RNA–Protein interactions for RNA: ENST00000629232.1

PARP1-210, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 5 BASIC

Gene PARP1, Length 477 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-210ENST00000629232 NBPF14Q5TI25 921 aa29.29■■■□□ 2.28
PARP1-210ENST00000629232 HDGFL2Q7Z4V5 671 aaPredicted RBP29.29■■■□□ 2.28
PARP1-210ENST00000629232 MON2Q7Z3U7 1717 aa29.28■■■□□ 2.28
PARP1-210ENST00000629232 TERF2IPQ9NYB0 399 aa29.28■■■□□ 2.28
PARP1-210ENST00000629232 NINLQ9Y2I6 1382 aa29.27■■■□□ 2.28
PARP1-210ENST00000629232 KCNH5Q8NCM2 988 aa29.27■■■□□ 2.28
PARP1-210ENST00000629232 LMO7Q8WWI1 1683 aa29.25■■■□□ 2.27
PARP1-210ENST00000629232 C11orf95C9JLR9 678 aaPredicted RBP29.25■■■□□ 2.27
PARP1-210ENST00000629232 TMF1P82094 1093 aa29.24■■■□□ 2.27
PARP1-210ENST00000629232 RREB1Q92766 1687 aa29.24■■■□□ 2.27
PARP1-210ENST00000629232 AATKQ6ZMQ8 1374 aa29.24■■■□□ 2.27
PARP1-210ENST00000629232 USP31Q70CQ4 1352 aa29.23■■■□□ 2.27
PARP1-210ENST00000629232 ARHGEF25Q86VW2 580 aa29.21■■■□□ 2.27
PARP1-210ENST00000629232 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.21■■■□□ 2.27
PARP1-210ENST00000629232 EDC4Q6P2E9 1401 aaKnown RBP29.2■■■□□ 2.27
PARP1-210ENST00000629232 ZBTB7CA1YPR0 619 aa29.2■■■□□ 2.26
PARP1-210ENST00000629232 A0A1W2PP64 1363 aa29.2■■■□□ 2.26
PARP1-210ENST00000629232 NUP188Q5SRE5 1749 aa29.2■■■□□ 2.26
PARP1-210ENST00000629232 COL5A2P05997 1499 aaPredicted RBP29.19■■■□□ 2.26
PARP1-210ENST00000629232 CDCA8Q53HL2 280 aa29.19■■■□□ 2.26
PARP1-210ENST00000629232 PARP4Q9UKK3 1724 aaKnown RBP29.18■■■□□ 2.26
PARP1-210ENST00000629232 CRB1P82279 1406 aa29.18■■■□□ 2.26
PARP1-210ENST00000629232 COL18A1P39060 1754 aa29.16■■■□□ 2.26
PARP1-210ENST00000629232 NME9Q86XW9 330 aa29.16■■■□□ 2.26
PARP1-210ENST00000629232 USP54Q70EL1 1684 aa29.15■■■□□ 2.26
PARP1-210ENST00000629232 PPP1R1BQ9UD71 204 aaPredicted RBP29.15■■■□□ 2.26
PARP1-210ENST00000629232 OVOS2A0A0G2JMS6 1433 aa29.14■■■□□ 2.26
PARP1-210ENST00000629232 OVOS2A0A0J9YW53 1432 aa29.14■■■□□ 2.26
PARP1-210ENST00000629232 OVOS2Q6IE36 1432 aa29.14■■■□□ 2.26
PARP1-210ENST00000629232 AXIN2Q9Y2T1 843 aa29.13■■■□□ 2.25
PARP1-210ENST00000629232 NFAT5O94916 1531 aa29.12■■■□□ 2.25
PARP1-210ENST00000629232 SPON1Q9HCB6 807 aa29.12■■■□□ 2.25
PARP1-210ENST00000629232 ANKRD36BQ8N2N9 1353 aa29.12■■■□□ 2.25
PARP1-210ENST00000629232 DDB1Q16531 1140 aa29.1■■■□□ 2.25
PARP1-210ENST00000629232 TOM1L2Q6ZVM7 507 aa29.1■■■□□ 2.25
PARP1-210ENST00000629232 DCAF8L1A6NGE4 600 aa29.09■■■□□ 2.25
PARP1-210ENST00000629232 SOX12O15370 315 aa29.09■■■□□ 2.25
PARP1-210ENST00000629232 KCNQ2O43526 872 aa29.08■■■□□ 2.25
PARP1-210ENST00000629232 WDR17Q8IZU2 1322 aa29.07■■■□□ 2.24
PARP1-210ENST00000629232 ABCC6O95255 1503 aa29.06■■■□□ 2.24
PARP1-210ENST00000629232 PLSCR1O15162 318 aa29.05■■■□□ 2.24
PARP1-210ENST00000629232 YY1P25490 414 aa29.05■■■□□ 2.24
PARP1-210ENST00000629232 PEAK1Q9H792 1746 aa29.05■■■□□ 2.24
PARP1-210ENST00000629232 LRRC37A3O60309 1634 aa29.05■■■□□ 2.24
PARP1-210ENST00000629232 RGPD3A6NKT7 1758 aaPredicted RBP29.04■■■□□ 2.24
PARP1-210ENST00000629232 RGPD4Q7Z3J3 1758 aa29.04■■■□□ 2.24
PARP1-210ENST00000629232 EIF4G2P78344 907 aaKnown RBP eCLIP29.04■■■□□ 2.24
PARP1-210ENST00000629232 CDCA7Q9BWT1 371 aaPredicted RBP29.04■■■□□ 2.24
PARP1-210ENST00000629232 RGPD5Q99666 1765 aa29.03■■■□□ 2.24
PARP1-210ENST00000629232 BCL11BQ9C0K0 894 aaPredicted RBP29.03■■■□□ 2.24
PARP1-210ENST00000629232 SBF2Q86WG5 1849 aa29.02■■■□□ 2.24
PARP1-210ENST00000629232 COG3Q96JB2 828 aa29.01■■■□□ 2.23
PARP1-210ENST00000629232 CARD10Q9BWT7 1032 aa29.01■■■□□ 2.23
PARP1-210ENST00000629232 FYB1O15117 783 aa28.99■■■□□ 2.23
PARP1-210ENST00000629232 CSB-PGBD3P0DP91 1061 aa28.99■■■□□ 2.23
PARP1-210ENST00000629232 WNK3Q9BYP7 1800 aa28.97■■■□□ 2.23
PARP1-210ENST00000629232 LTN1O94822 1766 aa28.96■■■□□ 2.23
PARP1-210ENST00000629232 HSPA5P11021 654 aaKnown RBP28.96■■■□□ 2.23
PARP1-210ENST00000629232 MARCH10Q8NA82 808 aaPredicted RBP28.95■■■□□ 2.22
PARP1-210ENST00000629232 BCL9O00512 1426 aa28.94■■■□□ 2.22
PARP1-210ENST00000629232 IP6K1Q92551 441 aa28.94■■■□□ 2.22
PARP1-210ENST00000629232 ANO8Q9HCE9 1232 aaPredicted RBP28.94■■■□□ 2.22
PARP1-210ENST00000629232 ERBB3P21860 1342 aa28.94■■■□□ 2.22
PARP1-210ENST00000629232 CARD14Q9BXL6 1004 aa28.93■■■□□ 2.22
PARP1-210ENST00000629232 CCDC7Q96M83 1385 aa28.92■■■□□ 2.22
PARP1-210ENST00000629232 MYOM1P52179 1685 aa28.92■■■□□ 2.22
PARP1-210ENST00000629232 EXOC5O00471 708 aa28.91■■■□□ 2.22
PARP1-210ENST00000629232 PTF1AQ7RTS3 328 aa28.91■■■□□ 2.22
PARP1-210ENST00000629232 GGNBP2Q9H3C7 697 aa28.9■■■□□ 2.22
PARP1-210ENST00000629232 CASZ1Q86V15 1759 aa28.88■■■□□ 2.21
PARP1-210ENST00000629232 ANKRD24Q8TF21 1146 aa28.88■■■□□ 2.21
PARP1-210ENST00000629232 STK32BQ9NY57 414 aa28.88■■■□□ 2.21
PARP1-210ENST00000629232 MAP3K19Q56UN5 1328 aa28.88■■■□□ 2.21
PARP1-210ENST00000629232 PROM2Q8N271 834 aa28.87■■■□□ 2.21
PARP1-210ENST00000629232 FBLN1P23142 703 aa28.86■■■□□ 2.21
PARP1-210ENST00000629232 ZBTB7AO95365 584 aa28.85■■■□□ 2.21
PARP1-210ENST00000629232 TXNRD1Q16881 649 aa28.85■■■□□ 2.21
PARP1-210ENST00000629232 NLRP2Q9NX02 1062 aa28.85■■■□□ 2.21
PARP1-210ENST00000629232 HOXC9P31274 260 aa28.84■■■□□ 2.21
PARP1-210ENST00000629232 AMPHP49418 695 aa28.83■■■□□ 2.21
PARP1-210ENST00000629232 NSD3Q9BZ95 1437 aa28.83■■■□□ 2.21
PARP1-210ENST00000629232 KIF20BQ96Q89 1820 aa28.83■■■□□ 2.21
PARP1-210ENST00000629232 PDGFDQ9GZP0 370 aaPredicted RBP28.82■■■□□ 2.2
PARP1-210ENST00000629232 TNS2Q63HR2 1409 aa28.82■■■□□ 2.2
PARP1-210ENST00000629232 SLC15A2Q16348 729 aa28.81■■■□□ 2.2
PARP1-210ENST00000629232 RTL1A6NKG5 1358 aa28.8■■■□□ 2.2
PARP1-210ENST00000629232 POLR3GLQ9BT43 218 aa28.8■■■□□ 2.2
PARP1-210ENST00000629232 ATF5Q9Y2D1 282 aaPredicted RBP28.8■■■□□ 2.2
PARP1-210ENST00000629232 CGNL1Q0VF96 1302 aa28.79■■■□□ 2.2
PARP1-210ENST00000629232 RRS1Q15050 365 aaKnown RBP28.79■■■□□ 2.2
PARP1-210ENST00000629232 IL2RBP14784 551 aa28.78■■■□□ 2.2
PARP1-210ENST00000629232 KIF24Q5T7B8 1368 aa28.77■■■□□ 2.2
PARP1-210ENST00000629232 PTGER2P43116 358 aa28.77■■■□□ 2.2
PARP1-210ENST00000629232 FAM208AQ9UK61 1670 aaKnown RBP28.77■■■□□ 2.2
PARP1-210ENST00000629232 LTV1Q96GA3 475 aaPredicted RBP28.75■■■□□ 2.19
PARP1-210ENST00000629232 MTFR1LQ9H019 292 aa28.75■■■□□ 2.19
PARP1-210ENST00000629232 PANK3Q9H999 370 aa28.74■■■□□ 2.19
PARP1-210ENST00000629232 NHSQ6T4R5 1651 aa28.74■■■□□ 2.19
PARP1-210ENST00000629232 ACSBG1Q96GR2 724 aa28.73■■■□□ 2.19
PARP1-210ENST00000629232 FHDC1Q9C0D6 1143 aaPredicted RBP28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms