBP20.3■□□□□ 0.84
CDK7-215ENST00000629350 MYOM1P52179 1685 aa20.3■□□□□ 0.84
CDK7-215ENST00000629350 CHRDL2Q6WN34 429 aa20.3■□□□□ 0.84
CDK7-215ENST00000629350 KRT27Q7Z3Y8 459 aa20.3■□□□□ 0.84
CDK7-215ENST00000629350 KTN1Q86UP2 1357 aaKnown RBP20.3■□□□□ 0.84
CDK7-215ENST00000629350 A0A0G2JS52 829 aa20.29■□□□□ 0.84
CDK7-215ENST00000629350 NLRP6P59044 892 aa20.29■□□□□ 0.84
CDK7-215ENST00000629350 MYT1Q01538 1121 aa20.29■□□□□ 0.84
CDK7-215ENST00000629350 NLRP13Q86W25 1043 aa20.29■□□□□ 0.84
CDK7-215ENST00000629350 ST20-MTHFSA0A0A6YYL1 179 aa20.28■□□□□ 0.84
CDK7-215ENST00000629350 ZBTB7CA1YPR0 619 aa20.28■□□□□ 0.84
CDK7-215ENST00000629350 DEFB132Q7Z7B7 95 aa20.28■□□□□ 0.84
CDK7-215ENST00000629350 A0A1W2PP64 1363 aa20.28■□□□□ 0.84
CDK7-215ENST00000629350 MIER1Q8N108 512 aa20.27■□□□□ 0.84
CDK7-215ENST00000629350 SLC12A5Q9H2X9 1139 aa20.27■□□□□ 0.84
CDK7-215ENST00000629350 USP35Q9P2H5 1018 aa20.27■□□□□ 0.84
CDK7-215ENST00000629350 SOX12O15370 315 aa20.26■□□□□ 0.83
CDK7-215ENST00000629350 PEAK1Q9H792 1746 aa20.26■□□□□ 0.83
CDK7-215ENST00000629350 AATKQ6ZMQ8 1374 aa20.25■□□□□ 0.83
CDK7-215ENST00000629350 USP47Q96K76 1375 aa20.25■□□□□ 0.83
CDK7-215ENST00000629350 NME9Q86XW9 330 aa20.25■□□□□ 0.83
CDK7-215ENST00000629350 PCGF6Q9BYE7 350 aa20.25■□□□□ 0.83
CDK7-215ENST00000629350 AXIN2Q9Y2T1 843 aa20.25■□□□□ 0.83
CDK7-215ENST00000629350 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.24■□□□□ 0.83
CDK7-215ENST00000629350 PLCD3Q8N3E9 789 aa20.24■□□□□ 0.83
CDK7-215ENST00000629350 TTC21AQ8NDW8 1320 aa20.23■□□□□ 0.83
CDK7-215ENST00000629350 OVOS2A0A0J9YW53 1432 aa20.22■□□□□ 0.83
CDK7-215ENST00000629350 OVOS2Q6IE36 1432 aa20.22■□□□□ 0.83
CDK7-215ENST00000629350 TMC1Q8TDI8 760 aa20.22■□□□□ 0.83
CDK7-215ENST00000629350 USP31Q70CQ4 1352 aa20.21■□□□□ 0.83
CDK7-215ENST00000629350 CRB1P82279 1406 aa20.21■□□□□ 0.83
CDK7-215ENST00000629350 EDC4Q6P2E9 1401 aaKnown RBP20.21■□□□□ 0.83
CDK7-215ENST00000629350 SBF2Q86WG5 1849 aa20.21■□□□□ 0.83
CDK7-215ENST00000629350 ARHGEF25Q86VW2 580 aa20.2■□□□□ 0.82
CDK7-215ENST00000629350 IFNLR1Q8IU57 520 aaPredicted RBP20.19■□□□□ 0.82
CDK7-215ENST00000629350 RREB1Q92766 1687 aa20.19■□□□□ 0.82
CDK7-215ENST00000629350 KIF20BQ96Q89 1820 aa20.18■□□□□ 0.82
CDK7-215ENST00000629350 ABCC6O95255 1503 aa20.18■□□□□ 0.82
CDK7-215ENST00000629350 EVA1CP58658 441 aa20.18■□□□□ 0.82
CDK7-215ENST00000629350 RGPD2P0DJD1 1756 aa20.17■□□□□ 0.82
CDK7-215ENST00000629350 BARGINQ6ZT62 677 aa20.17■□□□□ 0.82
CDK7-215ENST00000629350 CCDC125Q86Z20 511 aa20.17■□□□□ 0.82
CDK7-215ENST00000629350 TCP11L2Q8N4U5 519 aa20.17■□□□□ 0.82
CDK7-215ENST00000629350 CREBZFQ9NS37 354 aa20.17■□□□□ 0.82
CDK7-215ENST00000629350 NUP188Q5SRE5 1749 aa20.16■□□□□ 0.82
CDK7-215ENST00000629350 DISP2A7MBM2 1401 aa20.16■□□□□ 0.82
CDK7-215ENST00000629350 WDR17Q8IZU2 1322 aa20.14■□□□□ 0.81
CDK7-215ENST00000629350 FXR2P51116 673 aaKnown RBP eCLIP20.13■□□□□ 0.81
CDK7-215ENST00000629350 CHADLQ6NUI6 762 aa20.13■□□□□ 0.81
CDK7-215ENST00000629350 HDGFL2Q7Z4V5 671 aaPredicted RBP20.12■□□□□ 0.81
CDK7-215ENST00000629350 FAM208AQ9UK61 1670 aaKnown RBP20.11■□□□□ 0.81
CDK7-215ENST00000629350 TRIM37O94972 964 aa20.11■□□□□ 0.81
CDK7-215ENST00000629350 FBLN1P23142 703 aa20.11■□□□□ 0.81
CDK7-215ENST00000629350 EN1Q05925 392 aaPredicted RBP20.11■□□□□ 0.81
CDK7-215ENST00000629350 PUS7Q96PZ0 661 aaKnown RBP20.11■□□□□ 0.81
CDK7-215ENST00000629350 ANKRD36BQ8N2N9 1353 aa20.1■□□□□ 0.81
CDK7-215ENST00000629350 KCNH5Q8NCM2 988 aa20.1■□□□□ 0.81
CDK7-215ENST00000629350 NINLQ9Y2I6 1382 aa20.09■□□□□ 0.81
CDK7-215ENST00000629350 CLSPNQ9HAW4 1339 aa20.09■□□□□ 0.81
CDK7-215ENST00000629350 TOM1L2Q6ZVM7 507 aa20.09■□□□□ 0.81
CDK7-215ENST00000629350 PTF1AQ7RTS3 328 aa20.09■□□□□ 0.81
CDK7-215ENST00000629350 PIP4P2Q8N4L2 257 aa20.09■□□□□ 0.81
CDK7-215ENST00000629350 TERF2IPQ9NYB0 399 aa20.09■□□□□ 0.81
CDK7-215ENST00000629350 SHANK3Q9BYB0 1731 aa20.08■□□□□ 0.81
CDK7-215ENST00000629350 THRAP3Q9Y2W1 955 aaKnown RBP20.08■□□□□ 0.81
CDK7-215ENST00000629350 ERBB3P21860 1342 aa20.06■□□□□ 0.8
CDK7-215ENST00000629350 SF3B2Q13435 895 aaKnown RBP20.06■□□□□ 0.8
CDK7-215ENST00000629350 KLHL34Q8N239 644 aa20.06■□□□□ 0.8
CDK7-215ENST00000629350 OVOS2A0A0G2JMS6 1433 aa20.05■□□□□ 0.8
CDK7-215ENST00000629350 TNS2Q63HR2 1409 aa20.05■□□□□ 0.8
CDK7-215ENST00000629350 PSDA5PKW4 1024 aaPredicted RBP20.05■□□□□ 0.8
CDK7-215ENST00000629350 BAG6P46379 1132 aa20.05■□□□□ 0.8
CDK7-215ENST00000629350 EZH2Q15910 746 aaKnown RBP20.05■□□□□ 0.8
CDK7-215ENST00000629350 RGPD3A6NKT7 1758 aaPredicted RBP20.05■□□□□ 0.8
CDK7-215ENST00000629350 RGPD4Q7Z3J3 1758 aa20.05■□□□□ 0.8
CDK7-215ENST00000629350 PRKAR2AP13861 404 aaKnown RBP20.04■□□□□ 0.8
CDK7-215ENST00000629350 TMF1P82094 1093 aa20.04■□□□□ 0.8
CDK7-215ENST00000629350 PDE3BQ13370 1112 aa20.04■□□□□ 0.8
CDK7-215ENST00000629350 FAM196AQ6ZSG2 479 aa20.04■□□□□ 0.8
CDK7-215ENST00000629350 MARCH10Q8NA82 808 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms