RNA–Protein interactions for RNA: ENST00000623652.1

PPM1F-210, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 5

Gene PPM1F, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-210ENST00000623652 NOLC1Q14978 699 aaKnown RBP eCLIP11.08□□□□□ -0.64
PPM1F-210ENST00000623652 CCDC27Q2M243 656 aa11.08□□□□□ -0.64
PPM1F-210ENST00000623652 CFAP70Q5T0N1 1121 aa11.08□□□□□ -0.64
PPM1F-210ENST00000623652 TTC12Q9H892 705 aaPredicted RBP11.08□□□□□ -0.64
PPM1F-210ENST00000623652 MYO5CQ9NQX4 1742 aa11.08□□□□□ -0.64
PPM1F-210ENST00000623652 SLC12A5Q9H2X9 1139 aa11.08□□□□□ -0.64
PPM1F-210ENST00000623652 LETM1O95202 739 aaPredicted RBP11.08□□□□□ -0.64
PPM1F-210ENST00000623652 PRIMPOLQ96LW4 560 aa11.08□□□□□ -0.64
PPM1F-210ENST00000623652 CYP2E1P05181 493 aaPredicted RBP11.07□□□□□ -0.64
PPM1F-210ENST00000623652 PDCL2Q8N4E4 241 aa11.07□□□□□ -0.64
PPM1F-210ENST00000623652 TSPY26PQ9H489 355 aa11.07□□□□□ -0.64
PPM1F-210ENST00000623652 TEX2Q8IWB9 1127 aa11.06□□□□□ -0.64
PPM1F-210ENST00000623652 CGNQ9P2M7 1197 aaKnown RBP11.06□□□□□ -0.64
PPM1F-210ENST00000623652 ST18O60284 1047 aa11.06□□□□□ -0.64
PPM1F-210ENST00000623652 CT47B1P0C2W7 299 aaPredicted RBP11.06□□□□□ -0.64
PPM1F-210ENST00000623652 CARMIL2Q6F5E8 1435 aa11.06□□□□□ -0.64
PPM1F-210ENST00000623652 NSD3Q9BZ95 1437 aa11.06□□□□□ -0.64
PPM1F-210ENST00000623652 CWC22Q9HCG8 908 aaKnown RBP11.06□□□□□ -0.64
PPM1F-210ENST00000623652 USP25Q9UHP3 1055 aa11.06□□□□□ -0.64
PPM1F-210ENST00000623652 ZDHHC9Q9Y397 364 aa11.06□□□□□ -0.64
PPM1F-210ENST00000623652 U2AF2P26368 475 aaKnown RBP eCLIP11.06□□□□□ -0.64
PPM1F-210ENST00000623652 ZNF771Q7L3S4 317 aaPredicted RBP11.06□□□□□ -0.64
PPM1F-210ENST00000623652 BCL2L12Q9HB09 334 aa11.06□□□□□ -0.64
PPM1F-210ENST00000623652 GCC1Q96CN9 775 aa11.05□□□□□ -0.64
PPM1F-210ENST00000623652 PIBF1Q8WXW3 757 aa11.05□□□□□ -0.64
PPM1F-210ENST00000623652 CCDC9Q9Y3X0 531 aaKnown RBP11.05□□□□□ -0.64
PPM1F-210ENST00000623652 MBD3O95983 291 aa11.04□□□□□ -0.64
PPM1F-210ENST00000623652 NOL8Q76FK4 1167 aaKnown RBP11.04□□□□□ -0.64
PPM1F-210ENST00000623652 GDPD2Q9HCC8 539 aa11.04□□□□□ -0.64
PPM1F-210ENST00000623652 FBXO3Q9UK99 471 aa11.04□□□□□ -0.64
PPM1F-210ENST00000623652 KANK1Q14678 1352 aa11.04□□□□□ -0.64
PPM1F-210ENST00000623652 APBB1O00213 710 aa11.04□□□□□ -0.64
PPM1F-210ENST00000623652 GSPT1P15170 499 aaKnown RBP11.04□□□□□ -0.64
PPM1F-210ENST00000623652 IQSEC2Q5JU85 1478 aa11.03□□□□□ -0.64
PPM1F-210ENST00000623652 MYOM1P52179 1685 aa11.03□□□□□ -0.64
PPM1F-210ENST00000623652 TMPOP42166 694 aaKnown RBP11.03□□□□□ -0.64
PPM1F-210ENST00000623652 USP26Q9BXU7 913 aa11.03□□□□□ -0.64
PPM1F-210ENST00000623652 ELL2O00472 640 aaPredicted RBP11.02□□□□□ -0.64
PPM1F-210ENST00000623652 CHAF1AQ13111 956 aaPredicted RBP11.02□□□□□ -0.64
PPM1F-210ENST00000623652 SYAP1Q96A49 352 aaPredicted RBP11.02□□□□□ -0.64
PPM1F-210ENST00000623652 AFAP1Q8N556 730 aa11.02□□□□□ -0.65
PPM1F-210ENST00000623652 ZNF526Q8TF50 670 aaPredicted RBP11.02□□□□□ -0.65
PPM1F-210ENST00000623652 ZNF592Q92610 1267 aa11.02□□□□□ -0.65
PPM1F-210ENST00000623652 RNF17Q9BXT8 1623 aaKnown RBP11.02□□□□□ -0.65
PPM1F-210ENST00000623652 PPIP5K1Q6PFW1 1433 aa11.02□□□□□ -0.65
PPM1F-210ENST00000623652 ADCY5O95622 1261 aa11.02□□□□□ -0.65
PPM1F-210ENST00000623652 GTF2F1P35269 517 aaKnown RBP eCLIP11.02□□□□□ -0.65
PPM1F-210ENST00000623652 ZNF428Q96B54 188 aa11.02□□□□□ -0.65
PPM1F-210ENST00000623652 KDM5AP29375 1690 aaKnown RBP11.01□□□□□ -0.65
PPM1F-210ENST00000623652 ZBTB7BO15156 539 aaPredicted RBP11.01□□□□□ -0.65
PPM1F-210ENST00000623652 SOX12O15370 315 aa11.01□□□□□ -0.65
PPM1F-210ENST00000623652 C16orf71Q8IYS4 520 aaPredicted RBP11.01□□□□□ -0.65
PPM1F-210ENST00000623652 TRIM35Q9UPQ4 493 aa11.01□□□□□ -0.65
PPM1F-210ENST00000623652 TRAK1Q9UPV9 953 aa11.01□□□□□ -0.65
PPM1F-210ENST00000623652 ERVK-7P63135 1459 aa11.01□□□□□ -0.65
PPM1F-210ENST00000623652 TMEM51Q9NW97 253 aa11.01□□□□□ -0.65
PPM1F-210ENST00000623652 INTS3Q68E01 1043 aaKnown RBP11□□□□□ -0.65
PPM1F-210ENST00000623652 SIRT2Q8IXJ6 389 aa11□□□□□ -0.65
PPM1F-210ENST00000623652 IQGAP1P46940 1657 aa11□□□□□ -0.65
PPM1F-210ENST00000623652 RIOK3O14730 519 aaKnown RBP11□□□□□ -0.65
PPM1F-210ENST00000623652 NEK4P51957 841 aa11□□□□□ -0.65
PPM1F-210ENST00000623652 NUTM2DQ5VT03 806 aaPredicted RBP11□□□□□ -0.65
PPM1F-210ENST00000623652 FAM43BQ6ZT52 329 aaPredicted RBP11□□□□□ -0.65
PPM1F-210ENST00000623652 HCLS1P14317 486 aaPredicted RBP11□□□□□ -0.65
PPM1F-210ENST00000623652 FKBP5Q13451 457 aaPredicted RBP11□□□□□ -0.65
PPM1F-210ENST00000623652 PLEKHM2Q8IWE5 1019 aa11□□□□□ -0.65
PPM1F-210ENST00000623652 ARHGAP31Q2M1Z3 1444 aa10.99□□□□□ -0.65
PPM1F-210ENST00000623652 ATP10BO94823 1461 aa10.99□□□□□ -0.65
PPM1F-210ENST00000623652 GADD45BO75293 160 aaPredicted RBP10.99□□□□□ -0.65
PPM1F-210ENST00000623652 CASC1Q6TDU7 716 aa10.99□□□□□ -0.65
PPM1F-210ENST00000623652 MADDQ8WXG6 1647 aa10.99□□□□□ -0.65
PPM1F-210ENST00000623652 PHF14O94880 888 aa10.99□□□□□ -0.65
PPM1F-210ENST00000623652 DIAPH3Q9NSV4 1193 aa10.99□□□□□ -0.65
PPM1F-210ENST00000623652 SPC24Q8NBT2 197 aa10.98□□□□□ -0.65
PPM1F-210ENST00000623652 ADGRF5Q8IZF2 1346 aa10.98□□□□□ -0.65
PPM1F-210ENST00000623652 ABCC11Q96J66 1382 aa10.98□□□□□ -0.65
PPM1F-210ENST00000623652 OTUD7AQ8TE49 926 aaPredicted RBP10.98□□□□□ -0.65
PPM1F-210ENST00000623652 ARHGEF5Q12774 1597 aa10.98□□□□□ -0.65
PPM1F-210ENST00000623652 CFAP74Q9C0B2 1584 aa10.98□□□□□ -0.65
PPM1F-210ENST00000623652 NOS1P29475 1434 aa10.98□□□□□ -0.65
PPM1F-210ENST00000623652 ZNF518AQ6AHZ1 1483 aa10.98□□□□□ -0.65
PPM1F-210ENST00000623652 TTC22Q5TAA0 569 aa10.98□□□□□ -0.65
PPM1F-210ENST00000623652 TMX3Q96JJ7 454 aa10.98□□□□□ -0.65
PPM1F-210ENST00000623652 SHPRHQ149N8 1683 aa10.97□□□□□ -0.65
PPM1F-210ENST00000623652 ATAD2Q6PL18 1390 aa10.97□□□□□ -0.65
PPM1F-210ENST00000623652 SYCP2Q9BX26 1530 aa10.97□□□□□ -0.65
PPM1F-210ENST00000623652 CEP152O94986 1710 aa10.97□□□□□ -0.65
PPM1F-210ENST00000623652 SMARCA5O60264 1052 aaPredicted RBP10.97□□□□□ -0.65
PPM1F-210ENST00000623652 SAFB2Q14151 953 aaKnown RBP eCLIP10.97□□□□□ -0.65
PPM1F-210ENST00000623652 SDSP20132 328 aa10.96□□□□□ -0.65
PPM1F-210ENST00000623652 FAM184AQ8NB25 1140 aa10.96□□□□□ -0.65
PPM1F-210ENST00000623652 ATP10AO60312 1499 aa10.96□□□□□ -0.65
PPM1F-210ENST00000623652 REC8O95072 547 aa10.96□□□□□ -0.66
PPM1F-210ENST00000623652 TAF3Q5VWG9 929 aa10.96□□□□□ -0.66
PPM1F-210ENST00000623652 ERCC6L2Q5T890 1561 aa10.96□□□□□ -0.66
PPM1F-210ENST00000623652 SAMD9LQ8IVG5 1584 aa10.96□□□□□ -0.66
PPM1F-210ENST00000623652 CD109Q6YHK3 1445 aa10.96□□□□□ -0.66
PPM1F-210ENST00000623652 KIF3BO15066 747 aa10.96□□□□□ -0.66
PPM1F-210ENST00000623652 ALDH1L2Q3SY69 923 aa10.96□□□□□ -0.66
PPM1F-210ENST00000623652 USP48Q86UV5 1035 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms