RNA–Protein interactions for RNA: ENST00000625581.2

SOX2-OT-237, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 495 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-237ENST00000625581 COG3Q96JB2 828 aa20.03■□□□□ 0.8
SOX2-OT-237ENST00000625581 GGNBP2Q9H3C7 697 aa20.03■□□□□ 0.8
SOX2-OT-237ENST00000625581 WNK3Q9BYP7 1800 aa20.03■□□□□ 0.8
SOX2-OT-237ENST00000625581 PEAK1Q9H792 1746 aa20.02■□□□□ 0.79
SOX2-OT-237ENST00000625581 ZBTB7CA1YPR0 619 aa20.01■□□□□ 0.79
SOX2-OT-237ENST00000625581 CGNL1Q0VF96 1302 aa20.01■□□□□ 0.79
SOX2-OT-237ENST00000625581 AXIN2Q9Y2T1 843 aa20■□□□□ 0.79
SOX2-OT-237ENST00000625581 SPATA31A5Q5VU36 1347 aa20■□□□□ 0.79
SOX2-OT-237ENST00000625581 SPATA31A7Q8IWB4 1347 aa20■□□□□ 0.79
SOX2-OT-237ENST00000625581 FAM208AQ9UK61 1670 aaKnown RBP19.98■□□□□ 0.79
SOX2-OT-237ENST00000625581 STRN4Q9NRL3 753 aa19.98■□□□□ 0.79
SOX2-OT-237ENST00000625581 MAP2P11137 1827 aaKnown RBP19.97■□□□□ 0.79
SOX2-OT-237ENST00000625581 FBLN1P23142 703 aa19.97■□□□□ 0.79
SOX2-OT-237ENST00000625581 ZEB1P37275 1124 aaPredicted RBP19.97■□□□□ 0.79
SOX2-OT-237ENST00000625581 LARP1Q6PKG0 1096 aaKnown RBP19.97■□□□□ 0.79
SOX2-OT-237ENST00000625581 SPATA31A1Q5TZJ5 1347 aa19.97■□□□□ 0.79
SOX2-OT-237ENST00000625581 NSD2O96028 1365 aa19.96■□□□□ 0.79
SOX2-OT-237ENST00000625581 CRB1P82279 1406 aa19.96■□□□□ 0.79
SOX2-OT-237ENST00000625581 CCDC9Q9Y3X0 531 aaKnown RBP19.96■□□□□ 0.79
SOX2-OT-237ENST00000625581 MAP3K19Q56UN5 1328 aa19.96■□□□□ 0.79
SOX2-OT-237ENST00000625581 BLMP54132 1417 aaPredicted RBP19.95■□□□□ 0.78
SOX2-OT-237ENST00000625581 RTL1A6NKG5 1358 aa19.95■□□□□ 0.78
SOX2-OT-237ENST00000625581 PARP4Q9UKK3 1724 aaKnown RBP19.94■□□□□ 0.78
SOX2-OT-237ENST00000625581 RGPD2P0DJD1 1756 aa19.94■□□□□ 0.78
SOX2-OT-237ENST00000625581 ONECUT3O60422 494 aaPredicted RBP19.94■□□□□ 0.78
SOX2-OT-237ENST00000625581 WDR17Q8IZU2 1322 aa19.94■□□□□ 0.78
SOX2-OT-237ENST00000625581 EP400Q96L91 3159 aa19.93■□□□□ 0.78
SOX2-OT-237ENST00000625581 EVA1CP58658 441 aa19.93■□□□□ 0.78
SOX2-OT-237ENST00000625581 ERBB3P21860 1342 aa19.93■□□□□ 0.78
SOX2-OT-237ENST00000625581 LRRC37A3O60309 1634 aa19.92■□□□□ 0.78
SOX2-OT-237ENST00000625581 PER1O15534 1290 aaPredicted RBP19.92■□□□□ 0.78
SOX2-OT-237ENST00000625581 RRS1Q15050 365 aaKnown RBP19.92■□□□□ 0.78
SOX2-OT-237ENST00000625581 AMER1Q5JTC6 1135 aaPredicted RBP19.92■□□□□ 0.78
SOX2-OT-237ENST00000625581 FAM98CQ17RN3 349 aaKnown RBP19.91■□□□□ 0.78
SOX2-OT-237ENST00000625581 IP6K1Q92551 441 aa19.91■□□□□ 0.78
SOX2-OT-237ENST00000625581 HOXC9P31274 260 aa19.9■□□□□ 0.78
SOX2-OT-237ENST00000625581 KNSTRNQ9Y448 316 aa19.9■□□□□ 0.78
SOX2-OT-237ENST00000625581 KIF24Q5T7B8 1368 aa19.89■□□□□ 0.77
SOX2-OT-237ENST00000625581 SMG6Q86US8 1419 aaKnown RBP19.89■□□□□ 0.77
SOX2-OT-237ENST00000625581 SEPT12Q8IYM1 358 aa19.89■□□□□ 0.77
SOX2-OT-237ENST00000625581 BARGINQ6ZT62 677 aa19.88■□□□□ 0.77
SOX2-OT-237ENST00000625581 USP35Q9P2H5 1018 aa19.88■□□□□ 0.77
SOX2-OT-237ENST00000625581 DISP2A7MBM2 1401 aa19.87■□□□□ 0.77
SOX2-OT-237ENST00000625581 FLT4P35916 1363 aa19.87■□□□□ 0.77
SOX2-OT-237ENST00000625581 TOM1L2Q6ZVM7 507 aa19.87■□□□□ 0.77
SOX2-OT-237ENST00000625581 TCP11L2Q8N4U5 519 aa19.87■□□□□ 0.77
SOX2-OT-237ENST00000625581 ANKRD24Q8TF21 1146 aa19.87■□□□□ 0.77
SOX2-OT-237ENST00000625581 EMILIN1Q9Y6C2 1016 aa19.87■□□□□ 0.77
SOX2-OT-237ENST00000625581 NPC1L1Q9UHC9 1359 aa19.86■□□□□ 0.77
SOX2-OT-237ENST00000625581 AMPHP49418 695 aa19.86■□□□□ 0.77
SOX2-OT-237ENST00000625581 THRAP3Q9Y2W1 955 aaKnown RBP19.86■□□□□ 0.77
SOX2-OT-237ENST00000625581 INSRP06213 1382 aa19.85■□□□□ 0.77
SOX2-OT-237ENST00000625581 CARD10Q9BWT7 1032 aa19.85■□□□□ 0.77
SOX2-OT-237ENST00000625581 CSB-PGBD3P0DP91 1061 aa19.84■□□□□ 0.77
SOX2-OT-237ENST00000625581 TNNT2P45379 298 aaPredicted RBP19.83■□□□□ 0.77
SOX2-OT-237ENST00000625581 POLKQ9UBT6 870 aa19.83■□□□□ 0.77
SOX2-OT-237ENST00000625581 A0A0G2JS52 829 aa19.82■□□□□ 0.76
SOX2-OT-237ENST00000625581 MYT1Q01538 1121 aa19.82■□□□□ 0.76
SOX2-OT-237ENST00000625581 HSP90AB2PQ58FF8 381 aa19.82■□□□□ 0.76
SOX2-OT-237ENST00000625581 MORC1Q86VD1 984 aa19.81■□□□□ 0.76
SOX2-OT-237ENST00000625581 LTV1Q96GA3 475 aaPredicted RBP19.81■□□□□ 0.76
SOX2-OT-237ENST00000625581 SHANK3Q9BYB0 1731 aa19.81■□□□□ 0.76
SOX2-OT-237ENST00000625581 KRT27Q7Z3Y8 459 aa19.8■□□□□ 0.76
SOX2-OT-237ENST00000625581 NLRP2Q9NX02 1062 aa19.8■□□□□ 0.76
SOX2-OT-237ENST00000625581 NCAPD2Q15021 1401 aa19.79■□□□□ 0.76
SOX2-OT-237ENST00000625581 CC2D1BQ5T0F9 858 aaKnown RBP19.79■□□□□ 0.76
SOX2-OT-237ENST00000625581 TNS2Q63HR2 1409 aa19.78■□□□□ 0.76
SOX2-OT-237ENST00000625581 RGPD1P0DJD0 1748 aa19.77■□□□□ 0.76
SOX2-OT-237ENST00000625581 TNS1Q9HBL0 1735 aaKnown RBP19.77■□□□□ 0.76
SOX2-OT-237ENST00000625581 PPM1GO15355 546 aaPredicted RBP19.77■□□□□ 0.76
SOX2-OT-237ENST00000625581 UPF1Q92900 1129 aaKnown RBP eCLIP19.77■□□□□ 0.76
SOX2-OT-237ENST00000625581 MEGF6O75095 1541 aa19.76■□□□□ 0.75
SOX2-OT-237ENST00000625581 SBF2Q86WG5 1849 aa19.76■□□□□ 0.75
SOX2-OT-237ENST00000625581 NBPF6Q5VWK0 638 aa19.75■□□□□ 0.75
SOX2-OT-237ENST00000625581 NBPF4Q96M43 638 aa19.75■□□□□ 0.75
SOX2-OT-237ENST00000625581 CDCA7Q9BWT1 371 aaPredicted RBP19.75■□□□□ 0.75
SOX2-OT-237ENST00000625581 FAM182BQ5T319 152 aa19.74■□□□□ 0.75
SOX2-OT-237ENST00000625581 PKD1L3Q7Z443 1732 aa19.73■□□□□ 0.75
SOX2-OT-237ENST00000625581 COL3A1P02461 1466 aaPredicted RBP19.73■□□□□ 0.75
SOX2-OT-237ENST00000625581 OVOS2A0A0G2JMS6 1433 aa19.72■□□□□ 0.75
SOX2-OT-237ENST00000625581 IL2RBP14784 551 aa19.72■□□□□ 0.75
SOX2-OT-237ENST00000625581 USHBP1Q8N6Y0 703 aa19.72■□□□□ 0.75
SOX2-OT-237ENST00000625581 CNGB1Q14028 1251 aaPredicted RBP19.71■□□□□ 0.75
SOX2-OT-237ENST00000625581 EIF4A2Q14240 407 aaKnown RBP19.71■□□□□ 0.75
SOX2-OT-237ENST00000625581 DDB1Q16531 1140 aa19.71■□□□□ 0.75
SOX2-OT-237ENST00000625581 DDX10Q13206 875 aaKnown RBP19.69■□□□□ 0.74
SOX2-OT-237ENST00000625581 PDE3BQ13370 1112 aa19.69■□□□□ 0.74
SOX2-OT-237ENST00000625581 MTHFSP49914 203 aa19.68■□□□□ 0.74
SOX2-OT-237ENST00000625581 EYA1Q99502 592 aa19.68■□□□□ 0.74
SOX2-OT-237ENST00000625581 PARD3Q8TEW0 1356 aa19.68■□□□□ 0.74
SOX2-OT-237ENST00000625581 BCL9O00512 1426 aa19.68■□□□□ 0.74
SOX2-OT-237ENST00000625581 MARCH10Q8NA82 808 aaPredicted RBP19.67■□□□□ 0.74
SOX2-OT-237ENST00000625581 NHSQ6T4R5 1651 aa19.67■□□□□ 0.74
SOX2-OT-237ENST00000625581 IGSF1Q8N6C5 1336 aa19.67■□□□□ 0.74
SOX2-OT-237ENST00000625581 EXOC5O00471 708 aa19.65■□□□□ 0.74
SOX2-OT-237ENST00000625581 FAM196AQ6ZSG2 479 aa19.65■□□□□ 0.74
SOX2-OT-237ENST00000625581 DOT1LQ8TEK3 1739 aa19.65■□□□□ 0.74
SOX2-OT-237ENST00000625581 IL13P35225 146 aa19.64■□□□□ 0.73
SOX2-OT-237ENST00000625581 PPP2R1AP30153 589 aa19.62■□□□□ 0.73
SOX2-OT-237ENST00000625581 CCDC125Q86Z20 511 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms