RNA–Protein interactions for RNA: ENST00000619368.4

RDM1-225, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 506 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-225ENST00000619368 WDR17Q8IZU2 1322 aa12.96□□□□□ -0.33
RDM1-225ENST00000619368 SOX12O15370 315 aa12.96□□□□□ -0.33
RDM1-225ENST00000619368 DDB1Q16531 1140 aa12.96□□□□□ -0.33
RDM1-225ENST00000619368 RGPD3A6NKT7 1758 aaPredicted RBP12.96□□□□□ -0.34
RDM1-225ENST00000619368 RGPD4Q7Z3J3 1758 aa12.96□□□□□ -0.34
RDM1-225ENST00000619368 OVOS2A0A0G2JMS6 1433 aa12.96□□□□□ -0.34
RDM1-225ENST00000619368 OVOS2A0A0J9YW53 1432 aa12.96□□□□□ -0.34
RDM1-225ENST00000619368 OVOS2Q6IE36 1432 aa12.96□□□□□ -0.34
RDM1-225ENST00000619368 NFAT5O94916 1531 aa12.95□□□□□ -0.34
RDM1-225ENST00000619368 NBPF14Q5TI25 921 aa12.95□□□□□ -0.34
RDM1-225ENST00000619368 PTF1AQ7RTS3 328 aa12.95□□□□□ -0.34
RDM1-225ENST00000619368 KTN1Q86UP2 1357 aaKnown RBP12.94□□□□□ -0.34
RDM1-225ENST00000619368 TTC21AQ8NDW8 1320 aa12.94□□□□□ -0.34
RDM1-225ENST00000619368 MARCH10Q8NA82 808 aaPredicted RBP12.94□□□□□ -0.34
RDM1-225ENST00000619368 KCNH5Q8NCM2 988 aa12.94□□□□□ -0.34
RDM1-225ENST00000619368 LTN1O94822 1766 aa12.94□□□□□ -0.34
RDM1-225ENST00000619368 C11orf95C9JLR9 678 aaPredicted RBP12.93□□□□□ -0.34
RDM1-225ENST00000619368 USP54Q70EL1 1684 aa12.93□□□□□ -0.34
RDM1-225ENST00000619368 KAT6BQ8WYB5 2073 aa12.92□□□□□ -0.34
RDM1-225ENST00000619368 PLSCR1O15162 318 aa12.92□□□□□ -0.34
RDM1-225ENST00000619368 CARD10Q9BWT7 1032 aa12.92□□□□□ -0.34
RDM1-225ENST00000619368 CD163L1Q9NR16 1453 aa12.91□□□□□ -0.34
RDM1-225ENST00000619368 CSB-PGBD3P0DP91 1061 aa12.91□□□□□ -0.34
RDM1-225ENST00000619368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.91□□□□□ -0.34
RDM1-225ENST00000619368 CDCA7Q9BWT1 371 aaPredicted RBP12.91□□□□□ -0.34
RDM1-225ENST00000619368 BCL11BQ9C0K0 894 aaPredicted RBP12.91□□□□□ -0.34
RDM1-225ENST00000619368 SBNO2Q9Y2G9 1366 aa12.91□□□□□ -0.34
RDM1-225ENST00000619368 NME9Q86XW9 330 aa12.9□□□□□ -0.34
RDM1-225ENST00000619368 PROM2Q8N271 834 aa12.9□□□□□ -0.34
RDM1-225ENST00000619368 CARD11Q9BXL7 1154 aa12.9□□□□□ -0.34
RDM1-225ENST00000619368 CASZ1Q86V15 1759 aa12.89□□□□□ -0.35
RDM1-225ENST00000619368 BCL9O00512 1426 aa12.89□□□□□ -0.35
RDM1-225ENST00000619368 ABCC6O95255 1503 aa12.89□□□□□ -0.35
RDM1-225ENST00000619368 USP31Q70CQ4 1352 aa12.89□□□□□ -0.35
RDM1-225ENST00000619368 EXOC5O00471 708 aa12.88□□□□□ -0.35
RDM1-225ENST00000619368 KCNQ2O43526 872 aa12.88□□□□□ -0.35
RDM1-225ENST00000619368 TMC1Q8TDI8 760 aa12.88□□□□□ -0.35
RDM1-225ENST00000619368 SLC12A5Q9H2X9 1139 aa12.88□□□□□ -0.35
RDM1-225ENST00000619368 SPON1Q9HCB6 807 aa12.88□□□□□ -0.35
RDM1-225ENST00000619368 ANO8Q9HCE9 1232 aaPredicted RBP12.88□□□□□ -0.35
RDM1-225ENST00000619368 CCDC7Q96M83 1385 aa12.87□□□□□ -0.35
RDM1-225ENST00000619368 PDGFDQ9GZP0 370 aaPredicted RBP12.87□□□□□ -0.35
RDM1-225ENST00000619368 TNS2Q63HR2 1409 aa12.86□□□□□ -0.35
RDM1-225ENST00000619368 NHSQ6T4R5 1651 aa12.86□□□□□ -0.35
RDM1-225ENST00000619368 HDGFL2Q7Z4V5 671 aaPredicted RBP12.85□□□□□ -0.35
RDM1-225ENST00000619368 NLRP2Q9NX02 1062 aa12.85□□□□□ -0.35
RDM1-225ENST00000619368 PPP1R1BQ9UD71 204 aaPredicted RBP12.85□□□□□ -0.35
RDM1-225ENST00000619368 ERBB3P21860 1342 aa12.85□□□□□ -0.35
RDM1-225ENST00000619368 TONSLQ96HA7 1378 aa12.84□□□□□ -0.35
RDM1-225ENST00000619368 BTAF1O14981 1849 aa12.84□□□□□ -0.35
RDM1-225ENST00000619368 TXNRD1Q16881 649 aa12.84□□□□□ -0.35
RDM1-225ENST00000619368 EDC4Q6P2E9 1401 aaKnown RBP12.84□□□□□ -0.35
RDM1-225ENST00000619368 A0A1W2PP64 1363 aa12.83□□□□□ -0.36
RDM1-225ENST00000619368 ANKRD24Q8TF21 1146 aa12.83□□□□□ -0.36
RDM1-225ENST00000619368 RGPD2P0DJD1 1756 aa12.83□□□□□ -0.36
RDM1-225ENST00000619368 MYOM1P52179 1685 aa12.83□□□□□ -0.36
RDM1-225ENST00000619368 ZBTB7AO95365 584 aa12.82□□□□□ -0.36
RDM1-225ENST00000619368 IL2RBP14784 551 aa12.82□□□□□ -0.36
RDM1-225ENST00000619368 ACSBG1Q96GR2 724 aa12.82□□□□□ -0.36
RDM1-225ENST00000619368 TERF2IPQ9NYB0 399 aa12.82□□□□□ -0.36
RDM1-225ENST00000619368 PUS7Q96PZ0 661 aaKnown RBP12.81□□□□□ -0.36
RDM1-225ENST00000619368 TESK2Q96S53 571 aa12.81□□□□□ -0.36
RDM1-225ENST00000619368 NINLQ9Y2I6 1382 aa12.81□□□□□ -0.36
RDM1-225ENST00000619368 FAM208AQ9UK61 1670 aaKnown RBP12.8□□□□□ -0.36
RDM1-225ENST00000619368 ST20-MTHFSA0A0A6YYL1 179 aa12.8□□□□□ -0.36
RDM1-225ENST00000619368 SLC15A2Q16348 729 aa12.8□□□□□ -0.36
RDM1-225ENST00000619368 STK32BQ9NY57 414 aa12.8□□□□□ -0.36
RDM1-225ENST00000619368 ATF5Q9Y2D1 282 aaPredicted RBP12.8□□□□□ -0.36
RDM1-225ENST00000619368 PAPPAQ13219 1627 aa12.8□□□□□ -0.36
RDM1-225ENST00000619368 PTGER2P43116 358 aa12.79□□□□□ -0.36
RDM1-225ENST00000619368 IP6K1Q92551 441 aa12.79□□□□□ -0.36
RDM1-225ENST00000619368 FBLN1P23142 703 aa12.78□□□□□ -0.36
RDM1-225ENST00000619368 YY1P25490 414 aa12.78□□□□□ -0.36
RDM1-225ENST00000619368 LTV1Q96GA3 475 aaPredicted RBP12.78□□□□□ -0.36
RDM1-225ENST00000619368 SHANK3Q9BYB0 1731 aa12.77□□□□□ -0.36
RDM1-225ENST00000619368 DDX54Q8TDD1 881 aaKnown RBP12.76□□□□□ -0.37
RDM1-225ENST00000619368 MAP3K19Q56UN5 1328 aa12.76□□□□□ -0.37
RDM1-225ENST00000619368 DCAF8L1A6NGE4 600 aa12.75□□□□□ -0.37
RDM1-225ENST00000619368 HOXC9P31274 260 aa12.75□□□□□ -0.37
RDM1-225ENST00000619368 DOT1LQ8TEK3 1739 aa12.75□□□□□ -0.37
RDM1-225ENST00000619368 COG3Q96JB2 828 aa12.75□□□□□ -0.37
RDM1-225ENST00000619368 TUBGCP6Q96RT7 1819 aa12.75□□□□□ -0.37
RDM1-225ENST00000619368 SGIP1Q9BQI5 828 aa12.75□□□□□ -0.37
RDM1-225ENST00000619368 LRRC4BQ9NT99 713 aa12.75□□□□□ -0.37
RDM1-225ENST00000619368 QSER1Q2KHR3 1735 aa12.74□□□□□ -0.37
RDM1-225ENST00000619368 ZNF827Q17R98 1081 aa12.74□□□□□ -0.37
RDM1-225ENST00000619368 MTFR1LQ9H019 292 aa12.74□□□□□ -0.37
RDM1-225ENST00000619368 CHD4Q14839 1912 aa12.74□□□□□ -0.37
RDM1-225ENST00000619368 LY75O60449 1722 aa12.74□□□□□ -0.37
RDM1-225ENST00000619368 ANKRD36BQ8N2N9 1353 aa12.73□□□□□ -0.37
RDM1-225ENST00000619368 AMPHP49418 695 aa12.73□□□□□ -0.37
RDM1-225ENST00000619368 SYT17Q9BSW7 474 aa12.73□□□□□ -0.37
RDM1-225ENST00000619368 FHDC1Q9C0D6 1143 aaPredicted RBP12.73□□□□□ -0.37
RDM1-225ENST00000619368 KIF20BQ96Q89 1820 aa12.73□□□□□ -0.37
RDM1-225ENST00000619368 UTRNP46939 3433 aa12.72□□□□□ -0.37
RDM1-225ENST00000619368 FYB1O15117 783 aa12.72□□□□□ -0.37
RDM1-225ENST00000619368 COL24A1Q17RW2 1714 aa12.71□□□□□ -0.37
RDM1-225ENST00000619368 SLC24A1O60721 1099 aa12.71□□□□□ -0.37
RDM1-225ENST00000619368 PRIM1P49642 420 aaKnown RBP12.71□□□□□ -0.37
RDM1-225ENST00000619368 KCNQ4P56696 695 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms