RNA–Protein interactions for RNA: ENST00000617999.4

UPK1A-204, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPK1A, Length 1,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-204ENST00000617999 ARHGEF25Q86VW2 580 aa20.56■□□□□ 0.88
UPK1A-204ENST00000617999 PPM1GO15355 546 aaPredicted RBP20.55■□□□□ 0.88
UPK1A-204ENST00000617999 BLMP54132 1417 aaPredicted RBP20.54■□□□□ 0.88
UPK1A-204ENST00000617999 NWD2Q9ULI1 1742 aa20.54■□□□□ 0.88
UPK1A-204ENST00000617999 ZBTB7CA1YPR0 619 aa20.54■□□□□ 0.88
UPK1A-204ENST00000617999 HOXC9P31274 260 aa20.54■□□□□ 0.88
UPK1A-204ENST00000617999 ZC3H6P61129 1189 aaKnown RBP20.54■□□□□ 0.88
UPK1A-204ENST00000617999 AMPHP49418 695 aa20.52■□□□□ 0.88
UPK1A-204ENST00000617999 HAP1P54257 671 aaPredicted RBP20.52■□□□□ 0.88
UPK1A-204ENST00000617999 HSP90AB2PQ58FF8 381 aa20.51■□□□□ 0.87
UPK1A-204ENST00000617999 CFAP53Q96M91 514 aa20.51■□□□□ 0.87
UPK1A-204ENST00000617999 WNK3Q9BYP7 1800 aa20.5■□□□□ 0.87
UPK1A-204ENST00000617999 COL5A2P05997 1499 aaPredicted RBP20.5■□□□□ 0.87
UPK1A-204ENST00000617999 CHRNA2Q15822 529 aa20.5■□□□□ 0.87
UPK1A-204ENST00000617999 IP6K1Q92551 441 aa20.49■□□□□ 0.87
UPK1A-204ENST00000617999 PRDM11Q9NQV5 511 aa20.49■□□□□ 0.87
UPK1A-204ENST00000617999 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.49■□□□□ 0.87
UPK1A-204ENST00000617999 EIF4A2Q14240 407 aaKnown RBP20.48■□□□□ 0.87
UPK1A-204ENST00000617999 FBXO41Q8TF61 875 aa20.48■□□□□ 0.87
UPK1A-204ENST00000617999 SPATA31A6Q5VVP1 1343 aa20.48■□□□□ 0.87
UPK1A-204ENST00000617999 PNISRQ8TF01 805 aaKnown RBP20.47■□□□□ 0.87
UPK1A-204ENST00000617999 NCAPD2Q15021 1401 aa20.46■□□□□ 0.87
UPK1A-204ENST00000617999 NUTM2BA6NNL0 878 aaPredicted RBP20.46■□□□□ 0.87
UPK1A-204ENST00000617999 NUTM2EB1AL46 878 aaPredicted RBP20.46■□□□□ 0.87
UPK1A-204ENST00000617999 DIAPH1O60610 1272 aaKnown RBP20.46■□□□□ 0.87
UPK1A-204ENST00000617999 IL13P35225 146 aa20.46■□□□□ 0.87
UPK1A-204ENST00000617999 NUTM2AQ8IVF1 878 aaPredicted RBP20.46■□□□□ 0.87
UPK1A-204ENST00000617999 AXIN2Q9Y2T1 843 aa20.46■□□□□ 0.87
UPK1A-204ENST00000617999 ERBB3P21860 1342 aa20.46■□□□□ 0.87
UPK1A-204ENST00000617999 SLIT2O94813 1529 aa20.45■□□□□ 0.86
UPK1A-204ENST00000617999 ADAMTS2O95450 1211 aa20.44■□□□□ 0.86
UPK1A-204ENST00000617999 LTV1Q96GA3 475 aaPredicted RBP20.43■□□□□ 0.86
UPK1A-204ENST00000617999 FAM83GA6ND36 823 aa20.42■□□□□ 0.86
UPK1A-204ENST00000617999 WDR43Q15061 677 aaKnown RBP eCLIP20.42■□□□□ 0.86
UPK1A-204ENST00000617999 FAM9BQ8IZU0 186 aa20.42■□□□□ 0.86
UPK1A-204ENST00000617999 IGSF1Q8N6C5 1336 aa20.42■□□□□ 0.86
UPK1A-204ENST00000617999 ANKRD24Q8TF21 1146 aa20.41■□□□□ 0.86
UPK1A-204ENST00000617999 PARP4Q9UKK3 1724 aaKnown RBP20.41■□□□□ 0.86
UPK1A-204ENST00000617999 U2SURPO15042 1029 aaKnown RBP20.4■□□□□ 0.86
UPK1A-204ENST00000617999 DLG5Q8TDM6 1919 aa20.39■□□□□ 0.86
UPK1A-204ENST00000617999 KDRP35968 1356 aa20.39■□□□□ 0.85
UPK1A-204ENST00000617999 PKD1L3Q7Z443 1732 aa20.39■□□□□ 0.85
UPK1A-204ENST00000617999 AEBP1Q8IUX7 1158 aa20.38■□□□□ 0.85
UPK1A-204ENST00000617999 ADAMTS8Q9UP79 889 aa20.38■□□□□ 0.85
UPK1A-204ENST00000617999 SHANK3Q9BYB0 1731 aa20.38■□□□□ 0.85
UPK1A-204ENST00000617999 U2AF1L5P0DN76 240 aaPredicted RBP20.37■□□□□ 0.85
UPK1A-204ENST00000617999 U2AF1Q01081 240 aaKnown RBP eCLIP20.37■□□□□ 0.85
UPK1A-204ENST00000617999 EYA1Q99502 592 aa20.37■□□□□ 0.85
UPK1A-204ENST00000617999 NUDCQ9Y266 331 aa20.37■□□□□ 0.85
UPK1A-204ENST00000617999 WDR17Q8IZU2 1322 aa20.36■□□□□ 0.85
UPK1A-204ENST00000617999 USHBP1Q8N6Y0 703 aa20.36■□□□□ 0.85
UPK1A-204ENST00000617999 BTG4Q9NY30 223 aa20.36■□□□□ 0.85
UPK1A-204ENST00000617999 HMOX1P09601 288 aa20.35■□□□□ 0.85
UPK1A-204ENST00000617999 RSPH6AQ9H0K4 717 aa20.35■□□□□ 0.85
UPK1A-204ENST00000617999 MEGF6O75095 1541 aa20.35■□□□□ 0.85
UPK1A-204ENST00000617999 BCL9LQ86UU0 1499 aa20.35■□□□□ 0.85
UPK1A-204ENST00000617999 CRB1P82279 1406 aa20.35■□□□□ 0.85
UPK1A-204ENST00000617999 VIRMAQ69YN4 1812 aaKnown RBP20.34■□□□□ 0.85
UPK1A-204ENST00000617999 NBPF6Q5VWK0 638 aa20.34■□□□□ 0.85
UPK1A-204ENST00000617999 CCDC146Q8IYE0 955 aa20.34■□□□□ 0.85
UPK1A-204ENST00000617999 NBPF4Q96M43 638 aa20.34■□□□□ 0.85
UPK1A-204ENST00000617999 C8orf37Q96NL8 207 aa20.34■□□□□ 0.85
UPK1A-204ENST00000617999 STRN4Q9NRL3 753 aa20.33■□□□□ 0.85
UPK1A-204ENST00000617999 CSB-PGBD3P0DP91 1061 aa20.32■□□□□ 0.84
UPK1A-204ENST00000617999 SULT6B1Q6IMI4 303 aa20.32■□□□□ 0.84
UPK1A-204ENST00000617999 LARP1Q6PKG0 1096 aaKnown RBP20.32■□□□□ 0.84
UPK1A-204ENST00000617999 LRRC37A3O60309 1634 aa20.31■□□□□ 0.84
UPK1A-204ENST00000617999 PRKAR2BP31323 418 aa20.31■□□□□ 0.84
UPK1A-204ENST00000617999 GLI3P10071 1580 aa20.3■□□□□ 0.84
UPK1A-204ENST00000617999 NLRP2Q9NX02 1062 aa20.3■□□□□ 0.84
UPK1A-204ENST00000617999 MEX3CQ5U5Q3 659 aaKnown RBP20.29■□□□□ 0.84
UPK1A-204ENST00000617999 PLEKHF1Q96S99 279 aa20.29■□□□□ 0.84
UPK1A-204ENST00000617999 DISP2A7MBM2 1401 aa20.28■□□□□ 0.84
UPK1A-204ENST00000617999 SENP3-EIF4A1A0A087X0R7 540 aa20.28■□□□□ 0.84
UPK1A-204ENST00000617999 THSD7AQ9UPZ6 1657 aa20.28■□□□□ 0.84
UPK1A-204ENST00000617999 TOM1L2Q6ZVM7 507 aa20.27■□□□□ 0.84
UPK1A-204ENST00000617999 FNBP4Q8N3X1 1017 aaPredicted RBP20.27■□□□□ 0.84
UPK1A-204ENST00000617999 YTHDC1Q96MU7 727 aaKnown RBP20.27■□□□□ 0.84
UPK1A-204ENST00000617999 OVOS2A0A0G2JMS6 1433 aa20.27■□□□□ 0.83
UPK1A-204ENST00000617999 AFF2P51816 1311 aa20.27■□□□□ 0.83
UPK1A-204ENST00000617999 FCHSD2O94868 740 aa20.26■□□□□ 0.83
UPK1A-204ENST00000617999 NGLY1Q96IV0 654 aa20.26■□□□□ 0.83
UPK1A-204ENST00000617999 ATRNO75882 1429 aa20.26■□□□□ 0.83
UPK1A-204ENST00000617999 EVA1CP58658 441 aa20.25■□□□□ 0.83
UPK1A-204ENST00000617999 RUNDC1Q96C34 613 aa20.25■□□□□ 0.83
UPK1A-204ENST00000617999 CARD10Q9BWT7 1032 aa20.25■□□□□ 0.83
UPK1A-204ENST00000617999 MAPK8IP3Q9UPT6 1336 aa20.25■□□□□ 0.83
UPK1A-204ENST00000617999 UNC5CLQ8IV45 518 aa20.24■□□□□ 0.83
UPK1A-204ENST00000617999 HNRNPUQ00839 825 aaKnown RBP eCLIP20.23■□□□□ 0.83
UPK1A-204ENST00000617999 PHACTR3Q96KR7 559 aa20.23■□□□□ 0.83
UPK1A-204ENST00000617999 ADAMTS7Q9UKP4 1686 aa20.22■□□□□ 0.83
UPK1A-204ENST00000617999 PLEKHG2Q9H7P9 1386 aa20.22■□□□□ 0.83
UPK1A-204ENST00000617999 APAF1O14727 1248 aa20.22■□□□□ 0.83
UPK1A-204ENST00000617999 SPATA31A1Q5TZJ5 1347 aa20.22■□□□□ 0.83
UPK1A-204ENST00000617999 SPATA31A5Q5VU36 1347 aa20.22■□□□□ 0.83
UPK1A-204ENST00000617999 SPATA31A7Q8IWB4 1347 aa20.22■□□□□ 0.83
UPK1A-204ENST00000617999 USP21Q9UK80 565 aa20.21■□□□□ 0.83
UPK1A-204ENST00000617999 TOGARAM1Q9Y4F4 1720 aa20.21■□□□□ 0.83
UPK1A-204ENST00000617999 SCN11AQ9UI33 1791 aa20.21■□□□□ 0.83
UPK1A-204ENST00000617999 TNS2Q63HR2 1409 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms