RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 GGNBP2Q9H3C7 697 aa21.46■■□□□ 1.03
RPP40-207ENST00000618533 WASHC2AQ641Q2 1341 aa21.46■■□□□ 1.03
RPP40-207ENST00000618533 CCDC9Q9Y3X0 531 aaKnown RBP21.45■■□□□ 1.02
RPP40-207ENST00000618533 RGPD5Q99666 1765 aa21.45■■□□□ 1.02
RPP40-207ENST00000618533 ZBTB7CA1YPR0 619 aa21.44■■□□□ 1.02
RPP40-207ENST00000618533 SPATA31A5Q5VU36 1347 aa21.44■■□□□ 1.02
RPP40-207ENST00000618533 SPATA31A7Q8IWB4 1347 aa21.44■■□□□ 1.02
RPP40-207ENST00000618533 RGS12O14924 1447 aa21.44■■□□□ 1.02
RPP40-207ENST00000618533 STRN4Q9NRL3 753 aa21.43■■□□□ 1.02
RPP40-207ENST00000618533 KNSTRNQ9Y448 316 aa21.43■■□□□ 1.02
RPP40-207ENST00000618533 BLMP54132 1417 aaPredicted RBP21.42■■□□□ 1.02
RPP40-207ENST00000618533 KIF24Q5T7B8 1368 aa21.42■■□□□ 1.02
RPP40-207ENST00000618533 CRB1P82279 1406 aa21.41■■□□□ 1.02
RPP40-207ENST00000618533 RTL1A6NKG5 1358 aa21.41■■□□□ 1.02
RPP40-207ENST00000618533 SPATA31A1Q5TZJ5 1347 aa21.41■■□□□ 1.02
RPP40-207ENST00000618533 ONECUT3O60422 494 aaPredicted RBP21.41■■□□□ 1.02
RPP40-207ENST00000618533 FAM208AQ9UK61 1670 aaKnown RBP21.4■■□□□ 1.02
RPP40-207ENST00000618533 WDR17Q8IZU2 1322 aa21.39■■□□□ 1.01
RPP40-207ENST00000618533 AXIN2Q9Y2T1 843 aa21.39■■□□□ 1.01
RPP40-207ENST00000618533 THRAP3Q9Y2W1 955 aaKnown RBP21.39■■□□□ 1.01
RPP40-207ENST00000618533 MAP3K19Q56UN5 1328 aa21.38■■□□□ 1.01
RPP40-207ENST00000618533 LARP1Q6PKG0 1096 aaKnown RBP21.38■■□□□ 1.01
RPP40-207ENST00000618533 IP6K1Q92551 441 aa21.38■■□□□ 1.01
RPP40-207ENST00000618533 THSD7AQ9UPZ6 1657 aa21.37■■□□□ 1.01
RPP40-207ENST00000618533 MAP2P11137 1827 aaKnown RBP21.37■■□□□ 1.01
RPP40-207ENST00000618533 BARGINQ6ZT62 677 aa21.37■■□□□ 1.01
RPP40-207ENST00000618533 AMPHP49418 695 aa21.36■■□□□ 1.01
RPP40-207ENST00000618533 TCP11L2Q8N4U5 519 aa21.36■■□□□ 1.01
RPP40-207ENST00000618533 NPC1L1Q9UHC9 1359 aa21.36■■□□□ 1.01
RPP40-207ENST00000618533 ERBB3P21860 1342 aa21.35■■□□□ 1.01
RPP40-207ENST00000618533 PER1O15534 1290 aaPredicted RBP21.35■■□□□ 1.01
RPP40-207ENST00000618533 TOM1L2Q6ZVM7 507 aa21.35■■□□□ 1.01
RPP40-207ENST00000618533 BRWD3Q6RI45 1802 aa21.34■■□□□ 1.01
RPP40-207ENST00000618533 HOXC9P31274 260 aa21.34■■□□□ 1.01
RPP40-207ENST00000618533 AMER1Q5JTC6 1135 aaPredicted RBP21.34■■□□□ 1.01
RPP40-207ENST00000618533 FLT4P35916 1363 aa21.34■■□□□ 1.01
RPP40-207ENST00000618533 WNK3Q9BYP7 1800 aa21.34■■□□□ 1.01
RPP40-207ENST00000618533 CSB-PGBD3P0DP91 1061 aa21.33■■□□□ 1.01
RPP40-207ENST00000618533 FAM98CQ17RN3 349 aaKnown RBP21.33■■□□□ 1.01
RPP40-207ENST00000618533 SEPT12Q8IYM1 358 aa21.33■■□□□ 1.01
RPP40-207ENST00000618533 CARD10Q9BWT7 1032 aa21.33■■□□□ 1.01
RPP40-207ENST00000618533 RRS1Q15050 365 aaKnown RBP21.32■■□□□ 1
RPP40-207ENST00000618533 PARP4Q9UKK3 1724 aaKnown RBP21.32■■□□□ 1
RPP40-207ENST00000618533 ANKRD24Q8TF21 1146 aa21.31■■□□□ 1
RPP40-207ENST00000618533 CDCA7Q9BWT1 371 aaPredicted RBP21.31■■□□□ 1
RPP40-207ENST00000618533 PEAK1Q9H792 1746 aa21.31■■□□□ 1
RPP40-207ENST00000618533 INSRP06213 1382 aa21.31■■□□□ 1
RPP40-207ENST00000618533 SMG6Q86US8 1419 aaKnown RBP21.3■■□□□ 1
RPP40-207ENST00000618533 FBLN1P23142 703 aa21.3■■□□□ 1
RPP40-207ENST00000618533 MORC1Q86VD1 984 aa21.3■■□□□ 1
RPP40-207ENST00000618533 USP35Q9P2H5 1018 aa21.3■■□□□ 1
RPP40-207ENST00000618533 A0A0G2JS52 829 aa21.29■■□□□ 1
RPP40-207ENST00000618533 MYT1Q01538 1121 aa21.29■■□□□ 1
RPP40-207ENST00000618533 KRT27Q7Z3Y8 459 aa21.26■□□□□ 0.99
RPP40-207ENST00000618533 NLRP2Q9NX02 1062 aa21.26■□□□□ 0.99
RPP40-207ENST00000618533 POLKQ9UBT6 870 aa21.26■□□□□ 0.99
RPP40-207ENST00000618533 EMILIN1Q9Y6C2 1016 aa21.26■□□□□ 0.99
RPP40-207ENST00000618533 DISP2A7MBM2 1401 aa21.24■□□□□ 0.99
RPP40-207ENST00000618533 LRRC37A3O60309 1634 aa21.23■□□□□ 0.99
RPP40-207ENST00000618533 TNNT2P45379 298 aaPredicted RBP21.23■□□□□ 0.99
RPP40-207ENST00000618533 HSP90AB2PQ58FF8 381 aa21.23■□□□□ 0.99
RPP40-207ENST00000618533 RGPD2P0DJD1 1756 aa21.23■□□□□ 0.99
RPP40-207ENST00000618533 PPM1GO15355 546 aaPredicted RBP21.22■□□□□ 0.99
RPP40-207ENST00000618533 LTV1Q96GA3 475 aaPredicted RBP21.22■□□□□ 0.99
RPP40-207ENST00000618533 CC2D1BQ5T0F9 858 aaKnown RBP21.21■□□□□ 0.99
RPP40-207ENST00000618533 PDE3BQ13370 1112 aa21.2■□□□□ 0.98
RPP40-207ENST00000618533 IL2RBP14784 551 aa21.19■□□□□ 0.98
RPP40-207ENST00000618533 DDB1Q16531 1140 aa21.19■□□□□ 0.98
RPP40-207ENST00000618533 CCDC125Q86Z20 511 aa21.18■□□□□ 0.98
RPP40-207ENST00000618533 UPF1Q92900 1129 aaKnown RBP eCLIP21.18■□□□□ 0.98
RPP40-207ENST00000618533 TNS2Q63HR2 1409 aa21.17■□□□□ 0.98
RPP40-207ENST00000618533 NCAPD2Q15021 1401 aa21.16■□□□□ 0.98
RPP40-207ENST00000618533 NBPF6Q5VWK0 638 aa21.16■□□□□ 0.98
RPP40-207ENST00000618533 NBPF4Q96M43 638 aa21.16■□□□□ 0.98
RPP40-207ENST00000618533 EXOC5O00471 708 aa21.15■□□□□ 0.98
RPP40-207ENST00000618533 FAM196AQ6ZSG2 479 aa21.15■□□□□ 0.98
RPP40-207ENST00000618533 OVOS2A0A0G2JMS6 1433 aa21.13■□□□□ 0.97
RPP40-207ENST00000618533 PLEKHG2Q9H7P9 1386 aa21.13■□□□□ 0.97
RPP40-207ENST00000618533 RGPD1P0DJD0 1748 aa21.13■□□□□ 0.97
RPP40-207ENST00000618533 EP400Q96L91 3159 aa21.13■□□□□ 0.97
RPP40-207ENST00000618533 BCL9O00512 1426 aa21.12■□□□□ 0.97
RPP40-207ENST00000618533 MTHFSP49914 203 aa21.12■□□□□ 0.97
RPP40-207ENST00000618533 EIF4A2Q14240 407 aaKnown RBP21.12■□□□□ 0.97
RPP40-207ENST00000618533 DDX10Q13206 875 aaKnown RBP21.11■□□□□ 0.97
RPP40-207ENST00000618533 RAPGEF4Q8WZA2 1011 aa21.11■□□□□ 0.97
RPP40-207ENST00000618533 MEGF6O75095 1541 aa21.09■□□□□ 0.97
RPP40-207ENST00000618533 ZNF316A6NFI3 1004 aaPredicted RBP21.09■□□□□ 0.97
RPP40-207ENST00000618533 EYA1Q99502 592 aa21.09■□□□□ 0.97
RPP40-207ENST00000618533 PARD3Q8TEW0 1356 aa21.09■□□□□ 0.97
RPP40-207ENST00000618533 SBF2Q86WG5 1849 aa21.08■□□□□ 0.97
RPP40-207ENST00000618533 IGSF1Q8N6C5 1336 aa21.08■□□□□ 0.97
RPP40-207ENST00000618533 TATP17735 454 aaPredicted RBP21.08■□□□□ 0.97
RPP40-207ENST00000618533 PKD1L3Q7Z443 1732 aa21.07■□□□□ 0.96
RPP40-207ENST00000618533 SF3B2Q13435 895 aaKnown RBP21.07■□□□□ 0.96
RPP40-207ENST00000618533 USHBP1Q8N6Y0 703 aa21.07■□□□□ 0.96
RPP40-207ENST00000618533 MARCH10Q8NA82 808 aaPredicted RBP21.07■□□□□ 0.96
RPP40-207ENST00000618533 SHANK3Q9BYB0 1731 aa21.07■□□□□ 0.96
RPP40-207ENST00000618533 CNGB1Q14028 1251 aaPredicted RBP21.06■□□□□ 0.96
RPP40-207ENST00000618533 FAM182BQ5T319 152 aa21.06■□□□□ 0.96
RPP40-207ENST00000618533 TNS1Q9HBL0 1735 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms